Electron Microscopy Data Bank

EMD-4790

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In situ subtomogram average of Arp2/3 complex-mediated branch junctions from Dictyostelium discoideum

Release date: July 3, 2019
Resolution: 32.0 Å
EM Method: Subtomogram averaging

Jasnin M, Beck F, Ecke M, Fukuda Y, Martinez-Sanchez A, Baumeister W, Gerisch G

Structure (2019) 27 pp. 1211-1223.e5 [ DOI: doi:10.1016/j.str.2019.05.009 Pubmed: 31230946 ]

Sample:

Actin filament branch junction associated with the arp2/3 complex within the native cellular environment of dictyostelium discoideum (Cellular component from Dictyostelium discoideum AX2)

EMD-4797

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In situ subtomogram average of 80S ribosome from Dictyostelium discoideum

Release date: July 3, 2019
Resolution: 26.0 Å
EM Method: Subtomogram averaging

Jasnin M, Beck F, Ecke M, Fukuda Y, Martinez-Sanchez A, Baumeister W, Gerisch G

Structure (2019) 27 pp. 1211-1223.e5 [ DOI: doi:10.1016/j.str.2019.05.009 Pubmed: 31230946 ]

Sample:

80s ribosome within the native cellular environment of dictyostelium discoideum (Complex from Dictyostelium discoideum AX2)

EMD-8807

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Volta phase plate tomogram of SV + PM vesicle mixture

Release date: Aug. 2, 2017
EM Method: Tomography

Gipson P, Fukuda Y, Danev R, Lai Y, Chen DH, Baumeister W, Brunger AT

PNAS (2017) 114 pp. 9110-9115 [ Pubmed: 28739947 DOI: doi:10.1073/pnas.1708492114 ]

Sample:

Synaptic protein complexes (Complex from Rattus norvegicus)

EMD-8808

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Volta phase plate tomogram of SV(Cpx) + PM vesicle mixture

Release date: Aug. 2, 2017
EM Method: Tomography

Gipson P, Fukuda Y, Danev R, Lai Y, Chen DH, Baumeister W, Brunger AT

PNAS (2017) 114 pp. 9110-9115 [ Pubmed: 28739947 DOI: doi:10.1073/pnas.1708492114 ]

Sample:

Synaptic protein complexes (Complex from Rattus norvegicus)

EMD-8809

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Volta phase plate tomogram of SV(Cpx) + PM(C1C2BMUN) vesicle mixture

Release date: Aug. 2, 2017
EM Method: Tomography

Gipson P, Fukuda Y, Danev R, Lai Y, Chen DH, Baumeister W, Brunger AT

PNAS (2017) 114 pp. 9110-9115 [ Pubmed: 28739947 DOI: doi:10.1073/pnas.1708492114 ]

Sample:

Synaptic protein complexes (Complex from Rattus norvegicus)

EMD-8810

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Volta phase plate tomogram of SV(Cpx) + PM + Ca2+ vesicle mixture

Release date: Aug. 2, 2017
EM Method: Tomography

Gipson P, Fukuda Y, Danev R, Lai Y, Chen DH, Baumeister W, Brunger AT

PNAS (2017) 114 pp. 9110-9115 [ Pubmed: 28739947 DOI: doi:10.1073/pnas.1708492114 ]

Sample:

Synaptic protein complexes (Complex from Rattus norvegicus)

EMD-8811

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Volta phase plate tomogram of SV(Cpx) + PM(C1C2BMUN) + Ca2+ vesicle mixture

Release date: Aug. 2, 2017
EM Method: Tomography

Gipson P, Fukuda Y, Danev R, Lai Y, Chen DH, Baumeister W, Brunger AT

PNAS (2017) 114 pp. 9110-9115 [ Pubmed: 28739947 DOI: doi:10.1073/pnas.1708492114 ]

Sample:

Synaptic protein complexes (Complex from Rattus norvegicus)

EMD-4119

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In situ TPPII 36mer

Release date: April 12, 2017
Resolution: 27.8 Å
EM Method: Subtomogram averaging

Fukuda Y, Beck F, Plitzko JM, Baumeister W

PNAS (2017) 114 pp. 4412-4417 [ DOI: doi:10.1073/pnas.1701367114 Pubmed: 28396430 ]

Sample:

Tripeptidyl peptidase ii (5 MDa, Complex from Rattus)

EMD-4120

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In situ TPPII 32mer

Release date: April 12, 2017
Resolution: 36.5 Å
EM Method: Subtomogram averaging

Fukuda Y, Beck F, Plitzko JM, Baumeister W

PNAS (2017) 114 pp. 4412-4417 [ DOI: doi:10.1073/pnas.1701367114 Pubmed: 28396430 ]

Sample:

Tripeptidyl peptidase ii (4 MDa, Complex from Rattus)

EMD-2830

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Electron cryotomography, subtomogram averaging and classification of 26S proteasomes in situ in intact hippocampal neurons

Release date: Jan. 21, 2015
Resolution: 27.0 Å
EM Method: Subtomogram averaging

Asano S, Fukuda Y, Beck F, Aufderheide A, Foerster F, Danev R, Baumeister W

Science (2015) 347 pp. 439-442 [ DOI: doi:10.1126/science.1261197 Pubmed: 25613890 ]

Sample:

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