Golden Shiner Reovirus Core Polar Vertex
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 8fjk
Q-score: 0.467
Stevens A, Cui Y, Shivakoti S, Zhou ZH
Protein Cell (2023) 14 pp. 544-548 [ Pubmed: 36856784 DOI: doi:10.1093/procel/pwad002 ]
- Rna (40-mer) (12 kDa, RNA from Golden shiner reovirus)
- Rna (30-mer) (9 kDa, RNA from Golden shiner reovirus)
- Rna (52-mer) (16 kDa, RNA from Golden shiner reovirus)
- Clamp protein vp6 (44 kDa, Protein from Golden shiner reovirus)
- Outer capsid protein vp1 (141 kDa, Protein from Golden shiner reovirus)
- Microtubule-associated protein vp5 (79 kDa, Protein from Golden shiner reovirus)
- Zinc ion (65 Da, Ligand)
- Golden shiner reovirus (47 MDa, Virus from Golden shiner reovirus)
- Rna (38-mer) (12 kDa, RNA from Golden shiner reovirus)
- Rna-directed rna polymerase vp2 (141 kDa, Protein from Golden shiner reovirus)
- Major inner capsid protein vp3 (9 kDa, Protein from Golden shiner reovirus)
- Rna (18-mer) (5 kDa, RNA from Golden shiner reovirus)
- Major inner capsid protein vp3 (124 kDa, Protein from Golden shiner reovirus)
- Rna (60-mer) (19 kDa, RNA from Golden shiner reovirus)
Golden shiner reovirus tropical vertex missing TEC
Stevens A, Cui Y, Shivakoti S, Zhou ZH
Protein Cell (2023) 14 pp. 544-548 [ Pubmed: 36856784 DOI: doi:10.1093/procel/pwad002 ]
- Golden shiner reovirus (47 MDa, Virus from Golden shiner reovirus)
Golden shiner reovirus inner capsid particle
Stevens A, Cui Y, Shivakoti S, Zhou ZH
Protein Cell (2023) 14 pp. 544-548 [ Pubmed: 36856784 DOI: doi:10.1093/procel/pwad002 ]
- Golden shiner reovirus (47 MDa, Virus from Golden shiner reovirus)
Golden Shiner Reovirus Core Tropical Vertex
Resolution: 3.27 Å
EM Method: Single-particle
Fitted PDBs: 8fjl
Q-score: 0.465
Stevens A, Cui Y, Shivakoti S, Zhou ZH
Protein Cell (2023) 14 pp. 544-548 [ Pubmed: 36856784 DOI: doi:10.1093/procel/pwad002 ]
- Rna (52-mer) (16 kDa, RNA from Golden shiner reovirus)
- Clamp protein vp6 (44 kDa, Protein from Golden shiner reovirus)
- Outer capsid protein vp1 (141 kDa, Protein from Golden shiner reovirus)
- Microtubule-associated protein vp5 (79 kDa, Protein from Golden shiner reovirus)
- Rna (30-mer) (12 kDa, RNA from Golden shiner reovirus)
- Zinc ion (65 Da, Ligand)
- Golden shiner reovirus (47 MDa, Virus from Golden shiner reovirus)
- Rna-directed rna polymerase vp2 (141 kDa, Protein from Golden shiner reovirus)
- Major inner capsid protein vp3 (9 kDa, Protein from Golden shiner reovirus)
- Rna (39-mer) (12 kDa, RNA from Golden shiner reovirus)
- Rna (38-mer) (8 kDa, RNA from Golden shiner reovirus)
- Major inner capsid protein vp3 (124 kDa, Protein from Golden shiner reovirus)
- Rna (60-mer) (19 kDa, RNA from Golden shiner reovirus)
CryoEM structures of bAE1 captured in multiple states.
Resolution: 4.4 Å
EM Method: Single-particle
Fitted PDBs: 8d9n
Q-score: 0.284
Zhekova HR, Jiang J, Wang W, Tsirulnikov K, Kayik G, Khan HM, Azimov R, Abuladze N, Kao L, Newman D, Noskov SY, Tieleman DP, Hong Zhou Z, Pushkin A, Kurtz I
Commun Biol (2022) 5 pp. 1372-1372 [ Pubmed: 36517642 DOI: doi:10.1038/s42003-022-04306-8 ]
- Band 3 anion transport protein (104 kDa, Cellular component from Bos taurus)
- Anion exchange protein (104 kDa, Protein from Bos taurus)
CryoEM structures of bAE1 captured in multiple states.
Resolution: 6.0 Å
EM Method: Single-particle
Fitted PDBs: 8e34
Q-score: 0.179
Zhekova HR, Jiang J, Wang W, Tsirulnikov K, Kayik G, Khan HM, Azimov R, Abuladze N, Kao L, Newman D, Noskov SY, Tieleman DP, Hong Zhou Z, Pushkin A, Kurtz I
Commun Biol (2022) 5 pp. 1372-1372 [ Pubmed: 36517642 DOI: doi:10.1038/s42003-022-04306-8 ]
- Band 3 anion transport protein (104 kDa, Cellular component from Bos taurus)
- Anion exchange protein (104 kDa, Protein from Bos taurus)
CryoEM structures of bAE1 captured in multiple states.
Resolution: 6.3 Å
EM Method: Single-particle
Fitted PDBs: 8eeq
Q-score: 0.154
Zhekova HR, Jiang J, Wang W, Tsirulnikov K, Kayik G, Khan HM, Azimov R, Abuladze N, Kao L, Newman D, Noskov SY, Tieleman DP, Hong Zhou Z, Pushkin A, Kurtz I
Commun Biol (2022) 5 pp. 1372-1372 [ DOI: doi:10.1038/s42003-022-04306-8 Pubmed: 36517642 ]
- Full-length bovine band 3 anion transport protein. (104 kDa, Cellular component from Bos taurus)
- Anion exchange protein (104 kDa, Protein from Bos taurus)
Full-length APOBEC3G in complex with HIV-1 Vif, CBF-beta, and fork RNA
Resolution: 3.57 Å
EM Method: Single-particle
Fitted PDBs: 8e40
Q-score: 0.343
Ito F, Alvarez-Cabrera AL, Liu S, Yang H, Shiriaeva A, Zhou ZH, Chen XS
Sci Adv (2023) 9 pp. eade3168-eade3168 [ DOI: doi:10.1126/sciadv.ade3168 Pubmed: 36598981 ]
- Complex of apobec3g with hiv-1 vif and cbf-beta bound to fork rna (99 kDa, Complex from Human immunodeficiency virus 1)
- Rna (6 kDa, RNA from Escherichia coli)
- Core-binding factor subunit beta (18 kDa, Protein from Homo sapiens)
- Dna dc->du-editing enzyme apobec-3g (45 kDa, Protein from Macaca mulatta)
- Rna (8 kDa, RNA from Escherichia coli)
- Virion infectivity factor (21 kDa, Protein from Human immunodeficiency virus 1)
- Zinc ion (65 Da, Ligand)
APOBEC3G in complex with HIV-1 Vif/CBF-beta/EloB/EloC/Cul5/Rbx2
Ito F, Alvarez-Cabrera AL, Liu S, Yang H, Shiriaeva A, Zhou ZH, Chen XS
Sci Adv (2023) 9 pp. eade3168-eade3168 [ DOI: doi:10.1126/sciadv.ade3168 Pubmed: 36598981 ]
- Elongin-b (Protein from Homo sapiens)
- Elongin-c (Protein from Homo sapiens)
- Ring-box protein 2 (Protein from Homo sapiens)
- Core-binding factor subunit beta (Protein from Homo sapiens)
- Virion infectivity factor (Protein from Human immunodeficiency virus 1)
- Apobec3g (Protein from Macaca mulatta)
- Cullin-5 (Protein from Homo sapiens)
- Complex of apobec3g with hiv-1 vif, cbf-beta, elongin-b, elongin-c, cullin-5, and ring-box protein 2 (210 kDa, Complex from Human immunodeficiency virus 1)
Ito F, Alvarez-Cabrera AL, Liu S, Yang H, Shiriaeva A, Zhou ZH, Chen XS
Sci Adv (2023) 9 pp. eade3168-eade3168 [ DOI: doi:10.1126/sciadv.ade3168 Pubmed: 36598981 ]
- Apobec3g dimer mediated by rna (108 kDa, Complex from Macaca mulatta)
- Apobec3g (Protein from Macaca mulatta)