Electron Microscopy Data Bank

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Current Database

Current status

Sample type

Organism

Homo sapiens [124]
Torpedo marmorata [36]
Mus musculus [23]
Human immunodeficiency virus 1 [12]
Pseudomonas phage phi6 [11]
Gallus gallus [10]
Foot-and-mouth disease virus [9]
Escherichia coli [5]
Oryctolagus cuniculus [5]
Dengue virus [4]
Saccharomyces cerevisiae [4]
Pseudomonas aeruginosa [3]
Pseudomonas aeruginosa [3]
Chlamydomonas reinhardtii [3]
Synthetic construct [3]
Linum usitatissimum [3]
Sus scrofa [3]
Bos taurus [3]
Bacillus virus g [2]
Turnip mosaic virus (strain japanese) [2]
Tobacco mosaic virus [2]
Priestia megaterium [2]
Bacillus cereus [2]
Pseudomonas phage pf1 [2]
Mimivirus reunion [2]
(no species) [2]
Plasmodium falciparum [2]
Odocoileus virginianus [2]
Mesocricetus auratus [1]
Vaccinia virus [1]
Escherichia phage lambda [1]
Measles morbillivirus [1]
Rabies lyssavirus [1]
Escherichia coli [1]
Potyvirus plumpoxi [1]
Tobacco mosaic virus [1]
Zaire ebolavirus [1]
Streptococcus pneumoniae [1]
Rhodobacter capsulatus [1]
Deltainfluenzavirus influenzae [1]
Rhodococcus sp. [1]
Pyrococcus furiosus [1]
Hantaan orthohantavirus [1]
Shewanella oneidensis [1]
Aquifex aeolicus [1]
Vibrio cholerae [1]
Pseudomonas fluorescens [1]
Autographa californica multiple nucleopolyhedrovirus [1]
Thalassiosira pseudonana [1]
Rhizobium radiobacter [1]
Nicotiana tabacum [1]
Sweet potato mild mottle virus [1]
Chara corallina [1]
Saccharomyces cerevisiae [1]
Amanita phalloides [1]
Spodoptera frugiperda [1]

EM Method

Resolution

Model molecular weight

Release Date

Author by name

Unwin N [36]
Murzin AG [24]
Ghetti B [22]
Fandrich M [18]
Schmidt M [18]
Faendrich M [15]
Ang LC [13]
Castellani R [13]
Das S [13]
De Coster W [13]
Herms J [13]
Joseph JT [13]
Lashley T [13]
Mackenzie IRA [13]
Neumann M [13]
Newell K [13]
Rademakers R [13]
Roeber S [13]
Ryskeldi-falcon B [13]
Synofzik M [13]
Tetter S [13]
Van Den Broeck M [13]
Varghese NR [13]
Goedert M [12]
Iqbal N [12]
Kvaratskhelia M [12]
Modis Y [12]
Scheres SHW [12]
Yu Q [12]
Asturias F [11]
Frost A [11]
Bhella D [10]
Streetley J [10]
Talledge N [10]
Falcon B [9]
Garringer HJ [9]
Harris M [9]
Herod MJ [9]
Herod MR [9]
Loundras EA [9]
Nguyen BA [9]
Saelices L [9]
Stonehouse NJ [9]
Thompson R [9]
Wiese S [9]
Alushin GM [8]
Baur J [8]
Mccullough J [8]
Nguyen HC [8]
Qu K [8]
Sundquist WI [8]
Afrin S [7]
Ahmed Y [7]
Alian A [7]
Bassett P [7]
Bullitt E [7]
Crowther RA [7]
Dempsey N [7]
Doran MH [7]
Glover J [7]
Iwasa J [7]
Kluve-beckerman B [7]
Lajoie D [7]
Lalonde MS [7]
Laughlin TG [7]
Lemoff A [7]
Martin-serrano J [7]
Padilla-parra S [7]
Pekala M [7]
Pfeiffer PB [7]
Reynolds MJ [7]
Sadler JBA [7]
Singh P [7]
Singh V [7]
Starling T [7]
Ullman KS [7]
Ventimiglia LN [7]
Wenzel D [7]
Duan P [6]
Gong R [6]
Hegenbart U [6]
Hong M [6]
Schwierz N [6]
Wu B [6]
Xu C [6]
Berbon M [5]
Kupfer N [5]
Loquet A [5]
Nguyen B [5]
Schonland SO [5]
Tan EYJ [5]
Ugrina M [5]
Vidal R [5]
Voth GA [5]
Zhang W [5]
Annamalai AS [4]
Appleby R [4]
Bharat TAM [4]
Bird JE [4]
Bolognesi M [4]

Author by ORCID

Synofzik M [13]
De Coster W [13]
Ryskeldi-falcon B [13]
Frost A [10]
Streetley J [9]
Loundras EA [9]
Thompson R [9]
Talledge N [9]
Falcon B [9]
Herod MR [9]
Schmidt M [9]
Harris M [9]
Stonehouse NJ [9]
Bhella D [9]
Fandrich M [9]
Alushin GM [8]
Kvaratskhelia M [8]
Mccullough J [7]
Laughlin TG [7]
Sundquist WI [7]
Scheres SHW [7]
Garringer HJ [7]
Reynolds MJ [7]
Wenzel D [7]
Iwasa J [7]
Nguyen HC [7]
Martin-serrano J [7]
Alian A [7]
Ullman KS [7]
Wiese S [6]
Hegenbart U [6]
Loquet A [5]
Zhang W [5]
Iqbal N [5]
Voth GA [5]
Schonland SO [5]
Chatterjee A [4]
Bird JE [4]
Murshudov G [4]
Gong R [4]
Heidings JB [4]
Bowl MR [4]
Herrero Del Valle A [4]
Singh R [4]
Yu Q [4]
Shams A [4]
Bharat TAM [4]
Ghetti B [4]
Griffin PR [4]
Asturias F [4]
Ranson NA [4]
Goo L [4]
Prasad VM [4]
Doran MH [4]
Modis Y [4]
Lubow J [4]
Wei G [4]
Francis AC [4]
Singh PK [4]
Engelman AN [4]
Chaves-sanjuan A [4]
Moreland ZG [4]
De Los Reyes Se [4]
Jiang F [4]
Roy A [4]
Srinivasan S [4]
Baek Y [3]
Evers B [3]
Paras NA [3]
Steinmetz MO [3]
Garcia-castellanos R [3]
Tycko R [3]
Nguyen BA [3]
Southworth DR [3]
Bester S [3]
Vasquez-montes V [3]
Surrey T [3]
Shenoy J [3]
Scheres SH [3]
Logemann E [3]
Steinebrei M [3]
Ruhnow F [3]
Wu B [3]
Stahlberg H [3]
Schoehn G [3]
Mizuno N [3]
Blum TB [3]
Saelices L [3]
Tse E [3]
Westermark P [3]
Radford SE [3]
Kewalramani VN [3]
Huang SW [3]
Hudait A [3]
Rynkiewicz MJ [3]
Lemoff A [3]
Bodt SML [3]
Vidal R [3]
Singh V [3]
Bolognesi M [3]

Journal

PNAS [54]
NAT COMMUN [52]
TO BE PUBLISHED [33]
BIORXIV [26]
COMMUN BIOL [14]
ELIFE [10]
MOL CELL [10]
NATURE [8]
CELL [7]
J MOL BIOL [7]
SCI ADV [7]
EMBO J [5]
STRUCTURE [5]
ACTA NEUROPATHOL [4]
J BIOL CHEM [4]
NAT STRUCT MOL BIOL [4]
J GEN PHYSIOL [3]
J STRUCT BIOL [3]
SCIENCE [3]
VIRUSES [3]
FEBS LETT [2]
ISCIENCE [2]
J AM CHEM SOC [2]
MICROLIFE [2]
NAT CELL BIOL [2]
PLOS PATHOG [2]
SCI REP [2]
ACS NANO [1]
ACTA CRYSTALLOGR D STRUCT BIOL [1]
ACTA CRYSTALLOGR F STRUCT BIOL COMMUN [1]
AM J KIDNEY DIS [1]
ANNU REV BIOPHYS [1]
ARCH VIROL [1]
BIOL CELLULAIRE [1]
BIOPHYS J [1]
CURR TOP DEV BIOL [1]
INT J MOL SCI [1]
KIDNEY INT [1]
MOL BIOL CELL [1]
NAT CHEM BIOL [1]
NUCLEIC ACIDS RES [1]
PROC SOC EXP BIOL MED [1]
ULTRAMICROSCOPY [1]

Software

Microscope

Electron Source

Film or detector model

External links

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EMD-69801

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Averaged protofilament of Heimdallarchaeales alpha/beta tubulin microtubule with a single seam

CryoEM

Release date: June 24, 2026
Resolution: 2.4 Å
EM Method: Helical reconstruction
Fitted PDBs: 24sv
Q-score: 0.659

Tran LT, Ali S, Matsumoto T, Yamazaki Y, Narita A, Miyazaki M, Robinson RC

To Be Published

EMD-69802

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Heimdallarchaeales alpha/beta tubulin microtubule with three seams

CryoEM

Release date: June 10, 2026
Resolution: 3.9 Å
EM Method: Helical reconstruction
Fitted PDBs: 24sw
Q-score: 0.314

Tran LT, Ali S, Matsumoto T, Yamazaki Y, Narita A, Miyazaki M, Robinson RC

To Be Published

EMD-63809

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Helical Reconstruction of DENV2 US/BID-V594/2006 tubular particles bound with D14.F25.S02 fab

CryoEM

Release date: April 29, 2026
Resolution: 14.7 Å
EM Method: Helical reconstruction
Fitted PDBs: 9u34
Q-score: 0.052

Chatterjee A, Roy A, Srinivasan S, Charles S, Lubow J, Goo L, Prasad VM

To Be Published

EMD-74399

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Cryo-EM structure of hepatic amyloid fibril from a variant ATTRV122delta, single filament morphology

CryoEM

Release date: April 15, 2026
Resolution: 2.9 Å
EM Method: Helical reconstruction
Fitted PDBs: 9zld
Q-score: 0.561

Nguyen BA, Fernandez-Ramirez MDC, Bassett P, Singh V, Singh P, Pekala M, Villalon L, Ahmed Y, Lemoff A, Evers B, Lopez C, Kluve-Beckerman B, Saelices L

Nat Commun (2026) 17 [ DOI: doi:10.1038/s41467-026-72150-z Pubmed: 41991931 ]

EMD-63810

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Helical Reconstruction of DENV2 THSTI/TRC/01 tubular particles bound with D14.F25.S02 fab

CryoEM

Release date: April 8, 2026
Resolution: 17.37 Å
EM Method: Helical reconstruction
Fitted PDBs: 9u35
Q-score: 0.032

Chatterjee A, Roy A, Srinivasan S, Charles S, Lubow J, Goo L, Prasad VM

To Be Published

EMD-63762

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Helical Reconstruction of DENV2 US/BID-V594/2006 tubular particles bound with J9 fab

CryoEM

Release date: April 1, 2026
Resolution: 38.5 Å
EM Method: Helical reconstruction
Fitted PDBs: 9maz
Q-score: 0.011

Chatterjee A, Roy A, Srinivasan S, Charles S, Lubow J, Goo L, Prasad VM

To Be Published

EMD-63764

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Helical Reconstruction of DENV2 THSTI/TRC/01 tubular particles bound with J9 fab

CryoEM

Release date: April 1, 2026
Resolution: 14.41 Å
EM Method: Helical reconstruction
Fitted PDBs: 9mb1
Q-score: 0.047

Chatterjee A, Roy A, Srinivasan S, Charles S, Lubow J, Goo L, Prasad VM

To Be Published

EMD-53571

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13 protofilament P. falciparum paclitaxel stabilised GDP microtubule

CryoEM

Release date: March 11, 2026
Resolution: 3.2 Å
EM Method: Helical reconstruction
Fitted PDBs: 9r4x

Bangera M, Wu J, Beckett D, Fachet D, Ferreira JL, Voth GA, Reber S, Moores CA

Nat Commun (2026) 17 [ DOI: doi:10.1038/s41467-026-70181-0 Pubmed: 41786731 ]

EMD-53572

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15 protofilament P. falciparum GMPCPP microtubule

CryoEM

Release date: March 11, 2026
Resolution: 2.9 Å
EM Method: Helical reconstruction
Fitted PDBs: 9r4y

Bangera M, Wu J, Beckett D, Fachet D, Ferreira JL, Voth GA, Reber S, Moores CA

Nat Commun (2026) 17 [ DOI: doi:10.1038/s41467-026-70181-0 Pubmed: 41786731 ]

EMD-53450

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Structure of the Plum Pox Virus PPV

CryoEM

Release date: Feb. 25, 2026
Resolution: 2.9 Å
EM Method: Helical reconstruction
Fitted PDBs: 9qy3
Q-score: 0.624

Bonnet DMVJ, Chaves-Sanjuan A, Contaldo N, De Stradis A, Caliandro R, Minafra A, Geuna F

Arch Virol (2025) 171 pp. 11-11 [ DOI: doi:10.1007/s00705-025-06473-5 Pubmed: 41326719 ]

Sort by: Download

Showing 1 - 10 of 268. Page 1 of 27

Display:

Statistics

Download

Select database:

EMDB [268]

Format:

Select the script type:

Shell (Unix-based) Batch (Windows-based)

Preview first 10

Download

Filter By

Current Database

Current status

Sample type

Organism

Homo sapiens [124]
Torpedo marmorata [36]
Mus musculus [23]
Human immunodeficiency virus 1 [12]
Pseudomonas phage phi6 [11]
Gallus gallus [10]
Foot-and-mouth disease virus [9]
Escherichia coli [5]
Oryctolagus cuniculus [5]
Dengue virus [4]
Saccharomyces cerevisiae [4]
Pseudomonas aeruginosa [3]
Pseudomonas aeruginosa [3]
Chlamydomonas reinhardtii [3]
Synthetic construct [3]
Linum usitatissimum [3]
Sus scrofa [3]
Bos taurus [3]
Bacillus virus g [2]
Turnip mosaic virus (strain japanese) [2]
Tobacco mosaic virus [2]
Priestia megaterium [2]
Bacillus cereus [2]
Pseudomonas phage pf1 [2]
Mimivirus reunion [2]
(no species) [2]
Plasmodium falciparum [2]
Odocoileus virginianus [2]
Mesocricetus auratus [1]
Vaccinia virus [1]
Escherichia phage lambda [1]
Measles morbillivirus [1]
Rabies lyssavirus [1]
Escherichia coli [1]
Potyvirus plumpoxi [1]
Tobacco mosaic virus [1]
Zaire ebolavirus [1]
Streptococcus pneumoniae [1]
Rhodobacter capsulatus [1]
Deltainfluenzavirus influenzae [1]
Rhodococcus sp. [1]
Pyrococcus furiosus [1]
Hantaan orthohantavirus [1]
Shewanella oneidensis [1]
Aquifex aeolicus [1]
Vibrio cholerae [1]
Pseudomonas fluorescens [1]
Autographa californica multiple nucleopolyhedrovirus [1]
Thalassiosira pseudonana [1]
Rhizobium radiobacter [1]
Nicotiana tabacum [1]
Sweet potato mild mottle virus [1]
Chara corallina [1]
Saccharomyces cerevisiae [1]
Amanita phalloides [1]
Spodoptera frugiperda [1]

EM Method

Resolution

Model molecular weight

Release Date

Author by name

Unwin N [36]
Murzin AG [24]
Ghetti B [22]
Fandrich M [18]
Schmidt M [18]
Faendrich M [15]
Ang LC [13]
Castellani R [13]
Das S [13]
De Coster W [13]
Herms J [13]
Joseph JT [13]
Lashley T [13]
Mackenzie IRA [13]
Neumann M [13]
Newell K [13]
Rademakers R [13]
Roeber S [13]
Ryskeldi-falcon B [13]
Synofzik M [13]
Tetter S [13]
Van Den Broeck M [13]
Varghese NR [13]
Goedert M [12]
Iqbal N [12]
Kvaratskhelia M [12]
Modis Y [12]
Scheres SHW [12]
Yu Q [12]
Asturias F [11]
Frost A [11]
Bhella D [10]
Streetley J [10]
Talledge N [10]
Falcon B [9]
Garringer HJ [9]
Harris M [9]
Herod MJ [9]
Herod MR [9]
Loundras EA [9]
Nguyen BA [9]
Saelices L [9]
Stonehouse NJ [9]
Thompson R [9]
Wiese S [9]
Alushin GM [8]
Baur J [8]
Mccullough J [8]
Nguyen HC [8]
Qu K [8]
Sundquist WI [8]
Afrin S [7]
Ahmed Y [7]
Alian A [7]
Bassett P [7]
Bullitt E [7]
Crowther RA [7]
Dempsey N [7]
Doran MH [7]
Glover J [7]
Iwasa J [7]
Kluve-beckerman B [7]
Lajoie D [7]
Lalonde MS [7]
Laughlin TG [7]
Lemoff A [7]
Martin-serrano J [7]
Padilla-parra S [7]
Pekala M [7]
Pfeiffer PB [7]
Reynolds MJ [7]
Sadler JBA [7]
Singh P [7]
Singh V [7]
Starling T [7]
Ullman KS [7]
Ventimiglia LN [7]
Wenzel D [7]
Duan P [6]
Gong R [6]
Hegenbart U [6]
Hong M [6]
Schwierz N [6]
Wu B [6]
Xu C [6]
Berbon M [5]
Kupfer N [5]
Loquet A [5]
Nguyen B [5]
Schonland SO [5]
Tan EYJ [5]
Ugrina M [5]
Vidal R [5]
Voth GA [5]
Zhang W [5]
Annamalai AS [4]
Appleby R [4]
Bharat TAM [4]
Bird JE [4]
Bolognesi M [4]

Author by ORCID

Synofzik M [13]
De Coster W [13]
Ryskeldi-falcon B [13]
Frost A [10]
Streetley J [9]
Loundras EA [9]
Thompson R [9]
Talledge N [9]
Falcon B [9]
Herod MR [9]
Schmidt M [9]
Harris M [9]
Stonehouse NJ [9]
Bhella D [9]
Fandrich M [9]
Alushin GM [8]
Kvaratskhelia M [8]
Mccullough J [7]
Laughlin TG [7]
Sundquist WI [7]
Scheres SHW [7]
Garringer HJ [7]
Reynolds MJ [7]
Wenzel D [7]
Iwasa J [7]
Nguyen HC [7]
Martin-serrano J [7]
Alian A [7]
Ullman KS [7]
Wiese S [6]
Hegenbart U [6]
Loquet A [5]
Zhang W [5]
Iqbal N [5]
Voth GA [5]
Schonland SO [5]
Chatterjee A [4]
Bird JE [4]
Murshudov G [4]
Gong R [4]
Heidings JB [4]
Bowl MR [4]
Herrero Del Valle A [4]
Singh R [4]
Yu Q [4]
Shams A [4]
Bharat TAM [4]
Ghetti B [4]
Griffin PR [4]
Asturias F [4]
Ranson NA [4]
Goo L [4]
Prasad VM [4]
Doran MH [4]
Modis Y [4]
Lubow J [4]
Wei G [4]
Francis AC [4]
Singh PK [4]
Engelman AN [4]
Chaves-sanjuan A [4]
Moreland ZG [4]
De Los Reyes Se [4]
Jiang F [4]
Roy A [4]
Srinivasan S [4]
Baek Y [3]
Evers B [3]
Paras NA [3]
Steinmetz MO [3]
Garcia-castellanos R [3]
Tycko R [3]
Nguyen BA [3]
Southworth DR [3]
Bester S [3]
Vasquez-montes V [3]
Surrey T [3]
Shenoy J [3]
Scheres SH [3]
Logemann E [3]
Steinebrei M [3]
Ruhnow F [3]
Wu B [3]
Stahlberg H [3]
Schoehn G [3]
Mizuno N [3]
Blum TB [3]
Saelices L [3]
Tse E [3]
Westermark P [3]
Radford SE [3]
Kewalramani VN [3]
Huang SW [3]
Hudait A [3]
Rynkiewicz MJ [3]
Lemoff A [3]
Bodt SML [3]
Vidal R [3]
Singh V [3]
Bolognesi M [3]

Journal

PNAS [54]
NAT COMMUN [52]
TO BE PUBLISHED [33]
BIORXIV [26]
COMMUN BIOL [14]
ELIFE [10]
MOL CELL [10]
NATURE [8]
CELL [7]
J MOL BIOL [7]
SCI ADV [7]
EMBO J [5]
STRUCTURE [5]
ACTA NEUROPATHOL [4]
J BIOL CHEM [4]
NAT STRUCT MOL BIOL [4]
J GEN PHYSIOL [3]
J STRUCT BIOL [3]
SCIENCE [3]
VIRUSES [3]
FEBS LETT [2]
ISCIENCE [2]
J AM CHEM SOC [2]
MICROLIFE [2]
NAT CELL BIOL [2]
PLOS PATHOG [2]
SCI REP [2]
ACS NANO [1]
ACTA CRYSTALLOGR D STRUCT BIOL [1]
ACTA CRYSTALLOGR F STRUCT BIOL COMMUN [1]
AM J KIDNEY DIS [1]
ANNU REV BIOPHYS [1]
ARCH VIROL [1]
BIOL CELLULAIRE [1]
BIOPHYS J [1]
CURR TOP DEV BIOL [1]
INT J MOL SCI [1]
KIDNEY INT [1]
MOL BIOL CELL [1]
NAT CHEM BIOL [1]
NUCLEIC ACIDS RES [1]
PROC SOC EXP BIOL MED [1]
ULTRAMICROSCOPY [1]

Software

Microscope

Electron Source

Film or detector model

External links