Cryo-EM structure of the RecA postsynaptic filament from S. pneumoniae
Resolution: 3.8 Å
EM Method: Helical reconstruction
Fitted PDBs: 8amf
Q-score: 0.409
Hertzog M, Perry TN, Dupaigne P, Serres S, Morales V, Soulet AL, Bell JC, Margeat E, Kowalczykowski SC, Le Cam E, Fronzes R, Polard P
Nucleic Acids Res (2023) 51 pp. 2800-2817 [ Pubmed: 36806960 DOI: doi:10.1093/nar/gkad080 ]
- Phosphothiophosphoric acid-adenylate ester (523 Da, Ligand)
- Dna (2 kDa, DNA from Lambdavirus lambda)
- Reca postsynaptic complex from s. pneumoniae (Complex from Streptococcus pneumoniae)
- Protein reca (42 kDa, Protein from Streptococcus pneumoniae)
- Dna (3 kDa, DNA from Lambdavirus lambda)
Structure of bacteriophage lambda tube protein V in C3
Resolution: 2.7 Å
EM Method: Single-particle
Fitted PDBs: 7t4f
Q-score: 0.547
Prokhorov NS, Yang Q, Catalano CE, Morais MC
To Be Published
- Escherichia virus lambda (Virus from Escherichia virus Lambda)
- Tail tube protein (25 kDa, Protein from Escherichia virus Lambda)
Structure of bacteriophage lambda tube protein V in C6
Resolution: 2.7 Å
EM Method: Single-particle
Fitted PDBs: 7t2e
Q-score: 0.631
Prokhorov NS, Yang Q, Catalano CE, Morais MC
To Be Published
- Tail tube protein (16 kDa, Protein from Escherichia virus Lambda)
- Escherichia virus lambda (Virus from Escherichia virus Lambda)
Procapsid of bacteriophage lambda
Davis CR, Churchill ME, Backos D, Maruthi K, Prokhorov NS, Morais MC, Catalano CE
To Be Published
Bacteriophage Lambda Red-Beta N-terminal domain helical assembly in complex with dsDNA
Resolution: 3.3 Å
EM Method: Helical reconstruction
Fitted PDBs: 7ujl
Q-score: 0.543
Newing TP, Brewster JL, Fitschen LJ, Bouwer JC, Johnston NP, Yu H, Tolun G
Nat Commun (2022) 13 pp. 5649- [ Pubmed: 36163171 DOI: doi:10.1038/s41467-022-33090-6 ]
- Complementary ssdna (Complex from Escherichia coli)
- Template ssdna (Complex from Escherichia coli)
- Complementary dna (8 kDa, DNA from Escherichia coli)
- Red-beta annealase n-terminal domain (Complex from Escherichia virus Lambda)
- Template dna (8 kDa, DNA from Escherichia coli)
- Recombination protein bet (21 kDa, Protein from Escherichia virus Lambda)
- Redbeta177 oligomeric helical assembly bound to two complementary 27mer ssdna oligonucleotides (102 MDa, Complex)
Cryo-EM structure of bacteriophage lambda procapsid at 5.03 Angstrom
Resolution: 5.03 Å
EM Method: Single-particle
Fitted PDBs: 7vi9
Q-score: 0.268
Structure (2022) 30 pp. 637- [ DOI: doi:10.1016/j.str.2021.12.009 Pubmed: 35026161 ]
- Major capsid protein (38 kDa, Protein from Escherichia phage lambda)
- Escherichia virus lambda (Virus from Escherichia virus Lambda)
Focused refinement of asymmetric unit of bacteriophage lambda procapsid at 3.88 Angstrom
Resolution: 3.88 Å
EM Method: Single-particle
Fitted PDBs: 7via
Q-score: 0.444
Structure (2022) 30 pp. 637- [ DOI: doi:10.1016/j.str.2021.12.009 Pubmed: 35026161 ]
- Major capsid protein (38 kDa, Protein from Escherichia phage lambda)
- Escherichia virus lambda (Virus from Escherichia virus Lambda)
cryoEM structure of bacteriophage lambda capsid at 5.6 Angstrom
Resolution: 5.6 Å
EM Method: Single-particle
Fitted PDBs: 7vii
Q-score: 0.209
Structure (2022) 30 pp. 637- [ DOI: doi:10.1016/j.str.2021.12.009 Pubmed: 35026161 ]
- Major capsid protein (38 kDa, Protein from Escherichia phage lambda)
- Escherichia virus lambda (Virus from Escherichia virus Lambda)
- Capsid decoration protein (11 kDa, Protein from Escherichia phage lambda)
Asymmetric unit of cryoEM structure of bacteriophage lambda capsid at 3.76 Angstrom
Resolution: 3.76 Å
EM Method: Single-particle
Fitted PDBs: 7vik
Q-score: 0.447
Structure (2022) 30 pp. 637- [ DOI: doi:10.1016/j.str.2021.12.009 Pubmed: 35026161 ]
- Major capsid protein (38 kDa, Protein from Escherichia phage lambda)
- Escherichia virus lambda (Virus from Escherichia virus Lambda)
- Capsid decoration protein (11 kDa, Protein from Escherichia phage lambda)
Cryo-EM structure of Escherichia coli RNA polymerase bound to lambda PR promoter DNA (class 1)
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 7mkd
Q-score: 0.495
Saecker RM, Chen J, Chiu CE, Malone B, Sotiris J, Ebrahim M, Yen LY, Eng ET, Darst SA
PNAS (2021) 118 [ DOI: doi:10.1073/pnas.2112877118 Pubmed: 34599106 ]
- Dna-directed rna polymerase subunit beta (150 kDa, Protein from Escherichia coli)
- Rna polymerase (Complex from Escherichia coli)
- Template strand of lambda pr promoter dna (27 kDa, DNA from Escherichia virus Lambda)
- Dna-directed rna polymerase subunit alpha (36 kDa, Protein from Escherichia coli)
- Rna polymerase sigma factor rpod (70 kDa, Protein from Escherichia coli)
- Lambda pr promoter dna (Complex from Escherichia virus Lambda)
- Chapso (631 Da, Ligand)
- Dna-directed rna polymerase subunit beta' (155 kDa, Protein from Escherichia coli)
- Magnesium ion (24 Da, Ligand)
- Escherichia coli sigma 70 rna polymerase bound to lambda pr promoter dna (Complex)
- Nontemplate strand of lambda pr promoter dna (27 kDa, DNA from Escherichia virus Lambda)
- Dna-directed rna polymerase subunit omega (10 kDa, Protein from Escherichia coli)
- Zinc ion (65 Da, Ligand)