Structure of E6AP-E6 complex in Att1 state
Resolution: 2.6 Å
EM Method: Single-particle
Fitted PDBs: 8jrn
Q-score: 0.531
Wang Z, Fan F, Li Z, Ye F, Wang Q, Gao R, Qiu J, Lv Y, Lin M, Xu W, Luo C, Yu X
Nat Commun (2024) 15 pp. 3531-3531 [ DOI: doi:10.1038/s41467-024-47586-w Pubmed: 38670961 ]
- Zinc ion (65 Da, Ligand)
- Ubiquitin-protein ligase e3a (100 kDa, Protein from Homo sapiens)
- E6ap-e6 complex (Complex from Homo sapiens)
- Protein e6 (19 kDa, Protein from Human papillomavirus 16)
Resolution: 2.9 Å
EM Method: Single-particle
Fitted PDBs: 7xms
Q-score: 0.408
Zhao W, Han S, Qiu N, Feng W, Lu M, Zhang W, Wang M, Zhou Q, Chen S, Xu W, Du J, Chu X, Yi C, Dai A, Hu L, Shen MY, Sun Y, Zhang Q, Ma Y, Zhong W, Yang D, Wang MW, Wu B, Zhao Q
Cell Res (2022) 32 pp. 761-772 [ Pubmed: 35739238 DOI: doi:10.1038/s41422-022-00679-x ]
- Somatostatin receptor type 4 (40 kDa, Protein from Homo sapiens)
- Guanine nucleotide-binding protein g(i) subunit alpha-1 (40 kDa, Protein from Homo sapiens)
- Signle chain viable fragment of antibody (31 kDa, Protein from Mus musculus)
- Complex structure of somatostatin receptor 4 (sstr4) in complex with gi and its endogeneous ligand sst-14 (Complex from Homo sapiens)
- Guanine nucleotide-binding protein g(i)/g(s)/g(o) subunit gamma-2 (7 kDa, Protein from Homo sapiens)
- Guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 (38 kDa, Protein from Homo sapiens)
- Somatostatin-14 (1 kDa, Protein from Homo sapiens)
CryoEM structure of somatostatin receptor 4 (SSTR4) with Gi1 and J-2156
Resolution: 2.8 Å
EM Method: Single-particle
Fitted PDBs: 7xmt
Q-score: 0.424
Zhao W, Han S, Qiu N, Feng W, Lu M, Zhang W, Wang M, Zhou Q, Chen S, Xu W, Du J, Chu X, Yi C, Dai A, Hu L, Shen MY, Sun Y, Zhang Q, Ma Y, Zhong W, Yang D, Wang MW, Wu B, Zhao Q
Cell Res (2022) 32 pp. 761-772 [ Pubmed: 35739238 DOI: doi:10.1038/s41422-022-00679-x ]
- Single chain variable fragment of antibody (31 kDa, Protein from Mus musculus)
- Somatostatin receptor type 4 (40 kDa, Protein from Homo sapiens)
- Guanine nucleotide-binding protein g(i) subunit alpha-1 (40 kDa, Protein from Homo sapiens)
- Guanine nucleotide-binding protein g(i)/g(s)/g(o) subunit gamma-2 (7 kDa, Protein from Homo sapiens)
- Guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 (38 kDa, Protein from Homo sapiens)
- (2~{s})-2-[[(2~{s})-4-azanyl-2-[(4-methylnaphthalen-1-yl)sulfonylamino]butanoyl]amino]-3-phenyl-propanimidic acid (468 Da, Ligand)
- Complex structure of somatostatin receptor 4 (sstr4) with gi and j-2156 (Complex from Homo sapiens)
Cryo-EM Structure of Glycine max glutamine synthetase GmGS Beta2
Resolution: 2.9 Å
EM Method: Single-particle
Fitted PDBs: 7v4h
Q-score: 0.532
Chen Y, Xu W, Yu S, Ni K, She G, Ye X, Xing Q, Zhao J, Huang C
eLife (2021) 10 [ Pubmed: 34898426 DOI: doi:10.7554/eLife.72535 ]
- Gmgs beta2 (Cell from Glycine max)
- Glutamine synthetase (39 kDa, Protein from Glycine max)
Cryo-EM structure of the adhesion GPCR ADGRD1 in complex with miniGs
Resolution: 2.8 Å
EM Method: Single-particle
Fitted PDBs: 7wu2
Q-score: 0.53
Qu X, Qiu N, Wang M, Zhang B, Du J, Zhong Z, Xu W, Chu X, Ma L, Yi C, Han S, Shui W, Zhao Q, Wu B
Nature (2022) 604 pp. 779-785 [ DOI: doi:10.1038/s41586-022-04580-w Pubmed: 35418679 ]
- Nanobody nb35 (17 kDa, Protein from Lama glama)
- Adhesion g-protein coupled receptor d1 (38 kDa, Protein from Homo sapiens)
- The adhesion gpcr adgrd1 in complex with minigs (Complex from Homo sapiens)
- Nanobody nb35 (Complex from Lama glama)
- Guanine nucleotide-binding protein g(i)/g(s)/g(o) subunit gamma-2 (7 kDa, Protein from Homo sapiens)
- Guanine nucleotide-binding protein g(s) subunit alpha isoforms short (28 kDa, Protein from Homo sapiens)
- Guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 (38 kDa, Protein from Homo sapiens)
S protein of SARS-CoV-2 in complex with 2G1
Resolution: 2.7 Å
EM Method: Single-particle
Fitted PDBs: 7x08
Q-score: 0.458
Ma H, Guo Y, Tang H, Tseng CK, Wang L, Zong H, Wang Z, He Y, Chang Y, Wang S, Huang H, Ke Y, Yuan Y, Wu M, Zhang Y, Drelich A, Kempaiah KR, Peng BH, Wang A, Yang K, Yin H, Liu J, Yue Y, Xu W, Zhu S, Ji T, Zhang X, Wang Z, Li G, Liu G, Song J, Mu L, Xiang Z, Song Z, Chen H, Bian Y, Zhang B, Chen H, Zhang J, Liao Y, Zhang L, Yang L, Chen Y, Gilly J, Xiao X, Han L, Jiang H, Xie Y, Zhou Q, Zhu J
Cell Discov (2022) 8 pp. 16-16 [ DOI: doi:10.1038/s41421-022-00381-7 Pubmed: 35169121 ]
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Spike glycoprotein (142 kDa, Protein from Severe acute respiratory syndrome coronavirus)
- Light chain of 2g1 (22 kDa, Protein from Homo sapiens)
- S protein of sars-cov-2 (Complex from Severe acute respiratory syndrome coronavirus)
- Linoleic acid (280 Da, Ligand)
- Heavy chain of 2g1 (49 kDa, Protein from Homo sapiens)
- 2g1 (Complex from Homo sapiens)
- S protein of sars-cov-2 in complex with 2g1 (Complex)
Coxsackievirus B3 full particle at pH7.4 (VP3-234Q)
Resolution: 2.95 Å
EM Method: Single-particle
Fitted PDBs: 7vxh
Q-score: 0.622
Wang Q, Yang Q, Liu C, Wang G, Song H, Shang G, Peng R, Qu X, Liu S, Cui Y, Wang P, Xu W, Zhao X, Qi J, Yang M, Gao GF
PNAS (2022) 119 [ DOI: doi:10.1073/pnas.2118590119 Pubmed: 35046043 ]
- Capsid protein vp1 (31 kDa, Protein from Coxsackievirus B3)
- Coxsackievirus b3 (Virus from Coxsackievirus B3)
- Capsid protein vp3 (26 kDa, Protein from Coxsackievirus B3)
- Palmitic acid (256 Da, Ligand)
- Capsid protein vp4 (7 kDa, Protein from Coxsackievirus B3)
- Capsid protein vp2 (28 kDa, Protein from Coxsackievirus B3)
Coxsackievirus B3 full particle at pH7.4 (VP3-234N)
Resolution: 2.7 Å
EM Method: Single-particle
Fitted PDBs: 7vy0
Q-score: 0.516
Wang Q, Yang Q, Liu C, Wang G, Song H, Shang G, Peng R, Qu X, Liu S, Cui Y, Wang P, Xu W, Zhao X, Qi J, Yang M, Gao GF
PNAS (2022) 119 [ DOI: doi:10.1073/pnas.2118590119 Pubmed: 35046043 ]
- Capsid protein vp2 (28 kDa, Protein from Coxsackievirus B3)
- Coxsackievirus b3 (Virus from Coxsackievirus B3)
- Capsid protein vp1 (31 kDa, Protein from Coxsackievirus B3)
- Capsid protein vp4 (7 kDa, Protein from Coxsackievirus B3)
- Palmitic acid (256 Da, Ligand)
- Capsid protein vp3 (26 kDa, Protein from Coxsackievirus B3)
Resolution: 2.79 Å
EM Method: Single-particle
Fitted PDBs: 7vyk
Q-score: 0.566
Wang Q, Yang Q, Liu C, Wang G, Song H, Shang G, Peng R, Qu X, Liu S, Cui Y, Wang P, Xu W, Zhao X, Qi J, Yang M, Gao GF
PNAS (2022) 119 [ DOI: doi:10.1073/pnas.2118590119 Pubmed: 35046043 ]
- Capsid protein vp3 (26 kDa, Protein from Coxsackievirus B3)
- Coxsackievirus b3 (Complex from Coxsackievirus B3)
- Palmitic acid (256 Da, Ligand)
- Capsid protein vp1 (30 kDa, Protein from Coxsackievirus B3)
- Capsid protein vp1, vp2, vp3, vp4 (Complex from Homo sapiens)
- Capsid protein vp4 (7 kDa, Protein from Coxsackievirus B3)
- Coxsackievirus and adenovirus receptor (25 kDa, Protein from Homo sapiens)
- Capsid protein vp2 (28 kDa, Protein from Coxsackievirus B3)
- Coxsackievirus and adenovirus receptor (Complex)
Resolution: 2.79 Å
EM Method: Single-particle
Fitted PDBs: 7vyl
Q-score: 0.644
Wang Q, Yang Q, Liu C, Wang G, Song H, Shang G, Peng R, Qu X, Liu S, Cui Y, Wang P, Xu W, Zhao X, Qi J, Yang M, Gao GF
PNAS (2022) 119 [ DOI: doi:10.1073/pnas.2118590119 Pubmed: 35046043 ]
- Capsid protein vp3 (26 kDa, Protein from Coxsackievirus B3)
- Capsid protein vp1 (31 kDa, Protein from Coxsackievirus B3)
- Coxsackievirus b3 (Complex from Coxsackievirus B3)
- Capsid protein vp4 (7 kDa, Protein from Coxsackievirus B3)
- Coxsackievirus and adenovirus receptor (25 kDa, Protein from Homo sapiens)
- Capsid protein vp2 (28 kDa, Protein from Coxsackievirus B3)
- Homo sapiens (Virus from Homo sapiens)
- Coxsackievirus and adenovirus receptor (Complex)