Structural basis for VIPP1 oligomerization and maintenance of thylakoid membrane integrity
Resolution: 4.9 Å
EM Method: Single-particle
Fitted PDBs: 7o3w
Q-score: 0.169
Gupta TK, Klumpe S, Gries K, Heinz S, Wietrzynski W, Ohnishi N, Niemeyer J, Spaniol B, Schaffer M, Rast A, Ostermeier M, Strauss M, Plitzko JM, Baumeister W, Rudack T, Sakamoto W, Nickelsen J, Schuller JM, Schroda M, Engel BD
Cell (2021) 184 pp. 3643- [ Pubmed: 34166613 DOI: doi:10.1016/j.cell.2021.05.011 ]
Structural basis for VIPP1 oligomerization and maintenance of thylakoid membrane integrity
Resolution: 3.9 Å
EM Method: Single-particle
Fitted PDBs: 7o3x
Q-score: 0.213
Gupta TK, Klumpe S, Gries K, Heinz S, Wietrzynski W, Ohnishi N, Niemeyer J, Spaniol B, Schaffer M, Rast A, Ostermeier M, Strauss M, Plitzko JM, Baumeister W, Rudack T, Sakamoto W, Nickelsen J, Schuller JM, Schroda M, Engel BD
Cell (2021) 184 pp. 3643- [ Pubmed: 34166613 DOI: doi:10.1016/j.cell.2021.05.011 ]
Structural basis for VIPP1 oligomerization and maintenance of thylakoid membrane integrity
Resolution: 3.8 Å
EM Method: Single-particle
Fitted PDBs: 7o3y
Q-score: 0.208
Gupta TK, Klumpe S, Gries K, Heinz S, Wietrzynski W, Ohnishi N, Niemeyer J, Spaniol B, Schaffer M, Rast A, Ostermeier M, Strauss M, Plitzko JM, Baumeister W, Rudack T, Sakamoto W, Nickelsen J, Schuller JM, Schroda M, Engel BD
Cell (2021) 184 pp. 3643- [ Pubmed: 34166613 DOI: doi:10.1016/j.cell.2021.05.011 ]
Structural basis for VIPP1 oligomerization and maintenance of thylakoid membrane integrity
Resolution: 4.3 Å
EM Method: Single-particle
Fitted PDBs: 7o40
Q-score: 0.186
Gupta TK, Klumpe S, Gries K, Heinz S, Wietrzynski W, Ohnishi N, Niemeyer J, Spaniol B, Schaffer M, Rast A, Ostermeier M, Strauss M, Plitzko JM, Baumeister W, Rudack T, Sakamoto W, Nickelsen J, Schuller JM, Schroda M, Engel BD
Cell (2021) 184 pp. 3643- [ Pubmed: 34166613 DOI: doi:10.1016/j.cell.2021.05.011 ]
Structural basis for VIPP1 oligomerization and maintenance of thylakoid membrane integrity
Resolution: 5.0 Å
EM Method: Single-particle
Fitted PDBs: 7o3z
Q-score: 0.168
Gupta TK, Klumpe S, Gries K, Heinz S, Wietrzynski W, Ohnishi N, Niemeyer J, Spaniol B, Schaffer M, Rast A, Ostermeier M, Strauss M, Plitzko JM, Baumeister W, Rudack T, Sakamoto W, Nickelsen J, Schuller JM, Schroda M, Engel BD
Cell (2021) 184 pp. 3643- [ Pubmed: 34166613 DOI: doi:10.1016/j.cell.2021.05.011 ]
AAA-ATPase ring of PAN-proteasomes
Resolution: 4.85 Å
EM Method: Single-particle
Fitted PDBs: 6he4
Q-score: 0.182
Majumder P, Rudack T, Beck F, Danev R, Pfeifer G, Nagy I, Baumeister W
PNAS (2019) 116 pp. 534-539 [ DOI: doi:10.1073/pnas.1817752116 Pubmed: 30559193 ]
- Adenosine-5'-triphosphate (507 Da, Ligand)
- Pan-proteasome (1 MDa, Complex from Archaeoglobus fulgidus DSM 4304)
- Proteasome-activating nucleotidase (29 kDa, Protein from Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126))
- Adenosine-5'-diphosphate (427 Da, Ligand)
- Magnesium ion (24 Da, Ligand)
Resolution: 6.86 Å
EM Method: Single-particle
Fitted PDBs: 6he8
Q-score: 0.115
Majumder P, Rudack T, Beck F, Danev R, Pfeifer G, Nagy I, Baumeister W
PNAS (2019) 116 pp. 534-539 [ DOI: doi:10.1073/pnas.1817752116 Pubmed: 30559193 ]
- 20s-proteasome (Complex from Archaeoglobus fulgidus DSM 4304)
- Adenosine-5'-triphosphate (507 Da, Ligand)
- Proteasome-activating nucleotidase (pan) (Complex from Archaeoglobus fulgidus DSM 4304)
- Pan-proteasome (1 MDa, Complex from Archaeoglobus fulgidus DSM 4304)
- Proteasome-activating nucleotidase (44 kDa, Protein from Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126))
- Proteasome subunit beta (22 kDa, Protein from Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126))
- Proteasome subunit alpha (27 kDa, Protein from Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126))
- Adenosine-5'-diphosphate (427 Da, Ligand)
- Magnesium ion (24 Da, Ligand)
Resolution: 6.35 Å
EM Method: Single-particle
Fitted PDBs: 6he9
Q-score: 0.123
Majumder P, Rudack T, Beck F, Danev R, Pfeifer G, Nagy I, Baumeister W
PNAS (2019) 116 pp. 534-539 [ DOI: doi:10.1073/pnas.1817752116 Pubmed: 30559193 ]
- 20s-proteasome (Complex from Archaeoglobus fulgidus DSM 4304)
- Adenosine-5'-triphosphate (507 Da, Ligand)
- Proteasome-activating nucleotidase (pan) (Complex from Archaeoglobus fulgidus DSM 4304)
- Pan-proteasome (1 MDa, Complex from Archaeoglobus fulgidus DSM 4304)
- Proteasome-activating nucleotidase (44 kDa, Protein from Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126))
- Proteasome subunit beta (22 kDa, Protein from Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126))
- Proteasome subunit alpha (27 kDa, Protein from Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126))
- Adenosine-5'-diphosphate (427 Da, Ligand)
- Magnesium ion (24 Da, Ligand)
Resolution: 7.04 Å
EM Method: Single-particle
Fitted PDBs: 6hea
Q-score: 0.114
Majumder P, Rudack T, Beck F, Danev R, Pfeifer G, Nagy I, Baumeister W
PNAS (2019) 116 pp. 534-539 [ DOI: doi:10.1073/pnas.1817752116 Pubmed: 30559193 ]
- 20s-proteasome (Complex from Archaeoglobus fulgidus DSM 4304)
- Proteasome subunit alpha (27 kDa, Protein from Archaeoglobus fulgidus DSM 4304)
- Adenosine-5'-triphosphate (507 Da, Ligand)
- Proteasome-activating nucleotidase (pan) (Complex from Archaeoglobus fulgidus DSM 4304)
- Pan-proteasome (1 MDa, Complex from Archaeoglobus fulgidus DSM 4304)
- Proteasome-activating nucleotidase (44 kDa, Protein from Archaeoglobus fulgidus DSM 4304)
- Adenosine-5'-diphosphate (427 Da, Ligand)
- Magnesium ion (24 Da, Ligand)
- Proteasome subunit beta (22 kDa, Protein from Archaeoglobus fulgidus DSM 4304)
Resolution: 6.95 Å
EM Method: Single-particle
Fitted PDBs: 6hec
Q-score: 0.114
Majumder P, Rudack T, Beck F, Danev R, Pfeifer G, Nagy I, Baumeister W
PNAS (2019) 116 pp. 534-539 [ DOI: doi:10.1073/pnas.1817752116 Pubmed: 30559193 ]
- 20s-proteasome (Complex from Archaeoglobus fulgidus DSM 4304)
- Adenosine-5'-triphosphate (507 Da, Ligand)
- Proteasome-activating nucleotidase (pan) (Complex from Archaeoglobus fulgidus DSM 4304)
- Pan-proteasome (1 MDa, Complex from Archaeoglobus fulgidus DSM 4304)
- Proteasome-activating nucleotidase (44 kDa, Protein from Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126))
- Proteasome subunit beta (22 kDa, Protein from Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126))
- Proteasome subunit alpha (27 kDa, Protein from Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126))
- Adenosine-5'-diphosphate (427 Da, Ligand)
- Magnesium ion (24 Da, Ligand)