BAM-EspP complex structure with BamA-G431C and G781C/EspP-N1293C and A1043C mutations in nanodisc
Resolution: 3.4 Å
EM Method: Single-particle
Fitted PDBs: 7ye4
Q-score: 0.389
Shen C, Chang S, Luo Q, Chan KC, Zhang Z, Luo B, Xie T, Lu G, Zhu X, Wei X, Dong C, Zhou R, Zhang X, Tang X, Dong H
Nature (2023) 617 pp. 185-193 [ DOI: doi:10.1038/s41586-023-05988-8 Pubmed: 37100902 ]
- Outer membrane protein assembly factor bamb (41 kDa, Protein from Escherichia coli K-12)
- Outer membrane protein assembly factor bame (13 kDa, Protein from Escherichia coli K-12)
- Bam (Complex from Escherichia coli K-12)
- Espp (Complex from Escherichia coli O157:H7)
- Serine protease espp (38 kDa, Protein from Escherichia coli O157:H7)
- Bam-espp complex with bama-g431c and g781c/espp-n1293c and a1043c mutations in nanodisc (Complex)
- Outer membrane protein assembly factor bamd (27 kDa, Protein from Escherichia coli K-12)
- Outer membrane protein assembly factor bamc (36 kDa, Protein from Escherichia coli K-12)
- Outer membrane protein assembly factor bama (90 kDa, Protein from Escherichia coli K-12)
BAM-EspP complex structure with BamA-N427C/EspP-R1297C mutations in nanodisc
Resolution: 3.4 Å
EM Method: Single-particle
Fitted PDBs: 7ye6
Q-score: 0.275
Shen C, Chang S, Luo Q, Chan KC, Zhang Z, Luo B, Xie T, Lu G, Zhu X, Wei X, Dong C, Zhou R, Zhang X, Tang X, Dong H
Nature (2023) 617 pp. 185-193 [ DOI: doi:10.1038/s41586-023-05988-8 Pubmed: 37100902 ]
- Outer membrane protein assembly factor bamb (41 kDa, Protein from Escherichia coli K-12)
- Outer membrane protein assembly factor bame (13 kDa, Protein from Escherichia coli K-12)
- Bam (Complex from Escherichia coli K-12)
- Bam-espp complex structure with bama-n427c/espp-r1297c mutations in nanodisc (Complex)
- Espp (Complex from Escherichia coli O157:H7)
- Outer membrane protein assembly factor bama (90 kDa, Protein from Escherichia coli K-12)
- Outer membrane protein assembly factor bamd (27 kDa, Protein from Escherichia coli K-12)
- Outer membrane protein assembly factor bamc (36 kDa, Protein from Escherichia coli K-12)
- Serine protease espp (38 kDa, Protein from Escherichia coli O157:H7)
BAM-EspP complex structure with BamA-G431C/EspP-N1293C mutations in nanodisc
Resolution: 3.5 Å
EM Method: Single-particle
Fitted PDBs: 8bnz
Q-score: 0.337
Shen C, Chang S, Luo Q, Chan KC, Zhang Z, Luo B, Xie T, Lu G, Zhu X, Wei X, Dong C, Zhou R, Zhang X, Tang X, Dong H
Nature (2023) 617 pp. 185-193 [ DOI: doi:10.1038/s41586-023-05988-8 Pubmed: 37100902 ]
- Outer membrane protein assembly factor bamb (41 kDa, Protein from Escherichia coli K-12)
- Serine protease espp (38 kDa, Protein from Escherichia coli O157:H7)
- Outer membrane protein assembly factor bame (13 kDa, Protein from Escherichia coli K-12)
- Bam (Complex from Escherichia coli K-12)
- Outer membrane protein assembly factor bama (90 kDa, Protein from Escherichia coli K-12)
- Espp (Complex from Escherichia coli O157:H7)
- Bam-espp complex with bama-g431c/espp-n1293c mutations in nanodisc (Complex)
- Outer membrane protein assembly factor bamd (27 kDa, Protein from Escherichia coli K-12)
- Outer membrane protein assembly factor bamc (36 kDa, Protein from Escherichia coli K-12)
BAM-EspP complex structure with BamA-S425C/EspP-S1299C mutations in nanodisc
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 8bo2
Q-score: 0.333
Shen C, Chang S, Luo Q, Chan KC, Zhang Z, Luo B, Xie T, Lu G, Zhu X, Wei X, Dong C, Zhou R, Zhang X, Tang X, Dong H
Nature (2023) 617 pp. 185-193 [ DOI: doi:10.1038/s41586-023-05988-8 Pubmed: 37100902 ]
- Outer membrane protein assembly factor bamb (41 kDa, Protein from Escherichia coli K-12)
- Outer membrane protein assembly factor bame (13 kDa, Protein from Escherichia coli K-12)
- Bam (Complex from Escherichia coli K-12)
- Espp (Complex from Escherichia coli O157:H7)
- Outer membrane protein assembly factor bama (88 kDa, Protein from Escherichia coli K-12)
- Outer membrane protein assembly factor bamd (27 kDa, Protein from Escherichia coli K-12)
- Serine protease espp (38 kDa, Protein from Escherichia coli K-12)
- Outer membrane protein assembly factor bamc (36 kDa, Protein from Escherichia coli K-12)
- Bam-espp complex with bama-g431c/espp-n1293c mutations in nanodisc (Complex from Escherichia coli K-12)
LolCDE in complex with lipoprotein
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 7arh
Q-score: 0.379
Tang X, Chang S, Zhang K, Luo Q, Zhang Z, Wang T, Qiao W, Wang C, Shen C, Zhang Z, Zhu X, Wei X, Dong C, Zhang X, Dong H
Nat Struct Mol Biol (2021) 28 pp. 347-355 [ Pubmed: 33782615 DOI: doi:10.1038/s41594-021-00573-x ]
- (2s)-3-hydroxypropane-1,2-diyl dihexadecanoate (568 Da, Ligand)
- Palmitic acid (256 Da, Ligand)
- Lipoprotein-releasing system transmembrane protein lole (45 kDa, Protein from Escherichia coli (strain K12))
- Lpp (1 kDa, Protein from Escherichia coli K-12)
- Lipoprotein-releasing abc transporter permease subunit lolc (43 kDa, Protein from Escherichia coli (strain K12))
- Lolcde in complex with a lipoprotein (Complex from Escherichia coli)
- Lipoprotein-releasing system atp-binding protein lold (26 kDa, Protein from Escherichia coli (strain K12))
Resolution: 3.4 Å
EM Method: Single-particle
Fitted PDBs: 7ari
Q-score: 0.294
Tang X, Chang S, Zhang K, Luo Q, Zhang Z, Wang T, Qiao W, Wang C, Shen C, Zhang Z, Zhu X, Wei X, Dong C, Zhang X, Dong H
Nat Struct Mol Biol (2021) 28 pp. 347-355 [ Pubmed: 33782615 DOI: doi:10.1038/s41594-021-00573-x ]
- Lipoprotein-releasing abc transporter permease subunit lolc (43 kDa, Protein from Escherichia coli (strain K12))
- Lipoprotein-releasing system transmembrane protein lole (45 kDa, Protein from Escherichia coli (strain K12))
- Lolcde apo structure (Complex from Escherichia coli)
- Lipoprotein-releasing system atp-binding protein lold (26 kDa, Protein from Escherichia coli (strain K12))
LolCDE in complex with lipoprotein and AMPPNP complex undimerized form
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 7arj
Q-score: 0.394
Tang X, Chang S, Zhang K, Luo Q, Zhang Z, Wang T, Qiao W, Wang C, Shen C, Zhang Z, Zhu X, Wei X, Dong C, Zhang X, Dong H
Nat Struct Mol Biol (2021) 28 pp. 347-355 [ Pubmed: 33782615 DOI: doi:10.1038/s41594-021-00573-x ]
- Phosphoaminophosphonic acid-adenylate ester (506 Da, Ligand)
- (2s)-3-hydroxypropane-1,2-diyl dihexadecanoate (568 Da, Ligand)
- Palmitic acid (256 Da, Ligand)
- Lipoprotein-releasing system transmembrane protein lole (45 kDa, Protein from Escherichia coli (strain K12))
- Lpp (1 kDa, Protein from Escherichia coli K-12)
- Lipoprotein-releasing abc transporter permease subunit lolc (43 kDa, Protein from Escherichia coli (strain K12))
- Lipoprotein-releasing system atp-binding protein lold (26 kDa, Protein from Escherichia coli (strain K12))
- Lolcde in complex with lipoprotein and amppnp complex undimerized form (Complex from Escherichia coli)
- Magnesium ion (24 Da, Ligand)
LolCDE in complex with AMP-PNP in the closed NBD state
Resolution: 4.1 Å
EM Method: Single-particle
Fitted PDBs: 7ark
Q-score: 0.199
Tang X, Chang S, Zhang K, Luo Q, Zhang Z, Wang T, Qiao W, Wang C, Shen C, Zhang Z, Zhu X, Wei X, Dong C, Zhang X, Dong H
Nat Struct Mol Biol (2021) 28 pp. 347-355 [ Pubmed: 33782615 DOI: doi:10.1038/s41594-021-00573-x ]
- Phosphoaminophosphonic acid-adenylate ester (506 Da, Ligand)
- Lolcde in complex with amppnp dimerized form (Complex from Escherichia coli)
- Lipoprotein-releasing system transmembrane protein lole (45 kDa, Protein from Escherichia coli (strain K12))
- Lipoprotein-releasing abc transporter permease subunit lolc (43 kDa, Protein from Escherichia coli (strain K12))
- Lipoprotein-releasing system atp-binding protein lold (26 kDa, Protein from Escherichia coli (strain K12))
- Magnesium ion (24 Da, Ligand)
LolCDE in complex with lipoprotein and ADP
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 7arl
Q-score: 0.408
Tang X, Chang S, Zhang K, Luo Q, Zhang Z, Wang T, Qiao W, Wang C, Shen C, Zhang Z, Zhu X, Wei X, Dong C, Zhang X, Dong H
Nat Struct Mol Biol (2021) 28 pp. 347-355 [ Pubmed: 33782615 DOI: doi:10.1038/s41594-021-00573-x ]
- Lipoprotein-releasing complex (Complex from Escherichia coli K-12)
- (2s)-3-hydroxypropane-1,2-diyl dihexadecanoate (568 Da, Ligand)
- Palmitic acid (256 Da, Ligand)
- Lipoprotein-releasing system transmembrane protein lole (45 kDa, Protein from Escherichia coli (strain K12))
- Lpp (1 kDa, Protein from Escherichia coli K-12)
- Lolcde in complex with lipoprotein and adp (Complex)
- Lpp (Complex from Escherichia coli K-12)
- Lipoprotein-releasing abc transporter permease subunit lolc (43 kDa, Protein from Escherichia coli (strain K12))
- Lipoprotein-releasing system atp-binding protein lold (26 kDa, Protein from Escherichia coli (strain K12))
- Adenosine-5'-diphosphate (427 Da, Ligand)
- Magnesium ion (24 Da, Ligand)
LolCDE in complex with lipoprotein and LolA
Resolution: 3.6 Å
EM Method: Single-particle
Fitted PDBs: 7arm
Q-score: 0.339
Tang X, Chang S, Zhang K, Luo Q, Zhang Z, Wang T, Qiao W, Wang C, Shen C, Zhang Z, Zhu X, Wei X, Dong C, Zhang X, Dong H
Nat Struct Mol Biol (2021) 28 pp. 347-355 [ Pubmed: 33782615 DOI: doi:10.1038/s41594-021-00573-x ]
- Lpp (Complex from Escherichia coli BL21(DE3))
- (2s)-3-hydroxypropane-1,2-diyl dihexadecanoate (568 Da, Ligand)
- Lpp (1 kDa, Protein from Escherichia coli BL21(DE3))
- Lipoprotein-releasing system transmembrane protein lole (45 kDa, Protein from Escherichia coli (strain K12))
- Palmitic acid (256 Da, Ligand)
- Outer-membrane lipoprotein carrier protein (20 kDa, Protein from Escherichia coli (strain K12))
- Lipoprotein-releasing system (Complex from Escherichia coli (strain K12))
- Lipoprotein-releasing abc transporter permease subunit lolc (43 kDa, Protein from Escherichia coli (strain K12))
- Lipoprotein-releasing system atp-binding protein lold (26 kDa, Protein from Escherichia coli (strain K12))
- Lolcde in complex with lipoprotein and lola (Complex)