EMDB < Search results

EMBL

was set up in 1974 as Europe’s flagship laboratory for the life sciences – an intergovernmental organisation with more than 80 independent research groups covering the spectrum of molecular biology:

Research:

perform basic research in molecular biology

Services:

offer vital services to scientists in the member states

Training

scientists, students and visitors at all levels

Transfer

and development of technology

Develop

new instruments and methods

Integrating

life science research in Europe

More about EMBL

Six sites

represent EMBL in Europe.

Barcelona

Tissue biology and disease modelling

Grenoble

Structural biology

Hamburg

Structural biology

Heidelberg

Main laboratory

Hinxton

EMBL-EBI: European Bioinformatics Institute

Rome

Epigenetics and neurobiology

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initial_angle_assignment_type:"MAXIMUM LIKELIHOOD" AND author_orcid:"0000-0002-8373-4717" AND author_orcid:"0000-0002-0561-1981" AND film_detector_model:"FEI FALCON IV (4K X 4K)"

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EMDB [3]

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EMD-27875

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Full-length APOBEC3G in complex with HIV-1 Vif, CBF-beta, and fork RNA

Release date: Jan. 11, 2023
Resolution: 3.57 Å
EM Method: Single-particle
Fitted PDBs: 8e40
Q-score: 0.343

Ito F, Alvarez-Cabrera AL, Liu S, Yang H, Shiriaeva A, Zhou ZH, Chen XS

Sci Adv (2023) 9 pp. eade3168-eade3168 [ DOI: doi:10.1126/sciadv.ade3168 Pubmed: 36598981 ]

Sample:

Complex of apobec3g with hiv-1 vif and cbf-beta bound to fork rna (99 kDa, Complex from Human immunodeficiency virus 1)
Rna (6 kDa, RNA from Escherichia coli)
Core-binding factor subunit beta (18 kDa, Protein from Homo sapiens)
Dna dc->du-editing enzyme apobec-3g (45 kDa, Protein from Macaca mulatta)
Rna (8 kDa, RNA from Escherichia coli)
Virion infectivity factor (21 kDa, Protein from Human immunodeficiency virus 1)
Zinc ion (65 Da, Ligand)

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EMD-27885

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APOBEC3G in complex with HIV-1 Vif/CBF-beta/EloB/EloC/Cul5/Rbx2

Release date: Jan. 11, 2023
Resolution: 5.4 Å
EM Method: Single-particle

Ito F, Alvarez-Cabrera AL, Liu S, Yang H, Shiriaeva A, Zhou ZH, Chen XS

Sci Adv (2023) 9 pp. eade3168-eade3168 [ DOI: doi:10.1126/sciadv.ade3168 Pubmed: 36598981 ]

Sample:

Elongin-b (Protein from Homo sapiens)
Elongin-c (Protein from Homo sapiens)
Ring-box protein 2 (Protein from Homo sapiens)
Core-binding factor subunit beta (Protein from Homo sapiens)
Virion infectivity factor (Protein from Human immunodeficiency virus 1)
Apobec3g (Protein from Macaca mulatta)
Cullin-5 (Protein from Homo sapiens)
Complex of apobec3g with hiv-1 vif, cbf-beta, elongin-b, elongin-c, cullin-5, and ring-box protein 2 (210 kDa, Complex from Human immunodeficiency virus 1)

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EMD-27887

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RNA-mediated APOBEC3G dimer

Release date: Jan. 11, 2023
Resolution: 4.5 Å
EM Method: Single-particle

Ito F, Alvarez-Cabrera AL, Liu S, Yang H, Shiriaeva A, Zhou ZH, Chen XS

Sci Adv (2023) 9 pp. eade3168-eade3168 [ DOI: doi:10.1126/sciadv.ade3168 Pubmed: 36598981 ]

Sample:

Apobec3g dimer mediated by rna (108 kDa, Complex from Macaca mulatta)
Apobec3g (Protein from Macaca mulatta)

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Display: Statistics

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EMDB [3]

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