structure of influenza D virus apo polymerase
Resolution: 4.6 Å
EM Method: Single-particle
Fitted PDBs: 6kv5
Q-score: 0.213
Peng Q, Liu Y, Peng R, Wang M, Yang W, Song H, Chen Y, Liu S, Han M, Zhang X, Wang P, Yan J, Zhang B, Qi J, Deng T, Gao GF, Shi Y
Nat Microbiol (2019) [ DOI: doi:10.1038/s41564-019-0487-5 Pubmed: 31209309 ]
- Rna-directed rna polymerase catalytic subunit (86 kDa, Protein from Influenza D virus (D/swine/Oklahoma/1334/2011))
- Polymerase pb2 (88 kDa, Protein from Influenza D virus (D/swine/Oklahoma/1334/2011))
- Polymerase 3 (83 kDa, Protein from Influenza D virus (D/swine/Oklahoma/1334/2011))
- Influenza d virus polymerase (270 kDa, Complex from Thogotovirus)
Structure of influenza D virus polymerase bound to vRNA promoter in mode A conformation (class A1)
Resolution: 3.9 Å
EM Method: Single-particle
Fitted PDBs: 6kuk
Q-score: 0.403
Peng Q, Liu Y, Peng R, Wang M, Yang W, Song H, Chen Y, Liu S, Han M, Zhang X, Wang P, Yan J, Zhang B, Qi J, Deng T, Gao GF, Shi Y
Nat Microbiol (2019) [ DOI: doi:10.1038/s41564-019-0487-5 Pubmed: 31209309 ]
- Influenza d virus polymerase bound to vrna promoter (290 kDa, Complex from Influenza D virus)
- Rna-directed rna polymerase catalytic subunit (86 kDa, Protein from Influenza D virus (D/swine/Oklahoma/1334/2011))
- Polymerase 3 (83 kDa, Protein from Influenza D virus (D/swine/Oklahoma/1334/2011))
- Rna (5'-r(p*cp*up*cp*cp*up*gp*cp*up*up*ap*up*gp*cp*u)-3') (4 kDa, RNA from synthetic construct)
- Rna (5'-r(p*ap*gp*cp*ap*gp*up*ap*gp*cp*ap*ap*gp*gp*ap*g)-3') (4 kDa, RNA from synthetic construct)
- Polymerase pb2 (88 kDa, Protein from Influenza D virus (D/swine/Oklahoma/1334/2011))
Structure of influenza D virus polymerase bound to vRNA promoter in Mode A conformation(Class A2)
Resolution: 4.3 Å
EM Method: Single-particle
Fitted PDBs: 6kup
Q-score: 0.326
Peng Q, Liu Y, Peng R, Wang M, Yang W, Song H, Chen Y, Liu S, Han M, Zhang X, Wang P, Yan J, Zhang B, Qi J, Deng T, Gao GF, Shi Y
Nat Microbiol (2019) [ DOI: doi:10.1038/s41564-019-0487-5 Pubmed: 31209309 ]
- Influenza d virus polymerase (270 kDa, Complex from Influenza D virus)
- Polymerase 3 (83 kDa, Protein from Influenza D virus)
- Rna (5'-r(p*cp*up*cp*cp*up*gp*cp*up*up*ap*up*gp*cp*u)-3') (4 kDa, RNA from synthetic construct)
- Rna-directed rna polymerase catalytic subunit (86 kDa, Protein from Influenza D virus)
- Rna (5'-r(p*ap*gp*cp*ap*gp*up*ap*gp*cp*ap*ap*gp*gp*ap*g)-3') (4 kDa, RNA from synthetic construct)
- Polymerase pb2 (88 kDa, Protein from Influenza D virus (D/swine/Oklahoma/1334/2011))
structure of influenza D virus polymerase bound to vRNA promoter in Mode B conformation (Class B2)
Resolution: 4.1 Å
EM Method: Single-particle
Fitted PDBs: 6kut
Q-score: 0.358
Peng Q, Liu Y, Peng R, Wang M, Yang W, Song H, Chen Y, Liu S, Han M, Zhang X, Wang P, Yan J, Zhang B, Qi J, Deng T, Gao GF, Shi Y
Nat Microbiol (2019) [ DOI: doi:10.1038/s41564-019-0487-5 Pubmed: 31209309 ]
- Influenza d virus polymerase bound to vrna promoter in mode b conformation (class b2) (270 kDa, Complex from Thogotovirus)
- Polymerase 3 (83 kDa, Protein from Influenza D virus)
- Rna (5'-r(p*cp*up*cp*cp*up*gp*cp*up*up*ap*up*gp*cp*u)-3') (4 kDa, RNA from synthetic construct)
- Rna-directed rna polymerase catalytic subunit (86 kDa, Protein from Influenza D virus)
- Rna (5'-r(p*ap*gp*cp*ap*gp*up*ap*gp*cp*ap*ap*gp*gp*ap*g)-3') (4 kDa, RNA from synthetic construct)
- Polymerase pb2 (88 kDa, Protein from Influenza D virus (D/swine/Oklahoma/1334/2011))
Structure of influenza D virus polymerase bound to vRNA promoter in Mode B conformation (Class B1)
Resolution: 3.7 Å
EM Method: Single-particle
Fitted PDBs: 6kur
Q-score: 0.42
Peng Q, Liu Y, Peng R, Wang M, Yang W, Song H, Chen Y, Liu S, Han M, Zhang X, Wang P, Yan J, Zhang B, Qi J, Deng T, Gao GF, Shi Y
Nat Microbiol (2019) [ DOI: doi:10.1038/s41564-019-0487-5 Pubmed: 31209309 ]
- Rna-directed rna polymerase catalytic subunit (86 kDa, Protein from Influenza D virus (D/swine/Oklahoma/1334/2011))
- Influenza d virus polymerase bound to vrna promoter (270 kDa, Complex from Influenza D virus)
- Polymerase 3 (83 kDa, Protein from Influenza D virus (D/swine/Oklahoma/1334/2011))
- Rna (5'-r(p*cp*up*cp*cp*up*gp*cp*up*up*ap*up*gp*cp*u)-3') (4 kDa, RNA from synthetic construct)
- Polymerase pb2 (29 kDa, Protein from Influenza D virus (D/swine/Oklahoma/1334/2011))
- Rna (5'-r(p*ap*gp*cp*ap*gp*up*ap*gp*cp*ap*ap*gp*gp*ap*g)-3') (4 kDa, RNA from synthetic construct)
Structure of influenza D virus polymerase bound to vRNA promoter in Mode B conformation (Class B3)
Peng Q, Liu Y, Peng R, Wang M, Yang W, Song H, Chen Y, Liu S, Han M, Zhang X, Wang P, Yan J, Zhang B, Qi J, Deng T, Gao GF, Shi Y
Nat Microbiol (2019) 4 pp. 1750-1759 [ DOI: doi:10.1038/s41564-019-0487-5 Pubmed: 31209309 ]
- Rna-directed rna polymerase catalytic subunit (86 kDa, Protein from Influenza D virus (D/swine/Oklahoma/1334/2011))
- Polymerase 3 (83 kDa, Protein from Influenza D virus (D/swine/Oklahoma/1334/2011))
- Rna (5'-r(p*cp*up*cp*cp*up*gp*cp*up*up*ap*up*gp*cp*u)-3') (4 kDa, RNA from synthetic construct)
- Polymerase pb2 (29 kDa, Protein from Influenza D virus (D/swine/Oklahoma/1334/2011))
- Influenza d virus polymerase boud to vrna promoter (270 kDa, Complex from Influenza D virus)
- Rna (5'-r(p*ap*gp*cp*ap*gp*up*ap*gp*cp*ap*ap*gp*gp*ap*g)-3') (4 kDa, RNA from synthetic construct)
Structure of influenza D virus polymerase bound to cRNA promoter in class 1
Resolution: 3.44 Å
EM Method: Single-particle
Fitted PDBs: 6kuj
Q-score: 0.481
Peng Q, Liu Y, Peng R, Wang M, Yang W, Song H, Chen Y, Liu S, Han M, Zhang X, Wang P, Yan J, Zhang B, Qi J, Deng T, Gao GF, Shi Y
Nat Microbiol (2019) [ DOI: doi:10.1038/s41564-019-0487-5 Pubmed: 31209309 ]
- Rna (5'-r(p*up*cp*cp*up*up*gp*cp*up*ap*cp*up*gp*cp*u)-3') (4 kDa, RNA from synthetic construct)
- Polymerase 3 (83 kDa, Protein from Influenza D virus)
- Rna (5'-r(p*ap*gp*cp*ap*up*ap*ap*gp*cp*ap*gp*gp*ap*gp*a)-3') (4 kDa, RNA from synthetic construct)
- Polymerase pb2 (88 kDa, Protein from Influenza D virus)
- Influenza d virus polymerase bound to crna promoter in mode a conformation (270 kDa, Complex from Influenza D virus)
- Rna-directed rna polymerase catalytic subunit (86 kDa, Protein from Influenza D virus)
Structure of influenza D virus polymerase bound to cRNA promoter in class 2
Resolution: 4.1 Å
EM Method: Single-particle
Fitted PDBs: 6kuv
Q-score: 0.341
Peng Q, Liu Y, Peng R, Wang M, Yang W, Song H, Chen Y, Liu S, Han M, Zhang X, Wang P, Yan J, Zhang B, Qi J, Deng T, Gao GF, Shi Y
Nat Microbiol (2019) [ DOI: doi:10.1038/s41564-019-0487-5 Pubmed: 31209309 ]
- Rna (5'-r(p*up*cp*cp*up*up*gp*cp*up*ap*cp*up*gp*cp*u)-3') (4 kDa, RNA from synthetic construct)
- Polymerase 3 (83 kDa, Protein from Influenza D virus)
- Rna (5'-r(p*ap*gp*cp*ap*up*ap*ap*gp*cp*ap*gp*gp*ap*gp*a)-3') (4 kDa, RNA from synthetic construct)
- Polymerase pb2 (88 kDa, Protein from Influenza D virus)
- Rna-directed rna polymerase catalytic subunit (86 kDa, Protein from Influenza D virus)
- Influenza d virus polymerase bound to crna promoter in mode b conformation (270 kDa, Complex from Influenza D virus)