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Structure of divisome complex FtsWIQLB
Yang L, Chen Y, Chang S, Shen C, Wang X, Zhang C, Zhang Z, Ding BS, Su Z, Dong H, Tang X
Cell Discov (2024) 10 pp. 2-2 [ DOI: doi:10.1038/s41421-023-00629-w Pubmed: 38172099 ]
- Cell division protein ftsq (32 kDa, Protein from Escherichia coli K-12)
- Probable peptidoglycan glycosyltransferase ftsw (43 kDa, Protein from Escherichia coli K-12)
- Peptidoglycan d,d-transpeptidase ftsi (62 kDa, Protein from Escherichia coli K-12)
- Divisome complex ftswiqlb (Complex from Escherichia coli K-12)
- Cell division protein ftsl (11 kDa, Protein from Escherichia coli K-12)
- Cell division protein ftsb (10 kDa, Protein from Escherichia coli K-12)
Resolution: 3.18 Å
EM Method: Single-particle
Fitted PDBs: 8k0c
Q-score: 0.397
Fan P, Sun M, Zhang X, Zhang H, Liu Y, Yao Y, Li M, Fang T, Sun B, Chen Z, Chi X, Chen L, Peng C, Chen Z, Zhang G, Ren Y, Liu Z, Li Y, Li J, Li E, Guan W, Li S, Gong R, Zhang K, Yu C, Chiu S
Nat Commun (2024) 15 pp. 4330-4330 [ Pubmed: 38773072 DOI: doi:10.1038/s41467-024-48601-w ]
- Heavy chain of 1e5 fab fragments (26 kDa, Protein from Macaca mulatta)
- Light chain of 1e5 fab fragments (23 kDa, Protein from Macaca mulatta)
- Glycoprotein g (56 kDa, Protein from Nipah virus)
- Glycoprotein g (6 kDa, Protein from Nipah virus)
- Cryo-em structure of conformation 1 of complex of nipah virus attachment glycoprotein g with 1e5 neutralizing antibody (Complex from Nipah virus)
Resolution: 2.94 Å
EM Method: Single-particle
Fitted PDBs: 8k0d
Q-score: 0.461
Fan P, Sun M, Zhang X, Zhang H, Liu Y, Yao Y, Li M, Fang T, Sun B, Chen Z, Chi X, Chen L, Peng C, Chen Z, Zhang G, Ren Y, Liu Z, Li Y, Li J, Li E, Guan W, Li S, Gong R, Zhang K, Yu C, Chiu S
Nat Commun (2024) 15 pp. 4330-4330 [ Pubmed: 38773072 DOI: doi:10.1038/s41467-024-48601-w ]
- Cryo-em structure of conformation 2 of complex of nipah virus attachment g with 1e5 neutralizing antibody (Complex from Nipah virus)
- The light chain of 1e5 (23 kDa, Protein from Macaca mulatta)
- The heavy chain of 1e5 (26 kDa, Protein from Macaca mulatta)
- Glycoprotein g (45 kDa, Protein from Nipah virus)
Nipah virus Attachment glycoprotein with 41-6 antibody fragment
Resolution: 2.88 Å
EM Method: Single-particle
Fitted PDBs: 8k3c
Q-score: 0.44
Chen L, Sun M, Zhang H, Zhang X, Yao Y, Li M, Li K, Fan P, Zhang H, Qin Y, Zhang Z, Li E, Chen Z, Guan W, Li S, Yu C, Zhang K, Gong R, Chiu S
Nat Commun (2024) 15 pp. 2987-2987 [ DOI: doi:10.1038/s41467-024-47213-8 Pubmed: 38582870 ]
- Cryo-em structure of complex of attachment glycoprotein g with 41-6 fab fragment (Complex from Henipavirus nipahense)
- Glycoprotein g (52 kDa, Protein from Henipavirus nipahense)
- Light chain of 41-6 fab fragment (22 kDa, Protein from Homo sapiens)
- Heavy chain of 41-6 fab fragments (25 kDa, Protein from Homo sapiens)
Cryo-EM structure of Cas12j-SF05-crRNA-dsDNA complex
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 8inb
Q-score: 0.489
Duan Z, Zhang X, Zhang JT, Li S, Liu R, Sun J, Zhao Q, Jia N, Jia N, Zhu JK
Cell Discov (2023) 9 pp. 117-117 [ DOI: doi:10.1038/s41421-023-00612-5 Pubmed: 37990011 ]
- Crrna (18 kDa, RNA from Biggievirus Mos11)
- Ternary complex of cas12j-sf05 with crrna and target dsdna (Complex from Biggievirus Mos11)
- Nts-dna (16 kDa, DNA from Biggievirus Mos11)
- Ts-dna (16 kDa, DNA from Biggievirus Mos11)
- Cas12j-sf05 (83 kDa, Protein from Biggievirus Mos11)
Cryo-EM structure of PAO1-ImcA with GMPCPP
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 8wcn
Q-score: 0.362
Zhan X, Zhang K, Wang C, Fan Q, Tang X, Zhang X, Wang K, Fu Y, Liang H
Nat Commun (2024) 15 pp. 1860-1860 [ DOI: doi:10.1038/s41467-024-46149-3 Pubmed: 38424057 ]
- Ggdef domain-containing protein (Complex from Pseudomonas aeruginosa)
- Magnesium ion (24 Da, Ligand)
- Diguanylate cyclase (51 kDa, Protein from Pseudomonas aeruginosa)
- Phosphomethylphosphonic acid guanylate ester (521 Da, Ligand)
GPR3 Orphan G-coupled Protein Receptor in complex with Dominant Negative Gs.
Resolution: 3.49 Å
EM Method: Single-particle
Fitted PDBs: 8u8f
Q-score: 0.422
Russell IC, Zhang X, Bumbak F, McNeill SM, Josephs TM, Leeming MG, Christopoulos G, Venugopal H, Flocco MM, Sexton PM, Wootten D, Belousoff MJ
Biochemistry (2024) 63 pp. 625-631 [ Pubmed: 38376112 DOI: doi:10.1021/acs.biochem.3c00647 ]
- Guanine nucleotide-binding protein g(i)/g(s)/g(o) subunit gamma-2 (6 kDa, Protein from Homo sapiens)
- Palmitic acid (256 Da, Ligand)
- Guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 (37 kDa, Protein from Homo sapiens)
- Guanine nucleotide-binding protein g(s) subunit alpha isoforms short (45 kDa, Protein from Homo sapiens)
- G-protein coupled receptor 3 (41 kDa, Protein from Homo sapiens)
- Active state, gpr3 complex with dominant negative g-alphas. (Complex from Homo sapiens)
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 8iew
Q-score: 0.472
To Be Published
Cryo-EM structure of Integrin AVB3
Resolution: 3.0 Å
EM Method: Single-particle
Fitted PDBs: 8ij5
Q-score: 0.538
To Be Published
- Cryo-em structure of integrin avb3 (Complex from Homo sapiens)
- Integrin beta-3 (51 kDa, Protein from Homo sapiens)
- Integrin alpha-v heavy chain (65 kDa, Protein from Homo sapiens)