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Unique vertex of the phicrAss001 virion
Resolution: 3.62 Å
EM Method: Single-particle
Fitted PDBs: 7qoi
Q-score: 0.505
Bayfield OW, Shkoporov AN, Yutin N, Khokhlova EV, Smith JLR, Hawkins DEDP, Koonin EV, Hill C, Antson AA
Nature (2023) 617 pp. 409-416 [ DOI: doi:10.1038/s41586-023-06019-2 Pubmed: 37138077 ]
- Portal protein gp20 (93 kDa, Protein from Bacteroides phage crAss001)
- Portal vertex capsid protein gp57 (11 kDa, Protein from Bacteroides phage crAss001)
- Auxiliary capsid protein gp36 (36 kDa, Protein from Bacteroides phage crAss001)
- Major capsid protein gp32 (57 kDa, Protein from Bacteroides phage crAss001)
- Magnesium ion (24 Da, Ligand)
- Ring protein 1 gp43 (27 kDa, Protein from Bacteroides phage crAss001)
- Cargo protein 1 gp45 (90 kDa, Protein from Bacteroides phage crAss001)
- Head fiber trimer protein gp21 (10 kDa, Protein from Bacteroides phage crAss001)
- Ring protein 2 gp40 (26 kDa, Protein from Bacteroides phage crAss001)
- Bacteroides phage crass001 (Virus from Bacteroides phage crAss001)
Tail barrel assembly of the phicrAss001 virion with C12 symmetry imposed
Resolution: 3.21 Å
EM Method: Single-particle
Fitted PDBs: 7qoj
Q-score: 0.562
Bayfield OW, Shkoporov AN, Yutin N, Khokhlova EV, Smith JLR, Hawkins DEDP, Koonin EV, Hill C, Antson AA
Nature (2023) 617 pp. 409-416 [ DOI: doi:10.1038/s41586-023-06019-2 Pubmed: 37138077 ]
- Portal protein gp20 (93 kDa, Protein from Bacteroides phage crAss001)
- Tail hub protein a gp38 (24 kDa, Protein from Bacteroides phage crAss001)
- Magnesium ion (24 Da, Ligand)
- Tail fiber protein gp22 (92 kDa, Protein from Bacteroides phage crAss001)
- Ring protein 1 gp43 (27 kDa, Protein from Bacteroides phage crAss001)
- Ring protein 3 gp35 (26 kDa, Protein from Bacteroides phage crAss001)
- Cargo protein 1 gp45 (90 kDa, Protein from Bacteroides phage crAss001)
- Tail hub protein b gp39 (13 kDa, Protein from Bacteroides phage crAss001)
- Water (18 Da, Ligand)
- Ring protein 4/5 gp34 (26 kDa, Protein from Bacteroides phage crAss001)
- Ring protein 2 gp40 (26 kDa, Protein from Bacteroides phage crAss001)
- Bacteroides phage crass001 (Virus from Bacteroides phage crAss001)
Tail assembly of the phicrAss001 virion with C6 symmetry imposed
Resolution: 3.33 Å
EM Method: Single-particle
Fitted PDBs: 7qol
Q-score: 0.525
Bayfield OW, Shkoporov AN, Yutin N, Khokhlova EV, Smith JLR, Hawkins DEDP, Koonin EV, Hill C, Antson AA
Nature (2023) 617 pp. 409-416 [ DOI: doi:10.1038/s41586-023-06019-2 Pubmed: 37138077 ]
- Portal protein gp20 (93 kDa, Protein from Bacteroides phage crAss001)
- Muzzle bound helix (1 kDa, Protein from Bacteroides phage crAss001)
- Muzzle protein gp44 (156 kDa, Protein from Bacteroides phage crAss001)
- Tail hub protein a gp38 (24 kDa, Protein from Bacteroides phage crAss001)
- Magnesium ion (24 Da, Ligand)
- Tail fiber protein gp22 (92 kDa, Protein from Bacteroides phage crAss001)
- Ring protein 1 gp43 (27 kDa, Protein from Bacteroides phage crAss001)
- Ring protein 3 gp35 (26 kDa, Protein from Bacteroides phage crAss001)
- Cargo protein 1 gp45 (90 kDa, Protein from Bacteroides phage crAss001)
- Tail hub protein b gp39 (13 kDa, Protein from Bacteroides phage crAss001)
- Water (18 Da, Ligand)
- Ring protein 4/5 gp34 (26 kDa, Protein from Bacteroides phage crAss001)
- Ring protein 2 gp40 (26 kDa, Protein from Bacteroides phage crAss001)
- Bacteroides phage crass001 (Virus from Bacteroides phage crAss001)