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CryoEM structure of an inward-facing MelBSt at a Na(+)-bound and sugar low-affinity conformation
Resolution: 3.29 Å
EM Method: Single-particle
Fitted PDBs: 8t60
Q-score: 0.475
Hariharan P, Shi Y, Katsube S, Willibal K, Burrows ND, Mitchell P, Bakhtiiari A, Stanfield S, Pardon E, Kaback HR, Liang R, Steyaert J, Viner R, Guan L
eLife (2024) 12 [ DOI: doi:10.7554/eLife.92462 Pubmed: 38381130 ]
- Nb725_4 (14 kDa, Protein from synthetic construct)
- Nabfab_h chain (25 kDa, Protein from synthetic construct)
- Melibiose permease (54 kDa, Protein from Salmonella enterica subsp. enterica serovar Typhimurium)
- Nabfab_l chain (23 kDa, Protein from synthetic construct)
- Melbst bound with nb725_4-nabfab complex (120 kDa, Complex from Escherichia coli)
- Sodium ion (22 Da, Ligand)
Yeast Dmc1 presynaptic complex
Resolution: 3.21 Å
EM Method: Helical reconstruction
Fitted PDBs: 7ej6
Q-score: 0.524
Xu J, Zhao L, Peng S, Chu H, Liang R, Tian M, Connell PP, Li G, Chen C, Wang HW
Nucleic Acids Res (2021) 49 pp. 13135-13149 [ Pubmed: 34871438 DOI: doi:10.1093/nar/gkab1141 ]
- Yeast dmc1 presynaptic complex (Complex from Saccharomyces cerevisiae)
- Hlj1_g0016300.mrna.1.cds.1 (36 kDa, Protein from Saccharomyces cerevisiae)
- Dna (5'-d(p*tp*tp*tp*tp*tp*tp*tp*tp*t)-3') (2 kDa, DNA from Saccharomyces cerevisiae)
- Adenosine-5'-triphosphate (507 Da, Ligand)
- Magnesium ion (24 Da, Ligand)
Yeast Dmc1 post-synaptic complex
Resolution: 3.41 Å
EM Method: Helical reconstruction
Fitted PDBs: 7ej7
Q-score: 0.505
Xu J, Zhao L, Peng S, Chu H, Liang R, Tian M, Connell PP, Li G, Chen C, Wang HW
Nucleic Acids Res (2021) 49 pp. 13135-13149 [ Pubmed: 34871438 DOI: doi:10.1093/nar/gkab1141 ]
- Hlj1_g0016300.mrna.1.cds.1 (36 kDa, Protein from Saccharomyces cerevisiae)
- Dna (5'-d(p*ap*ap*ap*ap*ap*ap*ap*ap*a)-3') (2 kDa, DNA from Saccharomyces cerevisiae)
- Dna (5'-d(p*tp*tp*tp*tp*tp*tp*tp*tp*t)-3') (2 kDa, DNA from Saccharomyces cerevisiae)
- Adenosine-5'-triphosphate (507 Da, Ligand)
- Magnesium ion (24 Da, Ligand)
- Yeast dmc1 post-synaptic complex (Complex from Saccharomyces cerevisiae)
human RAD51 presynaptic complex
Resolution: 2.97 Å
EM Method: Helical reconstruction
Fitted PDBs: 7ejc
Q-score: 0.554
Xu J, Zhao L, Peng S, Chu H, Liang R, Tian M, Connell PP, Li G, Chen C, Wang HW
Nucleic Acids Res (2021) 49 pp. 13135-13149 [ Pubmed: 34871438 DOI: doi:10.1093/nar/gkab1141 ]
- Phosphoaminophosphonic acid-adenylate ester (506 Da, Ligand)
- Human rad51 (Complex from Homo sapiens)
- Dna (5'-d(p*tp*tp*tp*tp*tp*tp*tp*tp*t)-3') (2 kDa, DNA from Homo sapiens)
- Magnesium ion (24 Da, Ligand)
- Dna repair protein rad51 homolog 1 (37 kDa, Protein from Homo sapiens)
- Dna (Complex from Homo sapiens)
- Human rad51 presynaptic complex (Complex)
- 4-bromanyl-n-(4-bromophenyl)-3-[(phenylmethyl)sulfamoyl]benzamide (524 Da, Ligand)
hRAD51 mutation 273-DG-274 postsynaptic complex with dsDNA after strand exchange process.
human RAD51 post-synaptic complex
Resolution: 3.98 Å
EM Method: Helical reconstruction
Fitted PDBs: 7eje
Q-score: 0.382
Xu J, Zhao L, Peng S, Chu H, Liang R, Tian M, Connell PP, Li G, Chen C, Wang HW
Nucleic Acids Res (2021) 49 pp. 13135-13149 [ Pubmed: 34871438 DOI: doi:10.1093/nar/gkab1141 ]
- Dna (5'-d(p*ap*ap*ap*ap*ap*ap*ap*ap*a)-3') (2 kDa, DNA from Homo sapiens)
- Human rad51 (Complex)
- Phosphoaminophosphonic acid-adenylate ester (506 Da, Ligand)
- Human rad51 post-synaptic complex (Complex from Homo sapiens)
- Dna (5'-d(p*tp*tp*tp*tp*tp*tp*tp*tp*t)-3') (2 kDa, DNA from Homo sapiens)
- Magnesium ion (24 Da, Ligand)
- Dna repair protein rad51 homolog 1 (37 kDa, Protein from Homo sapiens)
- Dna (Complex)
Cryo-EM Structure of Isomeric Molluscan Hemocyanin Type 1 triggered by viral infection