EMD-62509

Single-particle
3.48 Å
EMD-62509
3D View Gallery
Deposition: 26/11/2024
Map released: 31/12/2025
Last modified: 13/05/2026
Overview 3D View Sample Experiment Validation Additional data Links
Overview 3D View Sample Experiment Validation Additional data Links

EMD-62509

Archive Files (Depositor)

Primary 3D volume (map.gz) Half-map 1 Half-map 2 (map.gz) Experimental metadata (xml) Experimental metadata (cif.gz)

Validation (wwPDB)

Map-only validation report (pdf.gz) Map-9kqo summary report (pdf.gz) Map-9kqo FULL report (pdf.gz)

EMDB Annotations

EMICSS entry mapping (xml)

EMDB Files

VA raw map (map) VA resolution mask (mrc)

cryo-EM structure of RNF20/RNF40-RAD6A-Ub in complex with H2BS112GlcNAc nucleosome

EMD-62509

Single-particle
3.48 Å
EMD-62509
3D View Gallery
Deposition: 26/11/2024
Map released: 31/12/2025
Last modified: 13/05/2026
Overview 3D View Sample Experiment Validation Additional data Links
Sample Organism: Homo sapiens
Sample: RNF20/RNF40-RAD6A-Ub bound to H2BS112GlcNAc nucleosome
Fitted models: 9kqo

Deposition Authors: Deng ZH, Ai HS, Liu L
Allosteric activation of RNF20/RNF40-RAD6A-mediated H2BK120 monoubiquitylation by H2BS112 GlcNAcylation.
Deng Z , Tao S, Du Y, Li Y , Zhang L, Shi Q , Du X, Sun M , Tong Z , Pan M , Liu L , Ai H
(2026) Nat Chem Biol , 22 , 740 - 750
PUBMED: 41495224
DOI: doi:10.1038/s41589-025-02109-6
ISSN: 1552-4469