Electron Microscopy Data Bank

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Current Database

Current status

Sample type

Organism

Homo sapiens [120]
Mus musculus [94]
Saccharomyces cerevisiae [58]
(no species) [30]
Yersinia entomophaga [23]
Nostoc sp. (strain pcc 7120 / sag 25.82 / utex 2576) [22]
Saccharomyces cerevisiae [21]
Chlamydomonas reinhardtii [15]
Rattus norvegicus [13]
(no species) [13]
Roseiflexus castenholzii [10]
Zaire ebolavirus [9]
Bacillus subtilis [9]
Physcomitrium patens [9]
Thalassiosira pseudonana [9]
Escherichia coli [9]
Severe acute respiratory syndrome coronavirus [8]
Spinacia oleracea [8]
Oenococcus oeni [7]
Chrysotila carterae [7]
Oenococcus phage phioe33pa [7]
Caenorhabditis elegans [7]
Drosophila melanogaster [7]
Synechocystis sp. pcc 6803 [5]
Porphyridium purpureum [5]
Candidatus amoebophilus asiaticus [5]
Pseudomonas aeruginosa [4]
Legionella pneumophila [4]
Enterococcus faecium [3]
Mumps orthorubulavirus [3]
Candidatus viridilinea mediisalina [3]
Dictyostelium discoideum [3]
Allium cepa [3]
Caulobacter vibrioides [3]
Bombyx mori [3]
Escherichia coli [3]
Lithobates catesbeianus [3]
Caulobacter vibrioides [2]
Corynebacterium glutamicum [2]
Aureispira sp. [2]
Bacillus subtilis [2]
Thermoanaerobacter kivui [2]
Alphainfluenzavirus influenzae [2]
Toxoplasma gondii [2]
Haloferax elongans [2]
Halogeometricum borinquense [2]
Saccharomyces cerevisiae [2]
Brochothrix phage nf5 [2]
Coxiella burnetii [2]
Danio rerio [2]
Streptomyces coelicolor [1]
Mus sp. [1]
Bacillus phage spp1 [1]
Adeno-associated dependoparvovirus a [1]
Synechococcus elongatus [1]
Aureispira sp. ccb-qb1 [1]
Nannochloropsis oceanica [1]
Burkholderia thailandensis [1]
Limonium bicolor [1]
Arabidopsis thaliana [1]
Psychrobacter urativorans [1]
Deinococcus aquatilis [1]
Tetrahymena thermophila [1]
Calidithermus chliarophilus [1]
(no species) [1]

EM Method

Resolution

Release Date

Author by name

Baumeister W [116]
Pilhofer M [95]
Plitzko JM [49]
Chlanda P [48]
Weiss GL [48]
Wilfling F [46]
Engel BD [44]
Fernandez-busnadiego R [44]
Zhang X [42]
Wachsmuth-melm M [41]
Makroczyova J [38]
Beck F [37]
Guo Q [31]
Schulman BA [31]
Jasnin M [30]
Ananda VY [29]
Chao LH [29]
Navarro PP [29]
Gaisin VA [28]
Li W [28]
Sali A [28]
Sun L [28]
Villa E [28]
Wollweber F [28]
Peterl S [27]
Wietrzynski W [27]
Li A [26]
Liu X [26]
Stevens R [26]
Stevens RC [26]
White K [26]
White KL [26]
Yu B [26]
Gaisin AV [25]
Hadjicharalambous C [25]
Koblizek M [25]
Li J [25]
Mujakic I [25]
Schaffer M [25]
Villena-alemany C [25]
Erdmann PS [23]
Feldmuller M [23]
Fischer K [23]
Lien YW [23]
Mahamid J [23]
Ali I [22]
Chan DC [22]
Fry MY [22]
Ge Y [22]
Ha LL [22]
Hakim P [22]
Inde Z [22]
Kleinstiver BP [22]
Landoni JC [22]
Luce BE [22]
Lugo CM [22]
Mcdonald JL [22]
Qin X [22]
Rath S [22]
Sarosiek KA [22]
Elferich J [21]
Xu J [21]
Afanasyev P [20]
Ericson CF [20]
Feldmueller M [20]
Hurst M [20]
Qu L [20]
Schoof M [20]
Tang X [20]
Du W [19]
Klumpe S [19]
Plitzko J [18]
Enenkel C [17]
Ernst OP [17]
Hummer G [17]
Klein S [17]
Maldener I [17]
Pogliano K [17]
Collado J [16]
Kieninger AK [16]
Li D [16]
Winter SL [16]
Amorim MJ [15]
Beck M [15]
Krischuns T [15]
Li Z [15]
O Riain A [15]
Poege M [15]
Vale-costa S [15]
Bohnert M [14]
Diep DTV [14]
Fausten RM [14]
Gouaux E [14]
Harper JW [14]
Hugenroth M [14]
Khanna K [14]
Kim H [14]
Kolovou A [14]
Li M [14]
Matsui A [14]

Author by ORCID

Pilhofer M [82]
Weiss GL [48]
Baumeister W [47]
Chlanda P [47]
Wilfling F [46]
Engel BD [44]
Plitzko JM [44]
Wachsmuth-melm M [33]
Schulman BA [31]
Jasnin M [30]
Chao LH [29]
Gaisin VA [28]
Fernandez-busnadiego R [28]
Wollweber F [28]
Sali A [26]
Sun L [26]
Zhang X [26]
Mujakic I [25]
Koblizek M [25]
Villena-alemany C [25]
Li J [25]
Guo Q [24]
Feldmuller M [23]
Lien YW [23]
Inde Z [22]
Ge Y [22]
Chan DC [22]
Landoni JC [22]
Mcdonald JL [22]
Sarosiek KA [22]
Hakim P [22]
Qin X [22]
Ha LL [22]
Lugo CM [22]
Villa E [21]
Hurst M [20]
Makroczyova J [20]
Schoof M [20]
Ericson CF [20]
Afanasyev P [20]
Klumpe S [19]
Xu J [19]
Mahamid J [18]
Hummer G [17]
Klein S [16]
Li D [16]
Vale-costa S [15]
O'riain A [15]
Amorim MJ [15]
Khanna K [14]
Harper JW [14]
Bohnert M [14]
Gouaux E [14]
Walters KJ [13]
Chen X [13]
Kukulski W [13]
Pogliano K [13]
Kolovou A [13]
Kraus F [12]
Kim J [11]
Lolicato F [11]
Erdmann PS [11]
Wietrzynski W [11]
Nyman M [11]
Klena N [11]
Spangler CJ [11]
Li M [11]
Liu Q [10]
Brecht R [10]
Zhu X [10]
Schaffer M [10]
Gui M [10]
Fung HKH [10]
Lahr C [10]
Hosseinzadeh M [10]
Reddmann N [10]
Beyer D [10]
Schuller JM [10]
Elferich J [10]
Ma S [10]
Brenner J [10]
Muller CW [10]
Herrmann A [10]
Zagoriy I [10]
Li L [10]
Coscia F [9]
Vazzana R [9]
Vallbracht M [9]
Matos J [9]
Demulder M [9]
Beck M [9]
Kalebic N [9]
Silva M [9]
Perone G [9]
Sugie J [9]
Hugener J [9]
Nguyen HTD [9]
Bieber A [8]
Lizarrondo J [8]
Bartenschlager R [8]

Journal

NAT COMMUN [88]
CELL [65]
TO BE PUBLISHED [59]
BIORXIV [56]
ELIFE [52]
PNAS [40]
NAT MICROBIOL [31]
ISME J [25]
EMBO J [23]
DEV CELL [19]
NAT METHODS [19]
SCIENCE [17]
CELL HOST MICROBE [14]
STRUCTURE [13]
MOL CELL [12]
SCI ADV [12]
CELL REP [11]
NAT PLANTS [9]
J CELL BIOL [7]
J STRUCT BIOL [6]
NATURE [6]
PLOS BIOL [5]
COMMUN BIOL [4]
MBIO [4]
SCI REP [4]
CURR BIOL [3]
FRONT MICROBIOL [3]
NAT STRUCT MOL BIOL [3]
PLOS COMPUT BIOL [3]
ADV SCI [2]
INFECT.IMMUN. [2]
J CELL SCI [2]
NUCLEIC ACIDS RES [2]
ACTA CRYSTALLOGR D STRUCT BIOL [1]
BIOL IMAGING [1]
CELL MOL IMMUNOL [1]
CELL REP METHODS [1]
EMBO REP [1]
MICRO PUBL BIOL [1]
MICROSC MICROANAL [1]
MOL BIOL CELL [1]
NAT MATER [1]
NAT PROTOC [1]

Software

Microscope

Electron Source

Film or detector model

External links

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Showing 1 - 10 of 601. Page 1 of 61

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EMDB [601]

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EMD-68842

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3D View

Tomogram of mouse liver tissue containning urate oxidase assembly

CryoEM

Release date: July 8, 2026
EM Method: Tomography

Yang JH

To Be Published

EMD-55733

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3D View

Cryo-electron tomogram of septal region from Nostoc PCC7120 wild type

CryoEM

Release date: June 24, 2026
EM Method: Tomography

Kieninger AK, Li Y, Janovic A, Tokarz P, Maldener I, Weiss GL

To Be Published

EMD-55734

Download Map

3D View

Cryo-electron tomogram of septal region from Nostoc PCC7120 FraD-TM

CryoEM

Release date: June 24, 2026
EM Method: Tomography

Kieninger AK, Li Y, Janovic A, Tokarz P, Maldener I, Weiss GL

To Be Published

EMD-55735

Download Map

3D View

Cryo-electron tomogram of septal region from Nostoc PCC7120 FraD-TM

CryoEM

Release date: June 24, 2026
EM Method: Tomography

Kieninger AK, Li Y, Janovic A, Tokarz P, Maldener I, Weiss GL

To Be Published

EMD-57915

Download Map

3D View

Siphohage OE33PA upon binding to its Gram host cell surface view 1

CryoEM

Release date: June 17, 2026
EM Method: Tomography

Schmitt L, Chaib A, Ptchelkine D, Kandiah E, Le Marrec C, Cambillau C, Goulet A

bioRxiv (2026) [ DOI: doi:10.64898/2026.05.20.726473 Pubmed: 42244550 ]

EMD-57916

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3D View

Siphohage OE33PA upon binding to its Gram host cell surface view 2

CryoEM

Release date: June 17, 2026
EM Method: Tomography

Schmitt L, Chaib A, Ptchelkine D, Kandiah E, Le Marrec C, Cambillau C, Goulet A

bioRxiv (2026) [ DOI: doi:10.64898/2026.05.20.726473 Pubmed: 42244550 ]

EMD-57918

Download Map

3D View

Siphohage OE33PA upon binding to its Gram host cell surface view 3

CryoEM

Release date: June 17, 2026
EM Method: Tomography

Schmitt L, Chaib A, Ptchelkine D, Kandiah E, Le Marrec C, Cambillau C, Goulet A

bioRxiv (2026) [ DOI: doi:10.64898/2026.05.20.726473 Pubmed: 42244550 ]

EMD-57919

Download Map

3D View

Siphohage OE33PA upon binding to its Gram host cell surface view 4

CryoEM

Release date: June 17, 2026
EM Method: Tomography

Schmitt L, Chaib A, Ptchelkine D, Kandiah E, Le Marrec C, Cambillau C, Goulet A

bioRxiv (2026) [ DOI: doi:10.64898/2026.05.20.726473 Pubmed: 42244550 ]

EMD-57920

Download Map

3D View

Siphohage OE33PA upon binding to its Gram host cell surface view 5

CryoEM

Release date: June 17, 2026
EM Method: Tomography

Schmitt L, Chaib A, Ptchelkine D, Kandiah E, Le Marrec C, Cambillau C, Goulet A

bioRxiv (2026) [ DOI: doi:10.64898/2026.05.20.726473 Pubmed: 42244550 ]

EMD-57921

Download Map

3D View

Siphohage OE33PA upon binding to its Gram host cell surface view 6

CryoEM

Release date: June 17, 2026
EM Method: Tomography

Schmitt L, Chaib A, Ptchelkine D, Kandiah E, Le Marrec C, Cambillau C, Goulet A

bioRxiv (2026) [ DOI: doi:10.64898/2026.05.20.726473 Pubmed: 42244550 ]

Sort by: Download

Showing 1 - 10 of 601. Page 1 of 61

Display:

Statistics

Download

Select database:

EMDB [601]

Format:

Select the script type:

Shell (Unix-based) Batch (Windows-based)

Preview first 10

Download

Filter By

Current Database

Current status

Sample type

Organism

Homo sapiens [120]
Mus musculus [94]
Saccharomyces cerevisiae [58]
(no species) [30]
Yersinia entomophaga [23]
Nostoc sp. (strain pcc 7120 / sag 25.82 / utex 2576) [22]
Saccharomyces cerevisiae [21]
Chlamydomonas reinhardtii [15]
Rattus norvegicus [13]
(no species) [13]
Roseiflexus castenholzii [10]
Zaire ebolavirus [9]
Bacillus subtilis [9]
Physcomitrium patens [9]
Thalassiosira pseudonana [9]
Escherichia coli [9]
Severe acute respiratory syndrome coronavirus [8]
Spinacia oleracea [8]
Oenococcus oeni [7]
Chrysotila carterae [7]
Oenococcus phage phioe33pa [7]
Caenorhabditis elegans [7]
Drosophila melanogaster [7]
Synechocystis sp. pcc 6803 [5]
Porphyridium purpureum [5]
Candidatus amoebophilus asiaticus [5]
Pseudomonas aeruginosa [4]
Legionella pneumophila [4]
Enterococcus faecium [3]
Mumps orthorubulavirus [3]
Candidatus viridilinea mediisalina [3]
Dictyostelium discoideum [3]
Allium cepa [3]
Caulobacter vibrioides [3]
Bombyx mori [3]
Escherichia coli [3]
Lithobates catesbeianus [3]
Caulobacter vibrioides [2]
Corynebacterium glutamicum [2]
Aureispira sp. [2]
Bacillus subtilis [2]
Thermoanaerobacter kivui [2]
Alphainfluenzavirus influenzae [2]
Toxoplasma gondii [2]
Haloferax elongans [2]
Halogeometricum borinquense [2]
Saccharomyces cerevisiae [2]
Brochothrix phage nf5 [2]
Coxiella burnetii [2]
Danio rerio [2]
Streptomyces coelicolor [1]
Mus sp. [1]
Bacillus phage spp1 [1]
Adeno-associated dependoparvovirus a [1]
Synechococcus elongatus [1]
Aureispira sp. ccb-qb1 [1]
Nannochloropsis oceanica [1]
Burkholderia thailandensis [1]
Limonium bicolor [1]
Arabidopsis thaliana [1]
Psychrobacter urativorans [1]
Deinococcus aquatilis [1]
Tetrahymena thermophila [1]
Calidithermus chliarophilus [1]
(no species) [1]

EM Method

Resolution

Release Date

Author by name

Baumeister W [116]
Pilhofer M [95]
Plitzko JM [49]
Chlanda P [48]
Weiss GL [48]
Wilfling F [46]
Engel BD [44]
Fernandez-busnadiego R [44]
Zhang X [42]
Wachsmuth-melm M [41]
Makroczyova J [38]
Beck F [37]
Guo Q [31]
Schulman BA [31]
Jasnin M [30]
Ananda VY [29]
Chao LH [29]
Navarro PP [29]
Gaisin VA [28]
Li W [28]
Sali A [28]
Sun L [28]
Villa E [28]
Wollweber F [28]
Peterl S [27]
Wietrzynski W [27]
Li A [26]
Liu X [26]
Stevens R [26]
Stevens RC [26]
White K [26]
White KL [26]
Yu B [26]
Gaisin AV [25]
Hadjicharalambous C [25]
Koblizek M [25]
Li J [25]
Mujakic I [25]
Schaffer M [25]
Villena-alemany C [25]
Erdmann PS [23]
Feldmuller M [23]
Fischer K [23]
Lien YW [23]
Mahamid J [23]
Ali I [22]
Chan DC [22]
Fry MY [22]
Ge Y [22]
Ha LL [22]
Hakim P [22]
Inde Z [22]
Kleinstiver BP [22]
Landoni JC [22]
Luce BE [22]
Lugo CM [22]
Mcdonald JL [22]
Qin X [22]
Rath S [22]
Sarosiek KA [22]
Elferich J [21]
Xu J [21]
Afanasyev P [20]
Ericson CF [20]
Feldmueller M [20]
Hurst M [20]
Qu L [20]
Schoof M [20]
Tang X [20]
Du W [19]
Klumpe S [19]
Plitzko J [18]
Enenkel C [17]
Ernst OP [17]
Hummer G [17]
Klein S [17]
Maldener I [17]
Pogliano K [17]
Collado J [16]
Kieninger AK [16]
Li D [16]
Winter SL [16]
Amorim MJ [15]
Beck M [15]
Krischuns T [15]
Li Z [15]
O Riain A [15]
Poege M [15]
Vale-costa S [15]
Bohnert M [14]
Diep DTV [14]
Fausten RM [14]
Gouaux E [14]
Harper JW [14]
Hugenroth M [14]
Khanna K [14]
Kim H [14]
Kolovou A [14]
Li M [14]
Matsui A [14]

Author by ORCID

Pilhofer M [82]
Weiss GL [48]
Baumeister W [47]
Chlanda P [47]
Wilfling F [46]
Engel BD [44]
Plitzko JM [44]
Wachsmuth-melm M [33]
Schulman BA [31]
Jasnin M [30]
Chao LH [29]
Gaisin VA [28]
Fernandez-busnadiego R [28]
Wollweber F [28]
Sali A [26]
Sun L [26]
Zhang X [26]
Mujakic I [25]
Koblizek M [25]
Villena-alemany C [25]
Li J [25]
Guo Q [24]
Feldmuller M [23]
Lien YW [23]
Inde Z [22]
Ge Y [22]
Chan DC [22]
Landoni JC [22]
Mcdonald JL [22]
Sarosiek KA [22]
Hakim P [22]
Qin X [22]
Ha LL [22]
Lugo CM [22]
Villa E [21]
Hurst M [20]
Makroczyova J [20]
Schoof M [20]
Ericson CF [20]
Afanasyev P [20]
Klumpe S [19]
Xu J [19]
Mahamid J [18]
Hummer G [17]
Klein S [16]
Li D [16]
Vale-costa S [15]
O'riain A [15]
Amorim MJ [15]
Khanna K [14]
Harper JW [14]
Bohnert M [14]
Gouaux E [14]
Walters KJ [13]
Chen X [13]
Kukulski W [13]
Pogliano K [13]
Kolovou A [13]
Kraus F [12]
Kim J [11]
Lolicato F [11]
Erdmann PS [11]
Wietrzynski W [11]
Nyman M [11]
Klena N [11]
Spangler CJ [11]
Li M [11]
Liu Q [10]
Brecht R [10]
Zhu X [10]
Schaffer M [10]
Gui M [10]
Fung HKH [10]
Lahr C [10]
Hosseinzadeh M [10]
Reddmann N [10]
Beyer D [10]
Schuller JM [10]
Elferich J [10]
Ma S [10]
Brenner J [10]
Muller CW [10]
Herrmann A [10]
Zagoriy I [10]
Li L [10]
Coscia F [9]
Vazzana R [9]
Vallbracht M [9]
Matos J [9]
Demulder M [9]
Beck M [9]
Kalebic N [9]
Silva M [9]
Perone G [9]
Sugie J [9]
Hugener J [9]
Nguyen HTD [9]
Bieber A [8]
Lizarrondo J [8]
Bartenschlager R [8]

Journal

NAT COMMUN [88]
CELL [65]
TO BE PUBLISHED [59]
BIORXIV [56]
ELIFE [52]
PNAS [40]
NAT MICROBIOL [31]
ISME J [25]
EMBO J [23]
DEV CELL [19]
NAT METHODS [19]
SCIENCE [17]
CELL HOST MICROBE [14]
STRUCTURE [13]
MOL CELL [12]
SCI ADV [12]
CELL REP [11]
NAT PLANTS [9]
J CELL BIOL [7]
J STRUCT BIOL [6]
NATURE [6]
PLOS BIOL [5]
COMMUN BIOL [4]
MBIO [4]
SCI REP [4]
CURR BIOL [3]
FRONT MICROBIOL [3]
NAT STRUCT MOL BIOL [3]
PLOS COMPUT BIOL [3]
ADV SCI [2]
INFECT.IMMUN. [2]
J CELL SCI [2]
NUCLEIC ACIDS RES [2]
ACTA CRYSTALLOGR D STRUCT BIOL [1]
BIOL IMAGING [1]
CELL MOL IMMUNOL [1]
CELL REP METHODS [1]
EMBO REP [1]
MICRO PUBL BIOL [1]
MICROSC MICROANAL [1]
MOL BIOL CELL [1]
NAT MATER [1]
NAT PROTOC [1]

Software

Microscope

Electron Source

Film or detector model

External links