EMD-65339

Single-particle
2.84 Å
EMD-65339
3D View Gallery
Deposition: 11/07/2025
Map released: 11/02/2026
Last modified: 11/02/2026
Overview 3D View Sample Experiment Validation Additional data Links
Overview 3D View Sample Experiment Validation Additional data Links

EMD-65339

Archive Files (Depositor)

Primary 3D volume (map.gz) Half-map 1 Half-map 2 (map.gz) Experimental metadata (xml) Experimental metadata (cif.gz)

Validation (wwPDB)

Map-only validation report (pdf.gz) Map-9vtq summary report (pdf.gz) Map-9vtq FULL report (pdf.gz)

EMDB Annotations

EMICSS entry mapping (xml)

EMDB Files

VA raw map (map) VA resolution mask (mrc)

Target DNA-bound type I-F3 TniQ-Cascade of Vibrio parahaemolyticus in full R-loop state 1

EMD-65339

Single-particle
2.84 Å
EMD-65339
3D View Gallery
Deposition: 11/07/2025
Map released: 11/02/2026
Last modified: 11/02/2026
Overview 3D View Sample Experiment Validation Additional data Links
Sample Organism: Vibrio parahaemolyticus RIMD 2210633
Sample: Vibrio parahaemolyticus type I-F3 TniQ-Cascade
Fitted models: 9vtq

Deposition Authors: Ishihara K, Numata T
Sequential structural rearrangements at the PAM-distal site of a type I-F3 CRISPR-Cas effector enabling RNA-guided DNA transposition.
Ishihara K, Matsumoto S, Gerle C , Gopalasingam CC, Shigematsu H, Shirai T, Numata T
(2026) Nucleic Acids Res , 54
PUBMED: 41495894
DOI: doi:10.1093/nar/gkaf1415
ISSN: 1362-4962
ASTM: NARHAD