Electron Microscopy Data Bank

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subtomogram_extraction_software:*MOD

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Current Database

Current status

Sample type

Organism

Rous sarcoma virus [25]
Mus musculus [21]
Rattus norvegicus [14]
Danio rerio [12]
Campylobacter jejuni [10]
Oryctolagus cuniculus [10]
Homo sapiens [9]
Aggregatibacter actinomycetemcomitans [8]
Chlamydomonas reinhardtii [7]
Agricanvirus ray [6]
Human herpesvirus 1 [5]
Measles morbillivirus [4]
Campylobacter jejuni [4]
Caenorhabditis elegans [4]
Rubella virus [3]
Rubella virus [3]
Mycobacterium phage bxb1 [3]
Plasmodium falciparum [3]
Saccharomyces cerevisiae [3]
Anguilla rostrata [3]
(no species) [2]
Flock house virus [2]
Plesiomonas shigelloides [2]
Spraguea lophii [2]
Human respiratory syncytial virus [2]
Varicellovirus suidalpha1 [2]
Escherichia coli [2]
(no species) [2]
Salmonella enterica [2]
Sus scrofa [2]
Equine infectious anemia virus [1]
Enterobacteria phage m13 [1]
Pseudomonas phage 201phi2-1 [1]
Borrelia burgdorferi [1]
Thermus thermophilus [1]
Aliarcobacter butzleri [1]
Pseudomonas phage phikz [1]
Salmonella enterica [1]
Euglena gracilis [1]
Spinacia oleracea [1]
Legionella pneumophila [1]
Escherichia coli [1]
Trypanosoma brucei [1]
Shigella flexneri [1]
Drosophila melanogaster [1]
Wolinella succinogenes [1]

EM Method

Resolution

Model molecular weight

Release Date

Author by name

Baumeister W [33]
Dick RA [26]
Obr M [26]
Schur FKM [26]
Feathers JR [25]
Johnson MC [25]
Klanschnig M [25]
Nikulin N [25]
Ricana CL [25]
Thader A [25]
Vogt VM [25]
Martinez-sanchez A [24]
Chakraborty S [23]
Mahamid J [21]
Beck F [19]
Hwang IY [17]
Noh KM [17]
Toro-nahuelpan M [17]
Chen W [13]
Beeby M [12]
Kikkawa M [12]
Laugks U [12]
Liu J [12]
Morikawa M [12]
Yamaguchi H [12]
Engel BD [10]
Grunewald K [10]
Kudryashev M [10]
Pfeffer S [10]
Vasishtan D [10]
Lara-tejero M [9]
Asavavimol A [8]
Cafferata A [8]
Cameron M [8]
Chiu N [8]
Corbett K [8]
Davydov D [8]
Desai I [8]
Diaz G [8]
Dutton R [8]
Grange M [8]
Grose JH [8]
Guereca M [8]
Gulbronson CJ [8]
Hearst K [8]
Henderson LD [8]
Hendrixson DR [8]
Huang L [8]
Jacobs E [8]
Johnson A [8]
Kahn S [8]
Koch R [8]
Laughlin TG [8]
Lee A [8]
Lee J [8]
Martinez A [8]
Matthews-palmer TRS [8]
Meyer J [8]
Mintz KP [8]
Norquist M [8]
Pau T [8]
Plitzko JM [8]
Pogliano J [8]
Pogliano K [8]
Prasad G [8]
Prazak V [8]
Prichard A [8]
Radermacher M [8]
Ribardo DA [8]
Ruiz T [8]
Saam K [8]
Sandhu M [8]
Sarabia AJ [8]
Schaffer M [8]
Schumaker S [8]
Sonin A [8]
Spencer T [8]
Sy A [8]
Tang-siegel GG [8]
Thomas KP [8]
Uyeno A [8]
Villa E [8]
Zhao A [8]
Klupp BG [7]
Liu Y [7]
Mettenleiter TC [7]
Zhu S [7]
Baker MAB [6]
Bosse JB [6]
Botting JM [6]
Chen Y [6]
Chen Z [6]
Feng X [6]
Gao B [6]
Gao X [6]
Guichard P [6]
Guo Q [6]
Hagen C [6]
Hamel V [6]
He J [6]

Author by ORCID

Klanschnig M [25]
Ricana CL [25]
Nikulin N [25]
Schur FKM [25]
Baumeister W [23]
Chakraborty S [23]
Mahamid J [21]
Toro-nahuelpan M [17]
Beeby M [12]
Kikkawa M [12]
Yamaguchi H [12]
Morikawa M [12]
Engel BD [10]
Grunewald K [10]
Kudryashev M [10]
Prazak V [8]
Hendrixson DR [8]
Schaffer M [8]
Radermacher M [8]
Tang-siegel GG [8]
Gulbronson CJ [8]
Ruiz T [8]
Mintz KP [8]
Plitzko JM [8]
Henderson LD [8]
Matthews-palmer TRS [8]
Grange M [8]
Martinez-sanchez A [7]
Liu J [7]
Hamel V [6]
Heumann JM [6]
Sanders S [6]
Bosse JB [6]
Guichard P [6]
Hagen C [6]
Jensen Y [6]
Wan W [6]
Lucic V [6]
Laugks U [6]
Jordan MA [5]
Gao X [5]
Lara-tejero M [5]
Pigino G [5]
Gao B [5]
Baker MAB [5]
Chang YW [5]
Botting JM [5]
Pfeffer S [4]
Geimer S [4]
Erdmann PS [4]
Nicastro D [4]
Kuhlbrandt W [4]
Klose T [4]
Klena N [4]
Daum B [4]
Mangala Prasad V [4]
Ke Z [4]
Rossmann MG [4]
Righetto RD [4]
Van Den Hoek H [4]
Leon F [4]
Yang JH [4]
Zhang Y [3]
Cova MM [3]
Guerin A [3]
Sun F [3]
Chen WD [3]
Mageswaran SK [3]
Freeman KG [3]
Molnar P [3]
Mondal S [3]
Ho MC [3]
Conway JF [3]
Schrad JR [3]
Zhang D [3]
Kawamoto A [3]
Martinez M [3]
Pissaridou P [3]
Zhang X [2]
Isupov MN [2]
Carter AP [2]
Connell SR [2]
Chung JJ [2]
Chesnokov YM [2]
Unchwaniwala N [2]
Bracher A [2]
Bi GQ [2]
Lau PM [2]
Rossmann FM [2]
Bohn S [2]
Dewar CE [2]
Kim HJ [2]
Genoud C [2]
Sun R [2]
Sanchez JC [2]
Muhleip AW [2]
Murakami K [2]
Gambelli L [2]
Yang JE [2]
Davies KM [2]

Journal

Software

Microscope

Electron Source

Film or detector model

External links

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Showing 1 - 10 of 191. Page 1 of 20

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EMD-76383

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3D View

Subtomogram average structure of flagellar export apparatus and MS-ring in Borrelia burgdorferi

CryoEM

Release date: Aug. 26, 2026
Resolution: 16.0 Å
EM Method: Subtomogram averaging
Fitted PDBs: 12eq

Q-score: 0.041
Similar entry percentile: 34%

Yue J, Liu J

To Be Published

EMD-68843

Download Map

3D View

Subtomogram averaged mouse UOX assembly map

CryoEM

Release date: July 8, 2026
Resolution: 8.0 Å
EM Method: Subtomogram averaging

Yang JH

To Be Published

EMD-68844

Download Map

3D View

Subtomogram averaged mouse UOX assembly map with helical symmetry applied

CryoEM

Release date: July 8, 2026
Resolution: 6.9 Å
EM Method: Subtomogram averaging

Yang JH

To Be Published

EMD-68846

Download Map

3D View

Subtomogram averaged porcine UOX assembly map with helical symmetry applied

CryoEM

Release date: July 8, 2026
Resolution: 6.1 Å
EM Method: Subtomogram averaging

Yang JH

To Be Published

EMD-68847

Download Map

3D View

Subtomogram averaged rat UOX assembly map

CryoEM

Release date: July 8, 2026
Resolution: 10.0 Å
EM Method: Subtomogram averaging

Yang JH

To Be Published

EMD-81573

Download Map

3D View

Subtomogram averaged porcine UOX assembly map

CryoEM

Release date: July 8, 2026
Resolution: 7.3 Å
EM Method: Subtomogram averaging

Yang JH

To Be Published

EMD-81808

Download Map

3D View

Subtomogram averaged rat UOX assembly map with helical symmetry applied

CryoEM

Release date: July 8, 2026
Resolution: 8.4 Å
EM Method: Subtomogram averaging

Yang JH

To Be Published

EMD-54985

Download Map

3D View

Subtomogram average of nucleosomes extracted from vitreous sections of Drosophila melanogaster embryos

CryoEM

Release date: March 4, 2026
Resolution: 20.0 Å
EM Method: Subtomogram averaging

Fatmaoui F, Carrivain P, Taiki F, Iusupova A, Grewe D, Hagen W, Jakob B, Victor JM, Leforestier A, Eltsov M

EMBO J (2026) 45 pp. 1621-1647 [ Pubmed: 41663843 DOI: doi:10.1038/s44318-026-00701-7 ]

EMD-73072

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Half of Campylobacter jejuni fcpMNO deletion mutant flagellar motor structure in situ

CryoEM

Release date: Dec. 17, 2025
Resolution: 32.1 Å
EM Method: Subtomogram averaging

Feng X, Tachiyama S, He J, Zhu S, Zhao H, Botting JM, Liu Y, Chen Y, Hua C, Lara-Tejero M, Baker MAB, Gao X, Liu J, Gao B

Nat Microbiol (2026) 11 pp. 770-785 [ DOI: doi:10.1038/s41564-025-02248-5 Pubmed: 41513997 ]

EMD-73073

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3D View

Half of Campylobacter jejuni pflD deletion mutant flagellar motor structure in situ

CryoEM

Release date: Dec. 17, 2025
Resolution: 30.5 Å
EM Method: Subtomogram averaging

Feng X, Tachiyama S, He J, Zhu S, Zhao H, Botting JM, Liu Y, Chen Y, Hua C, Lara-Tejero M, Baker MAB, Gao X, Liu J, Gao B

Nat Microbiol (2026) 11 pp. 770-785 [ DOI: doi:10.1038/s41564-025-02248-5 Pubmed: 41513997 ]

Sort by: Download

Showing 1 - 10 of 191. Page 1 of 20

Display:

Statistics

Filter By

Current Database

Current status

Sample type

Organism

Rous sarcoma virus [25]
Mus musculus [21]
Rattus norvegicus [14]
Danio rerio [12]
Campylobacter jejuni [10]
Oryctolagus cuniculus [10]
Homo sapiens [9]
Aggregatibacter actinomycetemcomitans [8]
Chlamydomonas reinhardtii [7]
Agricanvirus ray [6]
Human herpesvirus 1 [5]
Measles morbillivirus [4]
Campylobacter jejuni [4]
Caenorhabditis elegans [4]
Rubella virus [3]
Rubella virus [3]
Mycobacterium phage bxb1 [3]
Plasmodium falciparum [3]
Saccharomyces cerevisiae [3]
Anguilla rostrata [3]
(no species) [2]
Flock house virus [2]
Plesiomonas shigelloides [2]
Spraguea lophii [2]
Human respiratory syncytial virus [2]
Varicellovirus suidalpha1 [2]
Escherichia coli [2]
(no species) [2]
Salmonella enterica [2]
Sus scrofa [2]
Equine infectious anemia virus [1]
Enterobacteria phage m13 [1]
Pseudomonas phage 201phi2-1 [1]
Borrelia burgdorferi [1]
Thermus thermophilus [1]
Aliarcobacter butzleri [1]
Pseudomonas phage phikz [1]
Salmonella enterica [1]
Euglena gracilis [1]
Spinacia oleracea [1]
Legionella pneumophila [1]
Escherichia coli [1]
Trypanosoma brucei [1]
Shigella flexneri [1]
Drosophila melanogaster [1]
Wolinella succinogenes [1]

EM Method

Resolution

Model molecular weight

Release Date

Author by name

Baumeister W [33]
Dick RA [26]
Obr M [26]
Schur FKM [26]
Feathers JR [25]
Johnson MC [25]
Klanschnig M [25]
Nikulin N [25]
Ricana CL [25]
Thader A [25]
Vogt VM [25]
Martinez-sanchez A [24]
Chakraborty S [23]
Mahamid J [21]
Beck F [19]
Hwang IY [17]
Noh KM [17]
Toro-nahuelpan M [17]
Chen W [13]
Beeby M [12]
Kikkawa M [12]
Laugks U [12]
Liu J [12]
Morikawa M [12]
Yamaguchi H [12]
Engel BD [10]
Grunewald K [10]
Kudryashev M [10]
Pfeffer S [10]
Vasishtan D [10]
Lara-tejero M [9]
Asavavimol A [8]
Cafferata A [8]
Cameron M [8]
Chiu N [8]
Corbett K [8]
Davydov D [8]
Desai I [8]
Diaz G [8]
Dutton R [8]
Grange M [8]
Grose JH [8]
Guereca M [8]
Gulbronson CJ [8]
Hearst K [8]
Henderson LD [8]
Hendrixson DR [8]
Huang L [8]
Jacobs E [8]
Johnson A [8]
Kahn S [8]
Koch R [8]
Laughlin TG [8]
Lee A [8]
Lee J [8]
Martinez A [8]
Matthews-palmer TRS [8]
Meyer J [8]
Mintz KP [8]
Norquist M [8]
Pau T [8]
Plitzko JM [8]
Pogliano J [8]
Pogliano K [8]
Prasad G [8]
Prazak V [8]
Prichard A [8]
Radermacher M [8]
Ribardo DA [8]
Ruiz T [8]
Saam K [8]
Sandhu M [8]
Sarabia AJ [8]
Schaffer M [8]
Schumaker S [8]
Sonin A [8]
Spencer T [8]
Sy A [8]
Tang-siegel GG [8]
Thomas KP [8]
Uyeno A [8]
Villa E [8]
Zhao A [8]
Klupp BG [7]
Liu Y [7]
Mettenleiter TC [7]
Zhu S [7]
Baker MAB [6]
Bosse JB [6]
Botting JM [6]
Chen Y [6]
Chen Z [6]
Feng X [6]
Gao B [6]
Gao X [6]
Guichard P [6]
Guo Q [6]
Hagen C [6]
Hamel V [6]
He J [6]

Author by ORCID

Klanschnig M [25]
Ricana CL [25]
Nikulin N [25]
Schur FKM [25]
Baumeister W [23]
Chakraborty S [23]
Mahamid J [21]
Toro-nahuelpan M [17]
Beeby M [12]
Kikkawa M [12]
Yamaguchi H [12]
Morikawa M [12]
Engel BD [10]
Grunewald K [10]
Kudryashev M [10]
Prazak V [8]
Hendrixson DR [8]
Schaffer M [8]
Radermacher M [8]
Tang-siegel GG [8]
Gulbronson CJ [8]
Ruiz T [8]
Mintz KP [8]
Plitzko JM [8]
Henderson LD [8]
Matthews-palmer TRS [8]
Grange M [8]
Martinez-sanchez A [7]
Liu J [7]
Hamel V [6]
Heumann JM [6]
Sanders S [6]
Bosse JB [6]
Guichard P [6]
Hagen C [6]
Jensen Y [6]
Wan W [6]
Lucic V [6]
Laugks U [6]
Jordan MA [5]
Gao X [5]
Lara-tejero M [5]
Pigino G [5]
Gao B [5]
Baker MAB [5]
Chang YW [5]
Botting JM [5]
Pfeffer S [4]
Geimer S [4]
Erdmann PS [4]
Nicastro D [4]
Kuhlbrandt W [4]
Klose T [4]
Klena N [4]
Daum B [4]
Mangala Prasad V [4]
Ke Z [4]
Rossmann MG [4]
Righetto RD [4]
Van Den Hoek H [4]
Leon F [4]
Yang JH [4]
Zhang Y [3]
Cova MM [3]
Guerin A [3]
Sun F [3]
Chen WD [3]
Mageswaran SK [3]
Freeman KG [3]
Molnar P [3]
Mondal S [3]
Ho MC [3]
Conway JF [3]
Schrad JR [3]
Zhang D [3]
Kawamoto A [3]
Martinez M [3]
Pissaridou P [3]
Zhang X [2]
Isupov MN [2]
Carter AP [2]
Connell SR [2]
Chung JJ [2]
Chesnokov YM [2]
Unchwaniwala N [2]
Bracher A [2]
Bi GQ [2]
Lau PM [2]
Rossmann FM [2]
Bohn S [2]
Dewar CE [2]
Kim HJ [2]
Genoud C [2]
Sun R [2]
Sanchez JC [2]
Muhleip AW [2]
Murakami K [2]
Gambelli L [2]
Yang JE [2]
Davies KM [2]

Journal

Software

Microscope

Electron Source

Film or detector model

External links