EMD-37127

Single-particle
3.09 Å
EMD-37127 Deposition: 09/08/2023
Map released: 13/09/2023
Last modified: 02/07/2025
Overview 3D View Sample Experiment Validation Additional data Links
Overview 3D View Sample Experiment Validation Additional data Links

EMD-37127

Archive Files (Depositor)

Primary 3D volume (map.gz) Half-map 1 Half-map 2 (map.gz) Experimental metadata (xml) Experimental metadata (cif.gz)

Validation (wwPDB)

Map-only validation report (pdf.gz) Map-8kd7 summary report (pdf.gz) Map-8kd7 FULL report (pdf.gz)

EMDB Annotations

EMICSS entry mapping (xml)

EMDB Files

VA raw map (map) VA resolution mask (mrc)

Rpd3S in complex with nucleosome with H3K36MLA modification and 167bp DNA

EMD-37127

Single-particle
3.09 Å
EMD-37127 Deposition: 09/08/2023
Map released: 13/09/2023
Last modified: 02/07/2025
Overview 3D View Sample Experiment Validation Additional data Links
Sample Organism: Saccharomyces cerevisiae, Xenopus laevis, synthetic construct
Sample: Alternative deacetylation state of Rpd3S-NCP(167bp/MLA)
Fitted models: 8kd7

Deposition Authors: Dong S, Li H, Wang M, Rasheed N , Zou B, Gao X, Guan J, Li W, Zhang J, Wang C, Zhou N, Shi X, Li M, Zhou M, Huang J, Li H, Zhang Y, Wong KH, Chang X, Chao WCH , He J
Structural basis of nucleosome deacetylation and DNA linker tightening by Rpd3S histone deacetylase complex.
PUBMED: 37666978
DOI: doi:10.1038/s41422-023-00869-1
ISSN: 1001-0602