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Thermostabilized human prestin in complex with chloride, sulfate or salicylate
Futamata H, Fukuda M, Umeda R, Yamashita K, Tomita A, Takahashi S, Shikakura T, Hayashi S, Kusakizako T, Nishizawa T, Homma K, Nureki O
Nat Commun (2022) 13 [ Pubmed: 36266333 DOI: 10.1038/s41467-022-34017-x ]
Image sets:
Human amino acid transporter EAAT2
Kato T, Kusakizako T, Jin C, Zhou X, Ohgaki R, Quan L, Xu M, Okuda S, Kobayashi K, Yamashita K, Nishizawa T, Kanai Y, Nureki O
Nat Commun (2022) 13 [ Pubmed: 35953475 DOI: 10.1038/s41467-022-32442-6 ]
Image sets:
Thermostabilized human prestin in complex with chloride
Resolution: 3.52 Å
EM Method: Single-particle
Fitted PDBs: 7v73
Q-score: 0.488
Futamata H, Fukuda M, Umeda R, Yamashita K, Tomita A, Takahashi S, Shikakura T, Hayashi S, Kusakizako T, Nishizawa T, Homma K, Nureki O
Nat Commun (2022) 13 pp. 6208-6208 [ DOI: doi:10.1038/s41467-022-34017-x Pubmed: 36266333 ]
- Chloride ion (35 Da, Ligand)
- 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine (760 Da, Ligand)
- Cholesterol (386 Da, Ligand)
- Prestin (82 kDa, Protein from Homo sapiens)
- Prestin in complex with chloride ion (Complex from Homo sapiens)
Thermostabilized human prestin in complex with sulfate
Resolution: 3.63 Å
EM Method: Single-particle
Fitted PDBs: 7v74
Q-score: 0.5
Futamata H, Fukuda M, Umeda R, Yamashita K, Tomita A, Takahashi S, Shikakura T, Hayashi S, Kusakizako T, Nishizawa T, Homma K, Nureki O
Nat Commun (2022) 13 pp. 6208-6208 [ DOI: doi:10.1038/s41467-022-34017-x Pubmed: 36266333 ]
- Prestin (82 kDa, Protein from Homo sapiens)
- 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine (760 Da, Ligand)
- Sulfate ion (96 Da, Ligand)
- Cholesterol (386 Da, Ligand)
- Prestin in complex with chloride ion (Complex from Homo sapiens)
Thermostabilized human prestin in complex with salicylate
Resolution: 3.57 Å
EM Method: Single-particle
Fitted PDBs: 7v75
Q-score: 0.488
Futamata H, Fukuda M, Umeda R, Yamashita K, Tomita A, Takahashi S, Shikakura T, Hayashi S, Kusakizako T, Nishizawa T, Homma K, Nureki O
Nat Commun (2022) 13 pp. 6208-6208 [ DOI: doi:10.1038/s41467-022-34017-x Pubmed: 36266333 ]
- Prestin (82 kDa, Protein from Homo sapiens)
- 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine (760 Da, Ligand)
- Cholesterol (386 Da, Ligand)
- 2-hydroxybenzoic acid (138 Da, Ligand)
- Prestin in complex with chloride ion (Complex from Homo sapiens)
Thylakoid-located voltage-dependent chloride channel VCCN1
Hagino T, Kato T, Kasuya G, Kobayashi K, Kusakizako T, Hamamoto S, Sobajima T, Fujiwara Y, Yamashita K, Kawasaki H, Maturana AD, Nishizawa T, Nureki O
Nat Commun (2022) 13 [ DOI: 10.1038/s41467-022-30292-w Pubmed: 35523970 ]
Image sets:
Structure of the Dicer-2-R2D2 heterodimer bound to a small RNA duplex
Yamaguchi S, Naganuma M, Nishizawa T, Kusakizako T, Tomari Y, Nishimasu H, Nureki O
Nature (2022) 607 pp. 393-398 [ Pubmed: 35768503 DOI: 10.1038/s41586-022-04790-2 ]
Image sets:
Cryo-EM structure of the human ATP13A2
Tomita A, Daiho T, Kusakizako T, Yamashita K, Ogasawara S, Murata T, Nishizawa T, Nureki O
Mol Cell (2021) 81 pp. 4799-4809.e5 [ Pubmed: 34798056 DOI: 10.1016/j.molcel.2021.11.001 ]
Image sets:
- Unaligned movies for SPM-bound E2Pi state
- Unaligned movies for SPM-bound E2P state
- Unaligned movies for E1P-ADP state
- Unaligned movies for E1-ATP state
Cryo-EM structure of VCCN1 in detergent
Resolution: 3.0 Å
EM Method: Single-particle
Fitted PDBs: 7ek1
Q-score: 0.58
Hagino T, Kato T, Kasuya G, Kobayashi K, Kusakizako T, Hamamoto S, Sobajima T, Fujiwara Y, Yamashita K, Kawasaki H, Maturana AD, Nishizawa T, Nureki O
Nat Commun (2022) 13 pp. 2505-2505 [ Pubmed: 35523970 DOI: doi:10.1038/s41467-022-30292-w ]
- Bestrophin-like protein (42 kDa, Protein from Malus domestica)
- Bestrophin-like protein (Complex from Malus domestica)