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Structure of the transcription termination factor Rho bound to RNA at the PBS and SBS
Resolution: 2.9 Å
EM Method: Single-particle
Fitted PDBs: 8ptg
Q-score: 0.512
Said N, Finazzo M, Hilal T, Wang B, Selinger TL, Gjorgjevikj D, Artsimovitch I, Wahl MC
Nat Commun (2024) 15 pp. 3186-3186 [ DOI: doi:10.1038/s41467-024-47439-6 Pubmed: 38622114 ]
- Transcription termination factor rho (47 kDa, Protein from Escherichia coli)
- Rut rna (31 kDa, RNA from Escherichia coli)
- Beryllium trifluoride ion (66 Da, Ligand)
- Magnesium ion (24 Da, Ligand)
- Adenosine-5'-diphosphate (427 Da, Ligand)
- Rho-rna complex (Complex from Escherichia coli)
Structure of the transcription termination factor Rho in complex with Rof and ADP
Resolution: 2.9 Å
EM Method: Single-particle
Fitted PDBs: 8ptm
Q-score: 0.467
Said N, Finazzo M, Hilal T, Wang B, Selinger TL, Gjorgjevikj D, Artsimovitch I, Wahl MC
Nat Commun (2024) 15 pp. 3186-3186 [ DOI: doi:10.1038/s41467-024-47439-6 Pubmed: 38622114 ]
- Rho-rof complex (Complex from Escherichia coli)
- Transcription termination factor rho (47 kDa, Protein from Escherichia coli)
- Magnesium ion (24 Da, Ligand)
- Adenosine-5'-diphosphate (427 Da, Ligand)
- Protein rof (9 kDa, Protein from Escherichia coli)
Structure of the transcription termination factor Rho in complex with Rof
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 8ptn
Q-score: 0.375
Said N, Finazzo M, Hilal T, Wang B, Selinger TL, Gjorgjevikj D, Artsimovitch I, Wahl MC
Nat Commun (2024) 15 pp. 3186-3186 [ DOI: doi:10.1038/s41467-024-47439-6 Pubmed: 38622114 ]
- Rho-rof complex (Complex from Escherichia coli)
- Transcription termination factor rho (47 kDa, Protein from Escherichia coli)
- Protein rof (9 kDa, Protein from Escherichia coli)
Structure of Rho pentamer in complex with Rof and ADP
Resolution: 2.7 Å
EM Method: Single-particle
Fitted PDBs: 8pto
Q-score: 0.505
Said N, Finazzo M, Hilal T, Wang B, Selinger TL, Gjorgjevikj D, Artsimovitch I, Wahl MC
Nat Commun (2024) 15 pp. 3186-3186 [ DOI: doi:10.1038/s41467-024-47439-6 Pubmed: 38622114 ]
- Rho-rof complex (Complex from Escherichia coli)
- Adenosine-5'-diphosphate (427 Da, Ligand)
- Transcription termination factor rho (47 kDa, Protein from Escherichia coli)
- Protein rof (9 kDa, Protein from Escherichia coli)
Structure of Rho pentamer in complex with Rof
Resolution: 3.0 Å
EM Method: Single-particle
Fitted PDBs: 8ptp
Q-score: 0.433
Said N, Finazzo M, Hilal T, Wang B, Selinger TL, Gjorgjevikj D, Artsimovitch I, Wahl MC
Nat Commun (2024) 15 pp. 3186-3186 [ DOI: doi:10.1038/s41467-024-47439-6 Pubmed: 38622114 ]
- Rho-rof complex (Complex from Escherichia coli)
- Transcription termination factor rho (47 kDa, Protein from Escherichia coli)
- Protein rof (9 kDa, Protein from Escherichia coli)
Bacterial transcription termination factor Rho + ADP
Resolution: 2.63 Å
EM Method: Single-particle
Fitted PDBs: 8q3n
Q-score: 0.476
Wang B, Said N, Hilal T, Finazzo M, Wahl MC, Artsimovitch I
bioRxiv (2023) [ DOI: doi:10.1101/2023.08.18.553922 Pubmed: 37645988 ]
- Magnesium ion (24 Da, Ligand)
- Adenosine-5'-diphosphate (427 Da, Ligand)
- Transcription termination factor rho (47 kDa, Protein from Escherichia coli)
- Filament of rho mutant g150d (Complex from Escherichia coli)
Bacterial transcription termination factor Rho + pppGpp
Resolution: 3.0 Å
EM Method: Single-particle
Fitted PDBs: 8q3o
Q-score: 0.417
Wang B, Said N, Hilal T, Finazzo M, Wahl MC, Artsimovitch I
bioRxiv (2023) [ DOI: doi:10.1101/2023.08.18.553922 Pubmed: 37645988 ]
- Guanosine 5'-(tetrahydrogen triphosphate) 3'-(trihydrogen diphosphate) (683 Da, Ligand)
- Magnesium ion (24 Da, Ligand)
- Transcription termination factor rho (47 kDa, Protein from Escherichia coli)
- Filament of rho mutant g150d (Complex from Escherichia coli)
Bacterial transcription termination factor Rho G150D mutant
Resolution: 3.5 Å
EM Method: Helical reconstruction
Fitted PDBs: 8q3p
Q-score: 0.45
Wang B, Said N, Hilal T, Finazzo M, Wahl MC, Artsimovitch I
bioRxiv (2023) [ DOI: doi:10.1101/2023.08.18.553922 Pubmed: 37645988 ]
- Magnesium ion (24 Da, Ligand)
- Adenosine-5'-diphosphate (427 Da, Ligand)
- Transcription termination factor rho (48 kDa, Protein from Escherichia)
- Filament of rho mutant g150d (Complex from Escherichia coli)
Bacterial transcription termination factor Rho G152D mutant
Resolution: 3.3 Å
EM Method: Helical reconstruction
Fitted PDBs: 8q3q
Q-score: 0.459
Wang B, Said N, Hilal T, Finazzo M, Wahl MC, Artsimovitch I
bioRxiv (2023) [ DOI: doi:10.1101/2023.08.18.553922 Pubmed: 37645988 ]
- Magnesium ion (24 Da, Ligand)
- Adenosine-5'-diphosphate (427 Da, Ligand)
- Transcription termination factor rho (48 kDa, Protein from Escherichia coli)
- Filament of rho mutant g150d (Complex from Escherichia coli)