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HBV pgRNA T=4 NCP icosahedral symmetry
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 7abl
Q-score: 0.57
Patel N, Clark S, Weiss EU, Mata CP, Bohon J, Farquhar ER, Maskell DP, Ranson NA, Twarock R, Stockley PG
Commun Biol (2021) 4 pp. 1407-1407 [ Pubmed: 34916604 DOI: doi:10.1038/s42003-021-02897-2 ]
- Hepatitis b virus (Virus from Hepatitis B virus)
- Capsid protein (21 kDa, Protein from Hepatitis B virus)
HBV pgRNA T=4 NCP non-icosahedral symmetry
Patel N, Clark S, Weiss EU, Mata CP, Bohon J, Farquhar ER, Maskell DP, Ranson NA, Twarock R, Stockley PG
Commun Biol (2021) 4 pp. 1407-1407 [ Pubmed: 34916604 DOI: doi:10.1038/s42003-021-02897-2 ]
HBV pgRNA T=4 NCP symmetry expansion + genome focused classification
Patel N, Clark S, Weiss EU, Mata CP, Bohon J, Farquhar ER, Maskell DP, Ranson NA, Twarock R, Stockley PG
Commun Biol (2021) 4 pp. 1407-1407 [ Pubmed: 34916604 DOI: doi:10.1038/s42003-021-02897-2 ]
Aquifex aeolicus lumazine synthase-derived nucleocapsid variant NC-1 (120-mer)
Resolution: 3.5 Å
EM Method: Single-particle
Fitted PDBs: 7a4f
Q-score: 0.446
Tetter S, Terasaka N, Steinauer A, Bingham RJ, Clark S, Scott AJP, Patel N, Leibundgut M, Wroblewski E, Ban N, Stockley PG, Twarock R, Hilvert D
Science (2021) 372 pp. 1220-1224 [ DOI: doi:10.1126/science.abg2822 Pubmed: 34112695 ]
Aquifex aeolicus lumazine synthase-derived nucleocapsid variant NC-1 (180-mer)
Resolution: 4.2 Å
EM Method: Single-particle
Fitted PDBs: 7a4g
Q-score: 0.354
Tetter S, Terasaka N, Steinauer A, Bingham RJ, Clark S, Scott AJP, Patel N, Leibundgut M, Wroblewski E, Ban N, Stockley PG, Twarock R, Hilvert D
Science (2021) 372 pp. 1220-1224 [ DOI: doi:10.1126/science.abg2822 Pubmed: 34112695 ]
Aquifex aeolicus lumazine synthase-derived nucleocapsid variant NC-2 (180-mer)
Resolution: 4.5 Å
EM Method: Single-particle
Fitted PDBs: 7a4h
Q-score: 0.29
Tetter S, Terasaka N, Steinauer A, Bingham RJ, Clark S, Scott AJP, Patel N, Leibundgut M, Wroblewski E, Ban N, Stockley PG, Twarock R, Hilvert D
Science (2021) 372 pp. 1220-1224 [ DOI: doi:10.1126/science.abg2822 Pubmed: 34112695 ]
Aquifex aeolicus lumazine synthase-derived nucleocapsid variant NC-3
Resolution: 7.04 Å
EM Method: Single-particle
Fitted PDBs: 7a4i
Q-score: 0.163
Tetter S, Terasaka N, Steinauer A, Bingham RJ, Clark S, Scott AJP, Patel N, Leibundgut M, Wroblewski E, Ban N, Stockley PG, Twarock R, Hilvert D
Science (2021) 372 pp. 1220-1224 [ DOI: doi:10.1126/science.abg2822 Pubmed: 34112695 ]
Aquifex aeolicus lumazine synthase-derived nucleocapsid variant NC-4
Resolution: 3.04 Å
EM Method: Single-particle
Fitted PDBs: 7a4j
Q-score: 0.518
Tetter S, Terasaka N, Steinauer A, Bingham RJ, Clark S, Scott AJP, Patel N, Leibundgut M, Wroblewski E, Ban N, Stockley PG, Twarock R, Hilvert D
Science (2021) 372 pp. 1220-1224 [ DOI: doi:10.1126/science.abg2822 Pubmed: 34112695 ]
Chandler-Bostock R, Mata CP, Bingham RJ, Dykeman EC, Meng B, Tuthill TJ, Rowlands DJ, Ranson NA, Twarock R, Stockley PG
PLoS Pathog (2020) 16 [ DOI: 10.1371/journal.ppat.1009146 Pubmed: 33370422 ]
Image sets:
Resolution: 2.23 Å
EM Method: Single-particle
Fitted PDBs: 6thd
Q-score: 0.738
Chandler-Bostock R, Mata CP, Bingham RJ, Dykeman EC, Meng B, Tuthill TJ, Rowlands DJ, Ranson NA, Twarock R, Stockley PG
PLoS Pathog (2020) 16 pp. e1009146-e1009146 [ DOI: doi:10.1371/journal.ppat.1009146 Pubmed: 33370422 ]
- Genome polyprotein (27 kDa, Protein from Bovine enterovirus (strain VG-5-27))
- Myristic acid (228 Da, Ligand)
- Genome polyprotein (26 kDa, Protein from Bovine enterovirus (strain VG-5-27))
- Water (18 Da, Ligand)
- Bovine enterovirus (strain vg-5-27) (Virus from Bovine enterovirus (strain VG-5-27))
- Genome polyprotein (31 kDa, Protein from Bovine enterovirus (strain VG-5-27))
- Genome polyprotein (5 kDa, Protein from Bovine enterovirus (strain VG-5-27))
- Sulfate ion (96 Da, Ligand)