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software_ft:cryoSPARC
Filter By
Current Database
- EMDB [12944]
Current status
- REL [12944]
Sample type
- Complex [12001]
- Protein [9584]
- Ligand [5663]
- RNA [1029]
- DNA [945]
- Cellular component [570]
- Virus [316]
- Cell [89]
- Other [53]
- Tissue [26]
Organism
- Homo sapiens [5278]
- Synthetic construct [879]
- Mus musculus [875]
- Escherichia coli [814]
- Severe acute respiratory syndrome coronavirus [808]
- Saccharomyces cerevisiae [451]
- Escherichia coli [343]
- Human immunodeficiency virus 1 [301]
- Rattus norvegicus [274]
- Bos taurus [232]
- Oryctolagus cuniculus [232]
- Lama glama [209]
- Sus scrofa [192]
- Xenopus laevis [167]
- Arabidopsis thaliana [130]
- Saccharomyces cerevisiae [122]
- Influenza a virus [111]
- Mycobacterium tuberculosis [106]
- Mycolicibacterium smegmatis [82]
- Macaca mulatta [82]
- Bacillus sp. (strain ps3) [80]
- Trypanosoma brucei [66]
- Vicugna pacos [64]
- Escherichia coli [61]
- Staphylococcus aureus [60]
- Bacillus subtilis [59]
- Thermus thermophilus [58]
- Plasmodium falciparum [52]
- Aequorea victoria [50]
- Drosophila melanogaster [50]
- Human herpesvirus 1 [47]
- Mycobacterium tuberculosis [47]
- Chlamydomonas reinhardtii [45]
- Lassa mammarenavirus [42]
- Trichomonas vaginalis [42]
- Gallus gallus [42]
- Pseudomonas aeruginosa [40]
- Chaetomium thermophilum [38]
- Potato virus y [37]
- Enterobacteria phage t4 [37]
- Enterobacteria phage t4 [36]
- Meiothermus taiwanensis [35]
- Schizosaccharomyces pombe [35]
- Simian virus 40 [32]
- Macaca fascicularis [32]
- Pseudomonas aeruginosa [31]
- Clostridium perfringens [30]
- Caenorhabditis elegans [30]
- Cricetulus griseus [29]
- Acetivibrio thermocellus [29]
- Thermotoga maritima [29]
- Saccharomyces cerevisiae [29]
- Salmonella enterica [29]
- Chaetomium thermophilum [28]
- Euglena gracilis [28]
- Salmonella enterica [27]
- Mycolicibacterium smegmatis [26]
- Dna molecule [26]
- Caulobacter vibrioides [26]
- Tetrahymena thermophila [26]
- Danio rerio [26]
- Ovis aries [26]
- Influenza a virus [25]
- Streptococcus pyogenes [24]
- Listeria innocua [24]
- Brassica oleracea [23]
- Tilapinevirus tilapiae [22]
- Adeno-associated dependoparvovirus a [21]
- Severe acute respiratory syndrome coronavirus [21]
- Synechocystis sp. pcc 6803 [19]
- Potyvirus atuberosi [19]
- Streptococcus thermophilus [19]
- Porcine epidemic diarrhea virus [19]
- Plasmodium falciparum [19]
- Lake sinai virus 2 [18]
- Geobacillus stearothermophilus [18]
- Clostridium botulinum [18]
- Clostridioides difficile [18]
- Escherichia coli [18]
- Methanosarcina acetivorans [18]
- Azotobacter vinelandii [18]
- Vibrio cholerae [18]
- Acinetobacter baumannii [18]
- Escherichia coli [18]
- Human coronavirus 229e [17]
- Camelidae mixed library [17]
- Aquifex aeolicus [17]
- Vibrio cholerae [17]
- Equus caballus [17]
- Human herpesvirus 1 [16]
- Epstein-barr virus (strain gd1) [16]
- Synechocystis sp. pcc 6803 [16]
- Carboxydothermus hydrogenoformans [16]
- Middle east respiratory syndrome-related coronavirus [16]
- Vigna radiata [16]
- Helicobacter pylori [16]
- Bacillus subtilis [16]
- Thermotoga maritima [16]
- Saccharolobus solfataricus [16]
- Escherichia phage ms2 [16]
EM Method
- Single-particle [12681]
- Helical reconstruction [262]
- Subtomogram averaging [1]
Resolution
- < 2Å [121]
- ≥ 2Å and < 3Å [3625]
- ≥ 3Å and < 4Å [6373]
- ≥ 4Å and < 5Å [1364]
- ≥ 5Å and < 6Å [355]
- ≥ 6Å and < 8Å [567]
- ≥ 8Å and < 12Å [287]
- ≥ 12Å and < 16Å [75]
- ≥ 16Å and < 20Å [90]
- ≥ 20Å and < 30Å [84]
- ≥ 30Å [3]
Model molecular weight
- 0-50 kDa [4]
- 50-100 kDa [24]
- 100-250 kDa [97]
- 250-500 kDa [92]
- 500-1000 kDa [51]
- 1-2 MDa [12]
- 2-5 MDa [10]
- 5-10 MDa [3]
- > 10 MDa [2]
Release Date
- 2026 [1077]
- 2025 [4097]
- 2024 [2771]
- 2023 [2049]
- 2022 [1219]
- 2021 [870]
- 2020 [554]
- 2019 [190]
- 2018 [95]
- 2017 [22]
Author by name
- Liu Y [366]
- Zhang Y [361]
- Ward AB [289]
- Gao Y [266]
- Zhang K [254]
- Zhang L [237]
- Wang J [233]
- Wang Y [227]
- Zhang S [214]
- Zhang Z [212]
- Lyumkis D [200]
- Rubinstein JL [200]
- Skiniotis G [195]
- Marks AR [189]
- Zhang X [189]
- Li S [188]
- Miotto MC [186]
- Papasergi-scott MM [184]
- Sheng K [180]
- Williamson JR [180]
- Kwong PD [178]
- Yang Y [173]
- Wang H [172]
- Panova O [169]
- Kobilka BK [168]
- Wang S [168]
- Gmeiner P [166]
- Li Y [166]
- Seven AB [165]
- Kishikawa J [161]
- Zhou ZH [161]
- Dridi H [160]
- Hilger D [160]
- Reiken S [160]
- He F [159]
- Hildebrand PW [159]
- Tchagou C [159]
- Weninger G [159]
- Hu Y [158]
- Batebi H [157]
- Casiraghi M [157]
- Eskici G [157]
- Maul L [157]
- Perez-hernandez G [157]
- Liu J [156]
- Yuan Q [154]
- Dong X [153]
- Zhang B [147]
- Kishikawa JI [144]
- Zhou J [141]
- Wang L [139]
- Wronska A [137]
- Li H [136]
- Vanden Broeck A [134]
- Wu M [134]
- Veesler D [130]
- Zhou L [130]
- Mitsuoka K [125]
- Chen Y [124]
- Klinge S [124]
- Lee J [121]
- Park J [120]
- Zhang R [120]
- Yokoyama K [119]
- Yu J [119]
- Wang X [117]
- Shapiro L [116]
- Li Z [112]
- Nakano A [112]
- Zhang J [112]
- Baker D [111]
- Zhao Y [111]
- He Z [110]
- Acharya P [109]
- Hu YQ [108]
- Han F [107]
- Ozorowski G [106]
- Bjorkman PJ [105]
- Liu S [105]
- Tian H [105]
- Aiyer S [104]
- Spahn CMT [104]
- Chai P [103]
- Kato T [103]
- Hsu STD [102]
- Park YJ [102]
- Zhou T [102]
- Hite RK [101]
- Liu Z [101]
- Gati C [100]
- Wang Q [100]
- Jiang Y [99]
- Liu B [99]
- Torres JL [99]
- Chen X [98]
- Chen Z [98]
- Guo H [97]
- He ZX [97]
- Clarke OB [96]
- Borgnia MJ [95]
Author by ORCID
- Rubinstein JL [8]
- Skiniotis G [7]
- Li H [6]
- Kwong PD [6]
- Hilger D [5]
- Czarnocki-cieciura M [5]
- Kobilka BK [5]
- Ward AB [5]
- Skowronek K [5]
- Batebi H [5]
- Gmeiner P [5]
- Panova O [5]
- He F [5]
- Gao Y [5]
- Perez-hernandez G [5]
- Hildebrand PW [5]
- Papasergi-scott MM [5]
- Guo H [4]
- Noble AJ [4]
- Stahlberg H [4]
- Zhou T [4]
- Chiu W [4]
- Clarke OB [4]
- Podobnik M [3]
- Southworth DR [3]
- Zhang K [3]
- Nowotny M [3]
- Yang J [3]
- Chai P [3]
- Kim K [3]
- Deville C [3]
- Chang YC [3]
- Kollman JM [3]
- Mer G [3]
- Tse E [3]
- Pardon E [3]
- Spahn CMT [3]
- Markus SM [3]
- Steyaert J [3]
- Arragain B [3]
- Botuyan MV [3]
- Li S [3]
- Zhou D [3]
- Wang Y [3]
- Cali T [3]
- Cusack S [3]
- Zhang K [3]
- Wysocki VH [3]
- Bukau B [3]
- Yang TJ [3]
- Johnston JD [3]
- Lauer SM [3]
- Edwards RJ [3]
- Vallese F [3]
- Nikolay R [3]
- Blaza JN [2]
- Schneider C [2]
- Sampson JM [2]
- Bell CE [2]
- Burton DR [2]
- Brohawn SG [2]
- Ekemezie CL [2]
- Huang KA [2]
- Hill CH [2]
- Prumbaum D [2]
- Hsia Y [2]
- Das R [2]
- Robinson CV [2]
- Bochtler M [2]
- Baker D [2]
- Yin P [2]
- Tan TK [2]
- Williams DR [2]
- Doudna JA [2]
- Hardwick SW [2]
- Raunser S [2]
- Zajko W [2]
- Hoffmann R [2]
- Chirgadze DY [2]
- Doyle LA [2]
- Rybak MY [2]
- Fung HYJ [2]
- Roth BL [2]
- Rebowski G [2]
- Brown CR [2]
- Crispin M [2]
- Braxton JR [2]
- Yang EC [2]
- Changrob S [2]
- Lanphere C [2]
- Bieniasz PD [2]
- James W [2]
- Merzel F [2]
- Lux MC [2]
- Slyvka A [2]
- Ni D [2]
- Roumeliotis TI [2]
- Cottrell CA [2]
- Wilson PC [2]
- Gorman J [2]
Journal
- NAT COMMUN [2795]
- TO BE PUBLISHED [1655]
- NATURE [1224]
- BIORXIV [847]
- NAT STRUCT MOL BIOL [784]
- SCIENCE [622]
- PNAS [531]
- SCI ADV [519]
- MOL CELL [430]
- CELL REP [295]
- CELL [292]
- NUCLEIC ACIDS RES [287]
- STRUCTURE [278]
- ELIFE [263]
- COMMUN BIOL [169]
- NAT CHEM BIOL [136]
- EMBO J [125]
- J BIOL CHEM [112]
- ACTA CRYSTALLOGR D STRUCT BIOL [95]
- PROTEIN SCI [91]
- CELL RES [74]
- J VIROL [68]
- PLOS PATHOG [67]
- NAT MICROBIOL [65]
- IMMUNITY [64]
- CELL HOST MICROBE [60]
- J MOL BIOL [60]
- NAT METHODS [58]
- J STRUCT BIOL [57]
- MBIO [55]
- J CLIN INV [49]
- NAT PLANTS [41]
- J AM CHEM SOC [39]
- SCI REP [39]
- J STRUCT BIOL X [37]
- PNAS NEXUS [37]
- SCI TRANSL MED [37]
- CELL DISCOV [34]
- COMMUN CHEM [34]
- EBIOMEDICINE [34]
- INT J MOL SCI [33]
- PLOS BIOL [33]
- NEURON [32]
- ISCIENCE [31]
- RES SQ [31]
- J MED CHEM [27]
- BLOOD [26]
- NPJ VACCINES [26]
- EMBO REP [22]
- J CELL BIOL [22]
- BIOCHEMISTRY [21]
- NAT NANOTECHNOL [20]
- ADV SCI [18]
- ACS NANO [17]
- NAT CATAL [17]
- COMMUN MATER [16]
- IUCRJ [16]
- FUNDAM RES [15]
- GENES DEV [14]
- J GEN VIROL [14]
- LIFE SCI ALLIANCE [14]
- VIRUSES [14]
- PLOS ONE [13]
- SCI IMMUNOL [13]
- BIOMOLECULES [12]
- FEBS LETT [12]
- NAT IMMUNOL [12]
- ACS CATAL [11]
- BIOCHEM BIOPHYS RES COMMUN [11]
- ACTA CRYSTALLOGR F STRUCT BIOL COMMUN [10]
- CELL REP MED [10]
- CURR BIOL [10]
- PROTEIN CELL [10]
- INT J BIOL MACROMOL [9]
- J EXP MED [9]
- RES COMPUT MOL BIOL [9]
- VIROLOGY [9]
- FEBS J [8]
- J.THROMB.HAEMOST. [8]
- PLANT CELL [8]
- RNA [8]
- SIGNAL TRANSDUCT TARGET THER [8]
- ACTA PHARMACOL.SIN. [7]
- BIOPHYS J [7]
- BMC METHODS [7]
- ENVIRON SCI TECHNOL. [7]
- MOL.BIOL.EVOL. [7]
- PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES USA [7]
- SMALL [7]
- FASEB J [6]
- FRONT MOL BIOSCI [6]
- MACROMOL RAPID COMMUN [6]
- NAT BIOMED ENG [6]
- NAT BIOTECHNOL [6]
- NAT MED [6]
- NAT METAB [6]
- ACS CENT SCI [5]
- BIOCHIM BIOPHYS ACTA BIOENERG [5]
- BIOMACROMOLECULES [5]
- CURR RES STRUCT BIOL [5]
Software
- CRYOSPARC [12944]
- RELION [1982]
- CTFFIND [590]
- GCTF [213]
- COOT [186]
- WARP [103]
- CISTEM [84]
- UCSF CHIMERAX [70]
- PHENIX [57]
- UCSF CHIMERA [44]
- ISOLDE [19]
- EMAN [16]
- CRYODRGN [14]
- SIMPLE [14]
- CRYOLO [13]
- FREALIGN [9]
- SCIPION [6]
- EMAN2 [5]
- EMREADY [5]
- JSPR [5]
- MOTIONCORR2 [4]
- EPU [2]
- SERIALEM [2]
- XMIPP [2]
- BSOFT [1]
- CRYOS [1]
- CRYOSPAR [1]
- IHRSR [1]
- MDFF [1]
- MPSA [1]
- RELION2.1 [1]
- ROSETTA [1]
- SPRING [1]
- TOPAZ [1]
Microscope
- FEI TITAN KRIOS [6374]
- TFS KRIOS [4140]
- FEI TALOS ARCTICA [829]
- TFS GLACIOS [730]
- JEOL CRYO ARM 300 [188]
- FEI TITAN [97]
- FEI TECNAI F30 [86]
- TFS TALOS [82]
- FEI POLARA 300 [76]
- TFS TALOS L120C [70]
- FEI TECNAI ARCTICA [58]
- FEI TECNAI F20 [49]
- FEI TECNAI SPIRIT [43]
- JEOL CRYO ARM 200 [29]
- TFS TITAN THEMIS [20]
- FEI TECNAI 20 [18]
- FEI TECNAI 12 [13]
- FEI/PHILIPS CM300FEG/T [10]
- JEOL 3200FSC [8]
- TFS TALOS F200C [7]
- FEI MORGAGNI [5]
- FEI TECNAI 10 [4]
- JEOL 2100F [3]
- JEOL 3200FS [3]
- JEOL 2100 [2]
- FEI TECNAI SPHERA [1]
- FEI/PHILIPS CM300FEG/HE [1]
- JEOL 1230 [1]
- JEOL 1400 [1]
- JEOL 2010 [1]
- JEOL 2010F [1]
- TFS TUNDRA [1]
Electron Source
- FIELD EMISSION GUN [12801]
- LAB6 [128]
- OTHER [15]
Film or detector model
- GATAN K3 6K X 4K [4165]
- GATAN K3 BIOQUANTUM 6K X 4K [3635]
- FEI FALCON IV 4K X 4K [1697]
- GATAN K2 SUMMIT 4K X 4K [1667]
- FEI FALCON III 4K X 4K [670]
- TFS FALCON 4I 4K X 4K [488]
- GATAN K2 QUANTUM 4K X 4K [186]
- GATAN K3 BIOCONTINUUM 6K X 4K [168]
- FEI CETA 4K X 4K [80]
- GATAN ULTRASCAN 4000 4K X 4K [46]
- FEI FALCON II 4K X 4K [43]
- TVIPS TEMCAM-F416 4K X 4K [32]
- OTHER [27]
- DIRECT ELECTRON APOLLO 4K X 4K [13]
- GATAN K2 BASE 4K X 4K [9]
- FEI FALCON I 4K X 4K [8]
- DIRECT ELECTRON DE-10 5K X 4K [7]
- FEI EAGLE 4K X 4K [5]
- DIRECT ELECTRON DE-20 5K X 3K [4]
- DIRECT ELECTRON DE-64 8K X 8K [3]
- DECTRIS ELA 1K X 0.5K [2]
- DIRECT ELECTRON DE-16 4K X 4K [2]
- GATAN ALPINE 2.3K X 3.2K [2]
- TVIPS TEMCAM-F816 8K X 8K [2]
- DECTRIS SINGLA 1K X 1K [1]
- GATAN K2 IS 4K X 4K [1]
- GATAN MULTISCAN [1]
- GATAN ORIUS SC200 2K X 2K [1]
- GATAN ULTRASCAN 1000 2K X 2K [1]
External links
- PDB [297]
- UniProt [279]
- PDBe-Kb [250]
- AlphaFold DB [239]
- InterPro [227]
- Gene Ontology [210]
- Pfam [210]
- ChEBI [176]
- ChEMBL [156]
- DrugBank [139]
- Complex Portal [81]
- EMPIAR [35]
- SCOP2 [4]
Release date: March 4, 2026
Resolution: 2.84 Å
EM Method: Single-particle
Fitted PDBs: 8v9t
Q-score: 0.385
Resolution: 2.84 Å
EM Method: Single-particle
Fitted PDBs: 8v9t
Q-score: 0.385
Shatarupa A, Brown D, Olinares PDB, Chase J, Isiorho E, Chait BT, Jeruzalmi D
Nucleic Acids Res (2025) 53 [ Pubmed: 41312769 DOI: doi:10.1093/nar/gkaf1139 ]
Release date: March 4, 2026
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 9dhx
Q-score: 0.555
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 9dhx
Q-score: 0.555
Sarkar S, Gebert LFR, MacRae IJ
To Be Published
Release date: March 4, 2026
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 9nej
Q-score: 0.509
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 9nej
Q-score: 0.509
Khandelwal NK, Gupta M, Stroud RM
To Be Published
Release date: March 4, 2026
Resolution: 2.1 Å
EM Method: Single-particle
Resolution: 2.1 Å
EM Method: Single-particle
Evans JE, Powell SM
To Be Published
Release date: March 4, 2026
Resolution: 2.8 Å
EM Method: Single-particle
Resolution: 2.8 Å
EM Method: Single-particle
Evans JE, Powell SM
To Be Published
Release date: March 4, 2026
Resolution: 2.16 Å
EM Method: Single-particle
Fitted PDBs: 9ian
Q-score: 0.635
Resolution: 2.16 Å
EM Method: Single-particle
Fitted PDBs: 9ian
Q-score: 0.635
Schneider FF, Martin del Campo JS, Zhang L, Dean DR, Einsle O
To Be Published
Release date: March 4, 2026
Resolution: 2.14 Å
EM Method: Single-particle
Fitted PDBs: 9iao
Q-score: 0.669
Resolution: 2.14 Å
EM Method: Single-particle
Fitted PDBs: 9iao
Q-score: 0.669
Schneider FF, Martin del Campo JS, Zhang L, Dean DR, Einsle O
To Be Published
Release date: March 4, 2026
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 9iar
Q-score: 0.521
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 9iar
Q-score: 0.521
Kuhn BT, Geertsma ER, Kovermann P, Bungert-Plumke S, Fahlke C, Haddad BG, Machtens J-P, Rasmussen T, Bottcher B
To Be Published
Release date: March 4, 2026
Resolution: 2.8 Å
EM Method: Single-particle
Fitted PDBs: 9ias
Q-score: 0.518
Resolution: 2.8 Å
EM Method: Single-particle
Fitted PDBs: 9ias
Q-score: 0.518
Kuhn BT, Geertsma ER, Kovermann P, Bungert-Plumke S, Fahlke C, Haddad BG, Machtens J-P, Rasmussen T, Bottcher B
To Be Published
Release date: March 4, 2026
Resolution: 2.9 Å
EM Method: Single-particle
Fitted PDBs: 9ib0
Q-score: 0.474
Resolution: 2.9 Å
EM Method: Single-particle
Fitted PDBs: 9ib0
Q-score: 0.474
Blascitz K, Schulte T, Nyesiga B, Samojlovic M, Godzwon M, Walle M, Israelsson L, Wallden K, Roos A, Esbjornsson J, von Schantz L, Andrell J, Woestenenk E, Ohlin M
To Be Published
Filter By
Current Database
- EMDB [12944]
Current status
- REL [12944]
Sample type
- Complex [12001]
- Protein [9584]
- Ligand [5663]
- RNA [1029]
- DNA [945]
- Cellular component [570]
- Virus [316]
- Cell [89]
- Other [53]
- Tissue [26]
Organism
- Homo sapiens [5278]
- Synthetic construct [879]
- Mus musculus [875]
- Escherichia coli [814]
- Severe acute respiratory syndrome coronavirus [808]
- Saccharomyces cerevisiae [451]
- Escherichia coli [343]
- Human immunodeficiency virus 1 [301]
- Rattus norvegicus [274]
- Bos taurus [232]
- Oryctolagus cuniculus [232]
- Lama glama [209]
- Sus scrofa [192]
- Xenopus laevis [167]
- Arabidopsis thaliana [130]
- Saccharomyces cerevisiae [122]
- Influenza a virus [111]
- Mycobacterium tuberculosis [106]
- Mycolicibacterium smegmatis [82]
- Macaca mulatta [82]
- Bacillus sp. (strain ps3) [80]
- Trypanosoma brucei [66]
- Vicugna pacos [64]
- Escherichia coli [61]
- Staphylococcus aureus [60]
- Bacillus subtilis [59]
- Thermus thermophilus [58]
- Plasmodium falciparum [52]
- Aequorea victoria [50]
- Drosophila melanogaster [50]
- Human herpesvirus 1 [47]
- Mycobacterium tuberculosis [47]
- Chlamydomonas reinhardtii [45]
- Lassa mammarenavirus [42]
- Trichomonas vaginalis [42]
- Gallus gallus [42]
- Pseudomonas aeruginosa [40]
- Chaetomium thermophilum [38]
- Potato virus y [37]
- Enterobacteria phage t4 [37]
- Enterobacteria phage t4 [36]
- Meiothermus taiwanensis [35]
- Schizosaccharomyces pombe [35]
- Simian virus 40 [32]
- Macaca fascicularis [32]
- Pseudomonas aeruginosa [31]
- Clostridium perfringens [30]
- Caenorhabditis elegans [30]
- Cricetulus griseus [29]
- Acetivibrio thermocellus [29]
- Thermotoga maritima [29]
- Saccharomyces cerevisiae [29]
- Salmonella enterica [29]
- Chaetomium thermophilum [28]
- Euglena gracilis [28]
- Salmonella enterica [27]
- Mycolicibacterium smegmatis [26]
- Dna molecule [26]
- Caulobacter vibrioides [26]
- Tetrahymena thermophila [26]
- Danio rerio [26]
- Ovis aries [26]
- Influenza a virus [25]
- Streptococcus pyogenes [24]
- Listeria innocua [24]
- Brassica oleracea [23]
- Tilapinevirus tilapiae [22]
- Adeno-associated dependoparvovirus a [21]
- Severe acute respiratory syndrome coronavirus [21]
- Synechocystis sp. pcc 6803 [19]
- Potyvirus atuberosi [19]
- Streptococcus thermophilus [19]
- Porcine epidemic diarrhea virus [19]
- Plasmodium falciparum [19]
- Lake sinai virus 2 [18]
- Geobacillus stearothermophilus [18]
- Clostridium botulinum [18]
- Clostridioides difficile [18]
- Escherichia coli [18]
- Methanosarcina acetivorans [18]
- Azotobacter vinelandii [18]
- Vibrio cholerae [18]
- Acinetobacter baumannii [18]
- Escherichia coli [18]
- Human coronavirus 229e [17]
- Camelidae mixed library [17]
- Aquifex aeolicus [17]
- Vibrio cholerae [17]
- Equus caballus [17]
- Human herpesvirus 1 [16]
- Epstein-barr virus (strain gd1) [16]
- Synechocystis sp. pcc 6803 [16]
- Carboxydothermus hydrogenoformans [16]
- Middle east respiratory syndrome-related coronavirus [16]
- Vigna radiata [16]
- Helicobacter pylori [16]
- Bacillus subtilis [16]
- Thermotoga maritima [16]
- Saccharolobus solfataricus [16]
- Escherichia phage ms2 [16]
EM Method
- Single-particle [12681]
- Helical reconstruction [262]
- Subtomogram averaging [1]
Resolution
- < 2Å [121]
- ≥ 2Å and < 3Å [3625]
- ≥ 3Å and < 4Å [6373]
- ≥ 4Å and < 5Å [1364]
- ≥ 5Å and < 6Å [355]
- ≥ 6Å and < 8Å [567]
- ≥ 8Å and < 12Å [287]
- ≥ 12Å and < 16Å [75]
- ≥ 16Å and < 20Å [90]
- ≥ 20Å and < 30Å [84]
- ≥ 30Å [3]
Model molecular weight
- 0-50 kDa [4]
- 50-100 kDa [24]
- 100-250 kDa [97]
- 250-500 kDa [92]
- 500-1000 kDa [51]
- 1-2 MDa [12]
- 2-5 MDa [10]
- 5-10 MDa [3]
- > 10 MDa [2]
Release Date
- 2026 [1077]
- 2025 [4097]
- 2024 [2771]
- 2023 [2049]
- 2022 [1219]
- 2021 [870]
- 2020 [554]
- 2019 [190]
- 2018 [95]
- 2017 [22]
Author by name
- Liu Y [366]
- Zhang Y [361]
- Ward AB [289]
- Gao Y [266]
- Zhang K [254]
- Zhang L [237]
- Wang J [233]
- Wang Y [227]
- Zhang S [214]
- Zhang Z [212]
- Lyumkis D [200]
- Rubinstein JL [200]
- Skiniotis G [195]
- Marks AR [189]
- Zhang X [189]
- Li S [188]
- Miotto MC [186]
- Papasergi-scott MM [184]
- Sheng K [180]
- Williamson JR [180]
- Kwong PD [178]
- Yang Y [173]
- Wang H [172]
- Panova O [169]
- Kobilka BK [168]
- Wang S [168]
- Gmeiner P [166]
- Li Y [166]
- Seven AB [165]
- Kishikawa J [161]
- Zhou ZH [161]
- Dridi H [160]
- Hilger D [160]
- Reiken S [160]
- He F [159]
- Hildebrand PW [159]
- Tchagou C [159]
- Weninger G [159]
- Hu Y [158]
- Batebi H [157]
- Casiraghi M [157]
- Eskici G [157]
- Maul L [157]
- Perez-hernandez G [157]
- Liu J [156]
- Yuan Q [154]
- Dong X [153]
- Zhang B [147]
- Kishikawa JI [144]
- Zhou J [141]
- Wang L [139]
- Wronska A [137]
- Li H [136]
- Vanden Broeck A [134]
- Wu M [134]
- Veesler D [130]
- Zhou L [130]
- Mitsuoka K [125]
- Chen Y [124]
- Klinge S [124]
- Lee J [121]
- Park J [120]
- Zhang R [120]
- Yokoyama K [119]
- Yu J [119]
- Wang X [117]
- Shapiro L [116]
- Li Z [112]
- Nakano A [112]
- Zhang J [112]
- Baker D [111]
- Zhao Y [111]
- He Z [110]
- Acharya P [109]
- Hu YQ [108]
- Han F [107]
- Ozorowski G [106]
- Bjorkman PJ [105]
- Liu S [105]
- Tian H [105]
- Aiyer S [104]
- Spahn CMT [104]
- Chai P [103]
- Kato T [103]
- Hsu STD [102]
- Park YJ [102]
- Zhou T [102]
- Hite RK [101]
- Liu Z [101]
- Gati C [100]
- Wang Q [100]
- Jiang Y [99]
- Liu B [99]
- Torres JL [99]
- Chen X [98]
- Chen Z [98]
- Guo H [97]
- He ZX [97]
- Clarke OB [96]
- Borgnia MJ [95]
Author by ORCID
- Rubinstein JL [8]
- Skiniotis G [7]
- Li H [6]
- Kwong PD [6]
- Hilger D [5]
- Czarnocki-cieciura M [5]
- Kobilka BK [5]
- Ward AB [5]
- Skowronek K [5]
- Batebi H [5]
- Gmeiner P [5]
- Panova O [5]
- He F [5]
- Gao Y [5]
- Perez-hernandez G [5]
- Hildebrand PW [5]
- Papasergi-scott MM [5]
- Guo H [4]
- Noble AJ [4]
- Stahlberg H [4]
- Zhou T [4]
- Chiu W [4]
- Clarke OB [4]
- Podobnik M [3]
- Southworth DR [3]
- Zhang K [3]
- Nowotny M [3]
- Yang J [3]
- Chai P [3]
- Kim K [3]
- Deville C [3]
- Chang YC [3]
- Kollman JM [3]
- Mer G [3]
- Tse E [3]
- Pardon E [3]
- Spahn CMT [3]
- Markus SM [3]
- Steyaert J [3]
- Arragain B [3]
- Botuyan MV [3]
- Li S [3]
- Zhou D [3]
- Wang Y [3]
- Cali T [3]
- Cusack S [3]
- Zhang K [3]
- Wysocki VH [3]
- Bukau B [3]
- Yang TJ [3]
- Johnston JD [3]
- Lauer SM [3]
- Edwards RJ [3]
- Vallese F [3]
- Nikolay R [3]
- Blaza JN [2]
- Schneider C [2]
- Sampson JM [2]
- Bell CE [2]
- Burton DR [2]
- Brohawn SG [2]
- Ekemezie CL [2]
- Huang KA [2]
- Hill CH [2]
- Prumbaum D [2]
- Hsia Y [2]
- Das R [2]
- Robinson CV [2]
- Bochtler M [2]
- Baker D [2]
- Yin P [2]
- Tan TK [2]
- Williams DR [2]
- Doudna JA [2]
- Hardwick SW [2]
- Raunser S [2]
- Zajko W [2]
- Hoffmann R [2]
- Chirgadze DY [2]
- Doyle LA [2]
- Rybak MY [2]
- Fung HYJ [2]
- Roth BL [2]
- Rebowski G [2]
- Brown CR [2]
- Crispin M [2]
- Braxton JR [2]
- Yang EC [2]
- Changrob S [2]
- Lanphere C [2]
- Bieniasz PD [2]
- James W [2]
- Merzel F [2]
- Lux MC [2]
- Slyvka A [2]
- Ni D [2]
- Roumeliotis TI [2]
- Cottrell CA [2]
- Wilson PC [2]
- Gorman J [2]
Journal
- NAT COMMUN [2795]
- TO BE PUBLISHED [1655]
- NATURE [1224]
- BIORXIV [847]
- NAT STRUCT MOL BIOL [784]
- SCIENCE [622]
- PNAS [531]
- SCI ADV [519]
- MOL CELL [430]
- CELL REP [295]
- CELL [292]
- NUCLEIC ACIDS RES [287]
- STRUCTURE [278]
- ELIFE [263]
- COMMUN BIOL [169]
- NAT CHEM BIOL [136]
- EMBO J [125]
- J BIOL CHEM [112]
- ACTA CRYSTALLOGR D STRUCT BIOL [95]
- PROTEIN SCI [91]
- CELL RES [74]
- J VIROL [68]
- PLOS PATHOG [67]
- NAT MICROBIOL [65]
- IMMUNITY [64]
- CELL HOST MICROBE [60]
- J MOL BIOL [60]
- NAT METHODS [58]
- J STRUCT BIOL [57]
- MBIO [55]
- J CLIN INV [49]
- NAT PLANTS [41]
- J AM CHEM SOC [39]
- SCI REP [39]
- J STRUCT BIOL X [37]
- PNAS NEXUS [37]
- SCI TRANSL MED [37]
- CELL DISCOV [34]
- COMMUN CHEM [34]
- EBIOMEDICINE [34]
- INT J MOL SCI [33]
- PLOS BIOL [33]
- NEURON [32]
- ISCIENCE [31]
- RES SQ [31]
- J MED CHEM [27]
- BLOOD [26]
- NPJ VACCINES [26]
- EMBO REP [22]
- J CELL BIOL [22]
- BIOCHEMISTRY [21]
- NAT NANOTECHNOL [20]
- ADV SCI [18]
- ACS NANO [17]
- NAT CATAL [17]
- COMMUN MATER [16]
- IUCRJ [16]
- FUNDAM RES [15]
- GENES DEV [14]
- J GEN VIROL [14]
- LIFE SCI ALLIANCE [14]
- VIRUSES [14]
- PLOS ONE [13]
- SCI IMMUNOL [13]
- BIOMOLECULES [12]
- FEBS LETT [12]
- NAT IMMUNOL [12]
- ACS CATAL [11]
- BIOCHEM BIOPHYS RES COMMUN [11]
- ACTA CRYSTALLOGR F STRUCT BIOL COMMUN [10]
- CELL REP MED [10]
- CURR BIOL [10]
- PROTEIN CELL [10]
- INT J BIOL MACROMOL [9]
- J EXP MED [9]
- RES COMPUT MOL BIOL [9]
- VIROLOGY [9]
- FEBS J [8]
- J.THROMB.HAEMOST. [8]
- PLANT CELL [8]
- RNA [8]
- SIGNAL TRANSDUCT TARGET THER [8]
- ACTA PHARMACOL.SIN. [7]
- BIOPHYS J [7]
- BMC METHODS [7]
- ENVIRON SCI TECHNOL. [7]
- MOL.BIOL.EVOL. [7]
- PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES USA [7]
- SMALL [7]
- FASEB J [6]
- FRONT MOL BIOSCI [6]
- MACROMOL RAPID COMMUN [6]
- NAT BIOMED ENG [6]
- NAT BIOTECHNOL [6]
- NAT MED [6]
- NAT METAB [6]
- ACS CENT SCI [5]
- BIOCHIM BIOPHYS ACTA BIOENERG [5]
- BIOMACROMOLECULES [5]
- CURR RES STRUCT BIOL [5]
Software
- CRYOSPARC [12944]
- RELION [1982]
- CTFFIND [590]
- GCTF [213]
- COOT [186]
- WARP [103]
- CISTEM [84]
- UCSF CHIMERAX [70]
- PHENIX [57]
- UCSF CHIMERA [44]
- ISOLDE [19]
- EMAN [16]
- CRYODRGN [14]
- SIMPLE [14]
- CRYOLO [13]
- FREALIGN [9]
- SCIPION [6]
- EMAN2 [5]
- EMREADY [5]
- JSPR [5]
- MOTIONCORR2 [4]
- EPU [2]
- SERIALEM [2]
- XMIPP [2]
- BSOFT [1]
- CRYOS [1]
- CRYOSPAR [1]
- IHRSR [1]
- MDFF [1]
- MPSA [1]
- RELION2.1 [1]
- ROSETTA [1]
- SPRING [1]
- TOPAZ [1]
Microscope
- FEI TITAN KRIOS [6374]
- TFS KRIOS [4140]
- FEI TALOS ARCTICA [829]
- TFS GLACIOS [730]
- JEOL CRYO ARM 300 [188]
- FEI TITAN [97]
- FEI TECNAI F30 [86]
- TFS TALOS [82]
- FEI POLARA 300 [76]
- TFS TALOS L120C [70]
- FEI TECNAI ARCTICA [58]
- FEI TECNAI F20 [49]
- FEI TECNAI SPIRIT [43]
- JEOL CRYO ARM 200 [29]
- TFS TITAN THEMIS [20]
- FEI TECNAI 20 [18]
- FEI TECNAI 12 [13]
- FEI/PHILIPS CM300FEG/T [10]
- JEOL 3200FSC [8]
- TFS TALOS F200C [7]
- FEI MORGAGNI [5]
- FEI TECNAI 10 [4]
- JEOL 2100F [3]
- JEOL 3200FS [3]
- JEOL 2100 [2]
- FEI TECNAI SPHERA [1]
- FEI/PHILIPS CM300FEG/HE [1]
- JEOL 1230 [1]
- JEOL 1400 [1]
- JEOL 2010 [1]
- JEOL 2010F [1]
- TFS TUNDRA [1]
Electron Source
- FIELD EMISSION GUN [12801]
- LAB6 [128]
- OTHER [15]
Film or detector model
- GATAN K3 6K X 4K [4165]
- GATAN K3 BIOQUANTUM 6K X 4K [3635]
- FEI FALCON IV 4K X 4K [1697]
- GATAN K2 SUMMIT 4K X 4K [1667]
- FEI FALCON III 4K X 4K [670]
- TFS FALCON 4I 4K X 4K [488]
- GATAN K2 QUANTUM 4K X 4K [186]
- GATAN K3 BIOCONTINUUM 6K X 4K [168]
- FEI CETA 4K X 4K [80]
- GATAN ULTRASCAN 4000 4K X 4K [46]
- FEI FALCON II 4K X 4K [43]
- TVIPS TEMCAM-F416 4K X 4K [32]
- OTHER [27]
- DIRECT ELECTRON APOLLO 4K X 4K [13]
- GATAN K2 BASE 4K X 4K [9]
- FEI FALCON I 4K X 4K [8]
- DIRECT ELECTRON DE-10 5K X 4K [7]
- FEI EAGLE 4K X 4K [5]
- DIRECT ELECTRON DE-20 5K X 3K [4]
- DIRECT ELECTRON DE-64 8K X 8K [3]
- DECTRIS ELA 1K X 0.5K [2]
- DIRECT ELECTRON DE-16 4K X 4K [2]
- GATAN ALPINE 2.3K X 3.2K [2]
- TVIPS TEMCAM-F816 8K X 8K [2]
- DECTRIS SINGLA 1K X 1K [1]
- GATAN K2 IS 4K X 4K [1]
- GATAN MULTISCAN [1]
- GATAN ORIUS SC200 2K X 2K [1]
- GATAN ULTRASCAN 1000 2K X 2K [1]
External links
- PDB [297]
- UniProt [279]
- PDBe-Kb [250]
- AlphaFold DB [239]
- InterPro [227]
- Gene Ontology [210]
- Pfam [210]
- ChEBI [176]
- ChEMBL [156]
- DrugBank [139]
- Complex Portal [81]
- EMPIAR [35]
- SCOP2 [4]