Tail structure of bacteriophage SSV19
Resolution: 3.8 Å
EM Method: Single-particle
Fitted PDBs: 7xdi
Q-score: 0.449
Han Z, Yuan W, Xiao H, Wang L, Zhang J, Peng Y, Cheng L, Liu H, Huang L
PNAS (2022) 119 pp. e2119439119-e2119439119 [ DOI: doi:10.1073/pnas.2119439119 Pubmed: 35895681 ]
- Sulfolobus spindle-shaped virus (Virus from Sulfolobus spindle-shaped virus)
- B210 (23 kDa, Protein from Sulfolobus spindle-shaped virus)
- Vp4 (137 kDa, Protein from Sulfolobus spindle-shaped virus)
- C131 (14 kDa, Protein from Sulfolobus spindle-shaped virus)
- Vp1 (9 kDa, Protein from Sulfolobus spindle-shaped virus)
Resolution: 2.95 Å
EM Method: Single-particle
Fitted PDBs: 7wl3
Q-score: 0.566
Yang P, Shi D, Fu J, Zhang L, Chen R, Zheng B, Wang X, Xu S, Zhu L, Wang K
J Virol (2022) 96 pp. e0010522-e0010522 [ Pubmed: 35442060 DOI: doi:10.1128/jvi.00105-22 ]
- Genome polyprotein (27 kDa, Protein from Coxsackievirus B5)
- Coxsackievirus b5 (Virus from Coxsackievirus B5)
- Capsid protein (25 kDa, Protein from Coxsackievirus B5)
- Genome polyprotein (26 kDa, Protein from Coxsackievirus B5)
Resolution: 3.5 Å
EM Method: Single-particle
Fitted PDBs: 7ffe
Q-score: 0.425
Ma B, Huang C, Ma J, Xiang Y, Zhang X
Nature (2021) 598 pp. 677-681 [ DOI: doi:10.1038/s41586-021-03909-1 Pubmed: 34646021 ]
- Venezuelan equine encephalitis virus (strain tc-83) (Virus from Venezuelan equine encephalitis virus (strain TC-83))
- Capsid protein (30 kDa, Protein from Venezuelan equine encephalitis virus (strain TC-83))
- Spike glycoprotein e2 (47 kDa, Protein from Venezuelan equine encephalitis virus (strain TC-83))
- Assembly protein e3 (6 kDa, Protein from Venezuelan equine encephalitis virus (strain TC-83))
- Spike glycoprotein e1 (47 kDa, Protein from Venezuelan equine encephalitis virus (strain TC-83))
Cryo-EM structure of VEEV VLP at the 5-fold axes
Resolution: 3.5 Å
EM Method: Single-particle
Fitted PDBs: 7ffo
Q-score: 0.45
Ma B, Huang C, Ma J, Xiang Y, Zhang X
Nature (2021) 598 pp. 677-681 [ DOI: doi:10.1038/s41586-021-03909-1 Pubmed: 34646021 ]
- Venezuelan equine encephalitis virus (strain tc-83) (Virus from Venezuelan equine encephalitis virus (strain TC-83))
- Capsid protein (30 kDa, Protein from Venezuelan equine encephalitis virus (strain TC-83))
- Spike glycoprotein e2 (47 kDa, Protein from Venezuelan equine encephalitis virus (strain TC-83))
- Assembly protein e3 (6 kDa, Protein from Venezuelan equine encephalitis virus (strain TC-83))
- Spike glycoprotein e1 (47 kDa, Protein from Venezuelan equine encephalitis virus (strain TC-83))
Cryo-EM structure of VEEV VLP at the 2-fold axes
Resolution: 3.5 Å
EM Method: Single-particle
Fitted PDBs: 7ffq
Q-score: 0.382
Ma B, Huang C, Ma J, Xiang Y, Zhang X
Nature (2021) 598 pp. 677-681 [ DOI: doi:10.1038/s41586-021-03909-1 Pubmed: 34646021 ]
- Venezuelan equine encephalitis virus (strain tc-83) (Virus from Venezuelan equine encephalitis virus (strain TC-83))
- Capsid protein (30 kDa, Protein from Venezuelan equine encephalitis virus (strain TC-83))
- Spike glycoprotein e2 (47 kDa, Protein from Venezuelan equine encephalitis virus (strain TC-83))
- Assembly protein e3 (6 kDa, Protein from Venezuelan equine encephalitis virus (strain TC-83))
- Spike glycoprotein e1 (47 kDa, Protein from Venezuelan equine encephalitis virus (strain TC-83))
Resolution: 2.32 Å
EM Method: Single-particle
Fitted PDBs: 7rk9
Q-score: 0.664
Martino RA, Fluck 3rd EC, Murphy J, Wang Q, Hoff H, Pumroy RA, Lee CY, Sims JJ, Roy S, Moiseenkova-Bell VY, Wilson JM
J Virol (2021) 95 pp. e0116421-e0116421 [ DOI: doi:10.1128/JVI.01164-21 Pubmed: 34346767 ]
- Adeno-associated virus - 1 (Virus from Adeno-associated virus - 1)
- Capsid protein (82 kDa, Protein from Adeno-associated virus - 1)
Mutant strain M3 of foot-and-mouth disease virus type O
Resolution: 3.15 Å
EM Method: Single-particle
Fitted PDBs: 7eno
Q-score: 0.547
Dong H, Lu Y, Zhang Y, Mu S, Wang N, Du P, Zhi X, Wen X, Wang X, Sun S, Zhang Y, Guo H
J Virol (2021) 95 pp. e0017721-e0017721 [ Pubmed: 34011545 DOI: doi:10.1128/JVI.00177-21 ]
- Vp3 of o type fmdv capsid (23 kDa, Protein from Foot-and-mouth disease virus - type O)
- Vp2 of o type fmdv capsid (24 kDa, Protein from Foot-and-mouth disease virus - type O)
- Vp1 of o type fmdv capsid (23 kDa, Protein from Foot-and-mouth disease virus - type O)
- Foot-and-mouth disease virus - type o (Virus from Foot-and-mouth disease virus - type O)
- Vp4 of o type fmdv capsid (8 kDa, Protein from Foot-and-mouth disease virus - type O)
Structure of the mature RSV CA lattice: T=1 CA icosahedron
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 7no0
Q-score: 0.517
Obr M, Ricana CL, Nikulin N, Feathers JR, Klanschnig M, Thader A, Johnson MC, Vogt VM, Schur FKM, Dick RA
Nat Commun (2021) 12 pp. 3226-3226 [ Pubmed: 34050170 DOI: doi:10.1038/s41467-021-23506-0 ]
Structure of the mature RSV CA lattice: T=3 CA icosahedron
Resolution: 7.6 Å
EM Method: Single-particle
Fitted PDBs: 7no1
Q-score: 0.232
Obr M, Ricana CL, Nikulin N, Feathers JR, Klanschnig M, Thader A, Johnson MC, Vogt VM, Schur FKM, Dick RA
Nat Commun (2021) 12 pp. 3226-3226 [ Pubmed: 34050170 DOI: doi:10.1038/s41467-021-23506-0 ]
Resolution: 3.4 Å
EM Method: Single-particle
Fitted PDBs: 6q0b
Q-score: 0.333
Shah PNM, Filman DJ, Karunatilaka KS, Hesketh EL, Groppelli E, Strauss M, Hogle JM
PLoS Pathog (2020) 16 pp. e1008920-e1008920 [ DOI: doi:10.1371/journal.ppat.1008920 Pubmed: 32997730 ]
- Capsid protein vp3 (26 kDa, Protein from Poliovirus type 1 (strain Mahoney))
- Poliovirus type 1 (strain mahoney) (10 MDa, Virus from Poliovirus type 1 (strain Mahoney))
- Capsid protein vp1 (33 kDa, Protein from Poliovirus type 1 (strain Mahoney))
- Anti-vp1 mab (44 kDa, Protein from mouse)
- Capsid protein vp4 (7 kDa, Protein from Poliovirus type 1 (strain Mahoney))
- Capsid protein vp2 (30 kDa, Protein from Poliovirus type 1 (strain Mahoney))