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electron_source:"FIELD EMISSION GUN"
SARS-CoV2 Omicron BA.1 spike in complex with CAB-A17 antibody
To Be Published
Sample:
- Sars-cov2 omicron ba.1 spike (Complex from Severe acute respiratory syndrome coronavirus 2)
- Cab-a17 antibody (fab) (Complex from Enterobacteria phage T4)
- Sars-cov2 omicron ba.1 spike in complex with cab-a17 antibody (95 kDa, Complex)
- Cab-a17 antibody (lc) (23 kDa, Protein from Homo sapiens)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Spike glycoprotein (124 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- Cab-a17 antibody (hc) (22 kDa, Protein from Homo sapiens)
Thogoto virus polymerase in Mode B conformation and bound to 32-mer loop promoter RNA
Release date: May 22, 2024
Resolution: 2.87 Å
EM Method: Single-particle
Fitted PDBs: 8p0b
Q-score: 0.514
Resolution: 2.87 Å
EM Method: Single-particle
Fitted PDBs: 8p0b
Q-score: 0.514
To Be Published
Sample:
- 3'rna (10 kDa, RNA from Thogotovirus thogotoense)
- Polymerase basic protein 2 (88 kDa, Protein from Thogotovirus thogotoense)
- Polymerase acidic protein (71 kDa, Protein from Thogotovirus thogotoense)
- Thogotovirus rna-directed rna polymerase (240 kDa, Complex from Thogotovirus thogotoense)
- Rna-directed rna polymerase catalytic subunit (81 kDa, Protein from Thogotovirus thogotoense)
Thogoto virus polymerase in Mode A conformation and bound to 35-mer loop promoter RNA
To Be Published
Sample:
- Magnesium ion (24 Da, Ligand)
- Polymerase basic protein 2 (88 kDa, Protein from Thogotovirus thogotoense)
- 5'rna (11 kDa, RNA from Thogotovirus thogotoense)
- Polymerase acidic protein (71 kDa, Protein from Thogotovirus thogotoense)
- Thogotovirus rna-directed rna polymerase (240 kDa, Complex from Thogotovirus thogotoense)
- Rna-directed rna polymerase catalytic subunit (81 kDa, Protein from Thogotovirus thogotoense)
Grimm C, Jungwirth S, Fischer U
To Be Published
Sample:
- Dna-directed rna polymerase 30 kda polypeptide (29 kDa, Protein from Vaccinia virus)
- Dna-directed rna polymerase 147 kda polypeptide (146 kDa, Protein from Vaccinia virus)
- Water (18 Da, Ligand)
- Dna-directed rna polymerase 18 kda subunit (17 kDa, Protein from Vaccinia virus)
- Dna-directed rna polymerase 19 kda subunit (19 kDa, Protein from Vaccinia virus)
- Dna-directed rna polymerase 7 kda subunit (7 kDa, Protein from Vaccinia virus)
- Non-template dna oligomer and template dna oligomer (Complex from Vaccinia virus)
- Template dna oligomer (21 kDa, DNA from Vaccinia virus)
- Dna-directed rna polymerase 22 kda subunit (21 kDa, Protein from Vaccinia virus)
- Mrna-capping enzyme catalytic subunit (96 kDa, Protein from Vaccinia virus)
- Zinc ion (65 Da, Ligand)
- Vaccinia dna-directed rna polymerase open promoter intermediate pre-initiation complex (750 kDa, Complex)
- Intermediate transcription factor 3 large subunit (44 kDa, Protein from Vaccinia virus)
- Dna-directed rna polymerase 35 kda subunit (35 kDa, Protein from Vaccinia virus)
- Vaccinia dna-directed rna polymerase open promoter intermediate pre-initiation complex (Complex from Vaccinia virus)
- Magnesium ion (24 Da, Ligand)
- Dna-directed rna polymerase 133 kda polypeptide (133 kDa, Protein from Vaccinia virus)
- Intermediate transcription factor 3 small subunit (33 kDa, Protein from Vaccinia virus)
- Mrna-capping enzyme regulatory subunit opg124 (33 kDa, Protein from Vaccinia virus)
- Non-template dna oligomer (21 kDa, DNA from Vaccinia virus)
Grimm C, Jungwirth S, Fischer U
To Be Published
Sample:
- Dna-directed rna polymerase 18 kda subunit (17 kDa, Protein from Vaccinia virus)
- Template dna oligomer (Complex from Vaccinia virus)
- Dna-directed rna polymerase 19 kda subunit (19 kDa, Protein from Vaccinia virus)
- Magnesium ion (24 Da, Ligand)
- Dna-directed rna polymerase 133 kda polypeptide (133 kDa, Protein from Vaccinia virus)
- Dna-directed rna polymerase 7 kda subunit (7 kDa, Protein from Vaccinia virus)
- Mrna-capping enzyme catalytic subunit (96 kDa, Protein from Vaccinia virus)
- Dna-directed rna polymerase 30 kda polypeptide (29 kDa, Protein from Vaccinia virus)
- Dna-directed rna polymerase 147 kda polypeptide (146 kDa, Protein from Vaccinia virus)
- Template dna oligomer (21 kDa, DNA from Vaccinia virus)
- Non-template dna oligomer (21 kDa, DNA from Vaccinia virus)
- Zinc ion (65 Da, Ligand)
- Vaccinia dna-directed rna polymerase open promoter intermediate pre-initiation complex (750 kDa, Complex)
- Dna-directed rna polymerase 22 kda subunit (21 kDa, Protein from Vaccinia virus)
- Intermediate transcription factor 3 small subunit (33 kDa, Protein from Vaccinia virus)
- Intermediate transcription factor 3 large subunit (44 kDa, Protein from Vaccinia virus)
- Dna-directed rna polymerase 35 kda subunit (35 kDa, Protein from Vaccinia virus)
- Vaccinia dna-directed rna polymerase open promoter intermediate pre-initiation complex (Complex from Vaccinia virus)
Grimm C, Jungwirth S, Fischer U
To Be Published
Sample:
- Dna-directed rna polymerase 18 kda subunit (17 kDa, Protein from Vaccinia virus)
- Dna-directed rna polymerase 19 kda subunit (19 kDa, Protein from Vaccinia virus)
- Magnesium ion (24 Da, Ligand)
- Dna-directed rna polymerase 133 kda polypeptide (133 kDa, Protein from Vaccinia virus)
- Dna-directed rna polymerase 7 kda subunit (7 kDa, Protein from Vaccinia virus)
- Mrna-capping enzyme catalytic subunit (96 kDa, Protein from Vaccinia virus)
- Dna-directed rna polymerase 30 kda polypeptide (29 kDa, Protein from Vaccinia virus)
- Dna-directed rna polymerase 147 kda polypeptide (146 kDa, Protein from Vaccinia virus)
- Mrna-capping enzyme regulatory subunit opg124 (33 kDa, Protein from Vaccinia virus)
- Template dna oligomer (21 kDa, DNA from Vaccinia virus)
- Non-template dna oligomer (21 kDa, DNA from Vaccinia virus)
- Zinc ion (65 Da, Ligand)
- Vaccinia dna-directed rna polymerase open promoter intermediate pre-initiation complex (750 kDa, Complex from Vaccinia virus)
- Dna-directed rna polymerase 22 kda subunit (21 kDa, Protein from Vaccinia virus)
- Intermediate transcription factor 3 small subunit (33 kDa, Protein from Vaccinia virus)
- Intermediate transcription factor 3 large subunit (44 kDa, Protein from Vaccinia virus)
- Dna-directed rna polymerase 35 kda subunit (35 kDa, Protein from Vaccinia virus)
CryoEM structure of 20S Trichomonas vaginalis proteasome in complex with proteasome inhibitor CP-17
Silhan J, Fajtova P, O'Donoghue A, Boura E
To Be Published
Sample:
- Ternary complex of 20s proteasome from trichomonas vaginalis (704 kDa, Complex from Trichomonas vaginalis G3)
- Proteasome subunit beta (22 kDa, Protein from Trichomonas vaginalis G3)
- Proteasome subunit alpha type (27 kDa, Protein from Trichomonas vaginalis G3)
- Proteasome subunit beta (23 kDa, Protein from Trichomonas vaginalis G3)
- Family t1, proteasome alpha subunit, threonine peptidase (27 kDa, Protein from Trichomonas vaginalis G3)
- Proteasome endopeptidase complex (26 kDa, Protein from Trichomonas vaginalis G3)
- Family t1, proteasome alpha subunit, threonine peptidase (26 kDa, Protein from Trichomonas vaginalis G3)
- N-[(2s)-1-[[(2s)-1-[[(1s)-1-[(2s,3r,5s,6r)-3-(hydroxymethyl)-5-methanoyl-2,3,6-trimethyl-morpholin-2-yl]-2-phenyl-ethyl]amino]-3-(1h-indol-3-yl)-1-oxidanylidene-propan-2-yl]amino]-3-(1h-indol-3-yl)-1-oxidanylidene-propan-2-yl]hexanamide (776 Da, Ligand)
- Proteasome subunit alpha type (27 kDa, Protein from Trichomonas vaginalis G3)
- Family t1, proteasome alpha subunit, threonine peptidase (25 kDa, Protein from Trichomonas vaginalis G3)
- Family t1, proteasome beta subunit, threonine peptidase (26 kDa, Protein from Trichomonas vaginalis G3)
- Family t1, proteasome alpha subunit, threonine peptidase (25 kDa, Protein from Trichomonas vaginalis G3)
- Proteasome subunit alpha type (26 kDa, Protein from Trichomonas vaginalis G3)
- Proteasome subunit beta (25 kDa, Protein from Trichomonas vaginalis G3)
- Proteasome subunit beta (21 kDa, Protein from Trichomonas vaginalis G3)
- Proteasome subunit beta (21 kDa, Protein from Trichomonas vaginalis G3)
To Be Published
Sample:
- Magnesium ion (24 Da, Ligand)
- Thogotovirus rna-directed rna polymerase (Complex from Thogotovirus thogotoense)
- 3'rna (10 kDa, RNA from Thogotovirus thogotoense)
- Polymerase basic protein 2 (88 kDa, Protein from Thogotovirus thogotoense)
- Polymerase acidic protein (71 kDa, Protein from Thogotovirus thogotoense)
- Rna-directed rna polymerase catalytic subunit (81 kDa, Protein from Thogotovirus thogotoense)
E167K RF2 on E. coli 70S release complex with UGG (Structure I)
Pundir S, Larsson DSD, Selmer M, Sanyal S
To Be Published
Sample:
- 50s ribosomal protein l23 (11 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l15 (15 kDa, Protein from Escherichia coli)
- Ribosome release complex (2 MDa, Complex from Escherichia coli)
- 50s ribosomal protein l20 (13 kDa, Protein from Escherichia coli)
- Small ribosomal subunit protein us10 (11 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l2 (29 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l3 (22 kDa, Protein from Escherichia coli)
- 1,4-diaminobutane (88 Da, Ligand)
- Small ribosomal subunit protein us5 (17 kDa, Protein from Escherichia coli)
- Small ribosomal subunit protein us2 (26 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l29 (7 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l22 (12 kDa, Protein from Escherichia coli)
- Small ribosomal subunit protein us9 (14 kDa, Protein from Escherichia coli)
- Small ribosomal subunit protein us17 (9 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l18 (12 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l33 (6 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l6 (18 kDa, Protein from Escherichia coli)
- Small ribosomal subunit protein us15 (10 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l27 (9 kDa, Protein from Escherichia coli)
- Small ribosomal subunit protein bs20 (9 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l4 (22 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l28 (9 kDa, Protein from Escherichia coli)
- 16s rrna (499 kDa, RNA from Escherichia coli)
- 50s ribosomal protein l36 (4 kDa, Protein from Escherichia coli)
- Small ribosomal subunit protein bs18 (9 kDa, Protein from Escherichia coli)
- Peptide chain release factor rf2 (41 kDa, Protein from Escherichia coli K-12)
- Trna(fmet) (24 kDa, RNA from Escherichia coli)
- Mrna (15 kDa, RNA from Escherichia coli)
- 50s ribosomal protein l9 (15 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l24 (11 kDa, Protein from Escherichia coli)
- Small ribosomal subunit protein bs16 (9 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s6 (15 kDa, Protein from Escherichia coli)
- Small ribosomal subunit protein us14 (11 kDa, Protein from Escherichia coli)
- Spermidine (145 Da, Ligand)
- 30s ribosomal protein s7 (20 kDa, Protein from Escherichia coli)
- Small ribosomal subunit protein us11 (13 kDa, Protein from Escherichia coli)
- Small ribosomal subunit protein us4 (23 kDa, Protein from Escherichia coli)
- Small ribosomal subunit protein us8 (14 kDa, Protein from Escherichia coli)
- Small ribosomal subunit protein us3 (26 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l34 (5 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l19 (13 kDa, Protein from Escherichia coli)
- Zinc ion (65 Da, Ligand)
- 50s ribosomal protein l5 (20 kDa, Protein from Escherichia coli)
- Small ribosomal subunit protein us12 (13 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l21 (11 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l11 (14 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l30 (6 kDa, Protein from Escherichia coli)
- Small ribosomal subunit protein us13 (13 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l14 (13 kDa, Protein from Escherichia coli)
- Magnesium ion (24 Da, Ligand)
- 50s ribosomal protein l32 (6 kDa, Protein from Escherichia coli)
- 5s rrna (38 kDa, RNA from Escherichia coli)
- Small ribosomal subunit protein bs21 (8 kDa, Protein from Escherichia coli)
- Spermine (202 Da, Ligand)
- 50s ribosomal protein l13 (16 kDa, Protein from Escherichia coli)
- 23s rrna (941 kDa, RNA from Escherichia coli)
- Large ribosomal subunit protein ul16 (15 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l17 (14 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l35 (7 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l25 (10 kDa, Protein from Escherichia coli)
- Small ribosomal subunit protein us19 (10 kDa, Protein from Escherichia coli)
- Large ribosomal subunit protein bl31a (7 kDa, Protein from Escherichia coli)
- Potassium ion (39 Da, Ligand)
E167K RF2 on E. coli 70S release complex with UGG (Structure II)
Release date: May 22, 2024
Resolution: 2.78 Å
EM Method: Single-particle
Fitted PDBs: 8p17
Q-score: 0.545
Resolution: 2.78 Å
EM Method: Single-particle
Fitted PDBs: 8p17
Q-score: 0.545
Pundir S, Larsson DSD, Selmer M, Sanyal S
To Be Published
Sample:
- 50s ribosomal protein l23 (11 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l15 (15 kDa, Protein from Escherichia coli)
- Ribosome release complex (2 MDa, Complex from Escherichia coli)
- 50s ribosomal protein l20 (13 kDa, Protein from Escherichia coli)
- Small ribosomal subunit protein us10 (11 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l2 (29 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l3 (22 kDa, Protein from Escherichia coli)
- 1,4-diaminobutane (88 Da, Ligand)
- Small ribosomal subunit protein us5 (17 kDa, Protein from Escherichia coli)
- Small ribosomal subunit protein us2 (26 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l29 (7 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l22 (12 kDa, Protein from Escherichia coli)
- Small ribosomal subunit protein us9 (14 kDa, Protein from Escherichia coli)
- Water (18 Da, Ligand)
- Small ribosomal subunit protein us17 (9 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l18 (12 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l33 (6 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l6 (18 kDa, Protein from Escherichia coli)
- Small ribosomal subunit protein us15 (10 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l27 (9 kDa, Protein from Escherichia coli)
- Small ribosomal subunit protein bs20 (9 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l4 (22 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l28 (9 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l36 (4 kDa, Protein from Escherichia coli)
- Small ribosomal subunit protein bs18 (9 kDa, Protein from Escherichia coli)
- Peptide chain release factor rf2 (41 kDa, Protein from Escherichia coli K-12)
- Trna(fmet) (24 kDa, RNA from Escherichia coli)
- Mrna (15 kDa, RNA from Escherichia coli)
- 50s ribosomal protein l9 (15 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l24 (11 kDa, Protein from Escherichia coli)
- Small ribosomal subunit protein bs16 (9 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s6 (15 kDa, Protein from Escherichia coli)
- Small ribosomal subunit protein us14 (11 kDa, Protein from Escherichia coli)
- Spermidine (145 Da, Ligand)
- 30s ribosomal protein s7 (20 kDa, Protein from Escherichia coli)
- Small ribosomal subunit protein us11 (13 kDa, Protein from Escherichia coli)
- Small ribosomal subunit protein us4 (23 kDa, Protein from Escherichia coli)
- Small ribosomal subunit protein us8 (14 kDa, Protein from Escherichia coli)
- Small ribosomal subunit protein us3 (26 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l34 (5 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l19 (13 kDa, Protein from Escherichia coli)
- Zinc ion (65 Da, Ligand)
- 50s ribosomal protein l5 (20 kDa, Protein from Escherichia coli)
- Small ribosomal subunit protein us12 (13 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l21 (11 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l11 (14 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l30 (6 kDa, Protein from Escherichia coli)
- Small ribosomal subunit protein us13 (13 kDa, Protein from Escherichia coli)
- 16s rna (499 kDa, RNA from Escherichia coli)
- 50s ribosomal protein l14 (13 kDa, Protein from Escherichia coli)
- Magnesium ion (24 Da, Ligand)
- 50s ribosomal protein l32 (6 kDa, Protein from Escherichia coli)
- 5s rrna (38 kDa, RNA from Escherichia coli)
- Small ribosomal subunit protein bs21 (8 kDa, Protein from Escherichia coli)
- Spermine (202 Da, Ligand)
- 50s ribosomal protein l13 (16 kDa, Protein from Escherichia coli)
- 23s rrna (941 kDa, RNA from Escherichia coli)
- Large ribosomal subunit protein ul16 (15 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l17 (14 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l35 (7 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l25 (10 kDa, Protein from Escherichia coli)
- Small ribosomal subunit protein us19 (10 kDa, Protein from Escherichia coli)
- Large ribosomal subunit protein bl31a (7 kDa, Protein from Escherichia coli)
- Potassium ion (39 Da, Ligand)