cryo-EM structure of archaeal Ribonuclease P with mature tRNA
Resolution: 4.3 Å
EM Method: Single-particle
Fitted PDBs: 6k0b
Q-score: 0.221
Wan F, Wang Q, Tan J, Tan M, Chen J, Shi S, Lan P, Wu J, Lei M
Nat Commun (2019) 10 pp. 2617-2617 [ Pubmed: 31197137 DOI: doi:10.1038/s41467-019-10496-3 ]
- Cryo-em structure of archaeal ribonuclease p with mature trna (Complex from Methanocaldococcus jannaschii)
- Trna (26 kDa, RNA from Escherichia coli)
- Rpr (83 kDa, RNA from Methanocaldococcus jannaschii)
- Ribonuclease p protein component 4 (15 kDa, Protein from Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440))
- Ribonuclease p protein component 2 (15 kDa, Protein from Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440))
- Ribonuclease p protein component 3 (27 kDa, Protein from Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440))
- 50s ribosomal protein l7ae (12 kDa, Protein from Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440))
- Zinc ion (65 Da, Ligand)
- Ribonuclease p protein component 1 (10 kDa, Protein from Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440))
Cryo-EM structure of human Ribonuclease P
Resolution: 3.92 Å
EM Method: Single-particle
Fitted PDBs: 6ahr
Q-score: 0.224
Wu J, Niu S, Tan M, Huang C, Li M, Song Y, Wang Q, Chen J, Shi S, Lan P, Lei M
Cell (2018) 175 pp. 1393-1404.e11 [ Pubmed: 30454648 DOI: doi:10.1016/j.cell.2018.10.003 ]
- Ribonuclease p protein subunit p40 (41 kDa, Protein from Homo sapiens)
- Ribonuclease p/mrp protein subunit pop5 (18 kDa, Protein from Homo sapiens)
- Ribonuclease p protein subunit p29 (25 kDa, Protein from Homo sapiens)
- Ribonucleases p/mrp protein subunit pop1 (114 kDa, Protein from Homo sapiens)
- Rnase p (Complex from Homo sapiens)
- Ribonuclease p protein subunit p21 (17 kDa, Protein from Homo sapiens)
- Ribonuclease p protein subunit p38 (31 kDa, Protein from Homo sapiens)
- Ribonuclease p protein subunit p25 (20 kDa, Protein from Homo sapiens)
- Ribonuclease p protein subunit p30 (29 kDa, Protein from Homo sapiens)
- H1 rna (110 kDa, RNA from Homo sapiens)
- Zinc ion (65 Da, Ligand)
- Ribonuclease p protein subunit p14 (13 kDa, Protein from Homo sapiens)
- Ribonuclease p protein subunit p20 (15 kDa, Protein from Homo sapiens)
Cryo-EM structure of human Ribonuclease P with mature tRNA
Resolution: 3.66 Å
EM Method: Single-particle
Fitted PDBs: 6ahu
Q-score: 0.288
Wu J, Niu S, Tan M, Huang C, Li M, Song Y, Wang Q, Chen J, Shi S, Lan P, Lei M
Cell (2018) 175 pp. 1393-1404.e11 [ Pubmed: 30454648 DOI: doi:10.1016/j.cell.2018.10.003 ]
- Ribonuclease p protein subunit p40 (41 kDa, Protein from Homo sapiens)
- Ribonuclease p/mrp protein subunit pop5 (18 kDa, Protein from Homo sapiens)
- Ribonuclease p protein subunit p29 (25 kDa, Protein from Homo sapiens)
- Ribonucleases p/mrp protein subunit pop1 (114 kDa, Protein from Homo sapiens)
- Rnase p (Complex from Homo sapiens)
- Ribonuclease p protein subunit p21 (17 kDa, Protein from Homo sapiens)
- Trna (23 kDa, RNA from Homo sapiens)
- Ribonuclease p protein subunit p38 (31 kDa, Protein from Homo sapiens)
- Rnase p with trna (Complex)
- Ribonuclease p protein subunit p25 (20 kDa, Protein from Homo sapiens)
- Ribonuclease p protein subunit p30 (29 kDa, Protein from Homo sapiens)
- H1 rna (110 kDa, RNA from Homo sapiens)
- Zinc ion (65 Da, Ligand)
- Rna (Complex from Homo sapiens)
- Ribonuclease p protein subunit p14 (13 kDa, Protein from Homo sapiens)
- Ribonuclease p protein subunit p20 (15 kDa, Protein from Homo sapiens)
Cryo-EM structure of yeast Ribonuclease P
Resolution: 3.48 Å
EM Method: Single-particle
Fitted PDBs: 6agb
Q-score: 0.311
Lan P, Tan M, Zhang Y, Niu S, Chen J, Shi S, Qiu S, Wang X, Peng X, Cai G, Cheng H, Wu J, Li G, Lei M
Science (2018) 362 [ DOI: doi:10.1126/science.aat6678 Pubmed: 30262633 ]
- Ribonuclease p protein subunit rpr2 (16 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Rnase p (Complex from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Ribonucleases p/mrp protein subunit pop3 (22 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Zinc ion (65 Da, Ligand)
- Ribonuclease p/mrp protein subunit pop5 (19 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Ribonucleases p/mrp protein subunit pop8 (15 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Rnases mrp/p 32.9 kda subunit (32 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Ribonuclease p rna (118 kDa, RNA from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Ribonucleases p/mrp protein subunit pop1 (100 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Ribonucleases p/mrp protein subunit pop7 (15 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Ribonucleases p/mrp protein subunit pop6 (18 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Ribonuclease p/mrp protein subunit rpp1 (32 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Cryo-EM structure of yeast Ribonuclease P with pre-tRNA substrate
Resolution: 3.48 Å
EM Method: Single-particle
Fitted PDBs: 6ah3
Q-score: 0.259
Lan P, Tan M, Zhang Y, Niu S, Chen J, Shi S, Qiu S, Wang X, Peng X, Cai G, Cheng H, Wu J, Li G, Lei M
Science (2018) 362 [ DOI: doi:10.1126/science.aat6678 Pubmed: 30262633 ]
- Ribonuclease p protein subunit rpr2 (16 kDa, Protein from Baker's yeast)
- Rnase p (Complex from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Ribonucleases p/mrp protein subunit pop3 (22 kDa, Protein from Baker's yeast)
- Pre-trna (25 kDa, RNA from Saccharomyces cerevisiae S288c)
- Rnases mrp/p 32.9 kda subunit (32 kDa, Protein from Baker's yeast)
- Ribonucleases p/mrp protein subunit pop1 (100 kDa, Protein from Baker's yeast)
- Ribonucleases p/mrp protein subunit pop6 (18 kDa, Protein from Baker's yeast)
- Ribonuclease p rna (118 kDa, RNA from Baker's yeast)
- Rnase p with pre-trna substrate (Complex)
- Ribonuclease p/mrp protein subunit rpp1 (32 kDa, Protein from Baker's yeast)
- Ribonuclease p/mrp protein subunit pop5 (19 kDa, Protein from Baker's yeast)
- Ribonucleases p/mrp protein subunit pop7 (15 kDa, Protein from Baker's yeast)
- Pre-trna (Complex from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Ribonucleases p/mrp protein subunit pop8 (15 kDa, Protein from Baker's yeast)
- Magnesium ion (24 Da, Ligand)
- Zinc ion (65 Da, Ligand)