Filter By
Current Database
- EMDB [39748]
Current status
- REL [39748]
Sample type
- Protein [39748]
- Complex [33611]
- Ligand [22039]
- RNA [4773]
- DNA [3643]
- Sample [2492]
- Virus [2036]
- Cellular component [1605]
- Cell [396]
- Tissue [240]
- Other [63]
Organism
- Homo sapiens [16357]
- Synthetic construct [3054]
- Mus musculus [2759]
- Escherichia coli [2384]
- Severe acute respiratory syndrome coronavirus [1980]
- Saccharomyces cerevisiae [1708]
- Rattus norvegicus [1097]
- Escherichia coli [905]
- Bos taurus [792]
- Human immunodeficiency virus 1 [737]
- Saccharomyces cerevisiae [709]
- Oryctolagus cuniculus [703]
- Lama glama [637]
- Sus scrofa [622]
- Arabidopsis thaliana [525]
- Xenopus laevis [465]
- Drosophila melanogaster [275]
- Mycolicibacterium smegmatis [257]
- Mycobacterium tuberculosis [224]
- Gallus gallus [217]
- Influenza a virus [206]
- Macaca mulatta [187]
- Vicugna pacos [180]
- Bacillus subtilis [175]
- Staphylococcus aureus [172]
- Danio rerio [168]
- Thermus thermophilus [156]
- Escherichia coli [155]
- Pseudomonas aeruginosa [154]
- Mycobacterium tuberculosis [137]
- Aequorea victoria [117]
- Chaetomium thermophilum [114]
- Chaetomium thermophilum [112]
- Enterobacteria phage t4 [107]
- Caenorhabditis elegans [104]
- Bacillus subtilis [102]
- Pseudomonas aeruginosa [101]
- Chlamydomonas reinhardtii [101]
- Salmonella enterica [94]
- Synechocystis sp. pcc 6803 [92]
- Streptococcus pyogenes [92]
- Ovis aries [88]
- Plasmodium falciparum [83]
- Mycolicibacterium smegmatis [81]
- Escherichia virus t7 [77]
- Plasmodium falciparum [74]
- Vibrio cholerae [73]
- Klebsiella pneumoniae [70]
- Thermus thermophilus [69]
- Clostridioides difficile [67]
- Salmonella enterica [67]
- Dna molecule [65]
- Schizosaccharomyces pombe [64]
- Hepatitis b virus [63]
- Severe acute respiratory syndrome coronavirus [63]
- Tetrahymena thermophila [63]
- Escherichia coli [62]
- Cricetulus griseus [61]
- Geobacillus stearothermophilus [60]
- Monkeypox virus [59]
- Spinacia oleracea [59]
- Polytomella sp. pringsheim 198.80 [58]
- Enterovirus d [58]
- Adeno-associated virus [57]
- Enterovirus a [55]
- Middle east respiratory syndrome-related coronavirus [54]
- Clostridium botulinum [54]
- Escherichia phage lambda [54]
- Amanita phalloides [54]
- Enterobacteria phage t4 [53]
- African swine fever virus [52]
- Dengue virus [51]
- Parengyodontium album [51]
- Legionella pneumophila [50]
- (no species) [49]
- Aquifex aeolicus [49]
- Saccharolobus solfataricus [49]
- Canis lupus [49]
- Acinetobacter baumannii [48]
- Schizosaccharomyces pombe [48]
- Human coronavirus hku1 [46]
- Human cytomegalovirus [45]
- Mycoplasma pneumoniae [45]
- Oryza sativa [44]
- Meiothermus taiwanensis [43]
- Epstein-barr virus (strain gd1) [41]
- Human immunodeficiency virus [41]
- Methanothermobacter marburgensis [41]
- Trypanosoma brucei [40]
- Spodoptera frugiperda [40]
- Potato virus y [39]
- Thermotoga maritima [39]
- Sus scrofa [39]
- Human herpesvirus 1 [38]
- Saccharomyces cerevisiae [38]
- Streptococcus pneumoniae [38]
- Methanococcus maripaludis [37]
- Escherichia coli [37]
- Streptococcus thermophilus [36]
- Severe acute respiratory syndrome coronavirus [36]
EM Method
- Single-particle [36594]
- Helical reconstruction [2280]
- Subtomogram averaging [634]
- Electron Crystallography [172]
- Tomography [68]
Resolution
- < 2Å [367]
- ≥ 2Å and < 3Å [10270]
- ≥ 3Å and < 4Å [19553]
- ≥ 4Å and < 5Å [4017]
- ≥ 5Å and < 6Å [753]
- ≥ 6Å and < 8Å [1469]
- ≥ 8Å and < 12Å [1119]
- ≥ 12Å and < 16Å [435]
- ≥ 16Å and < 20Å [398]
- ≥ 20Å and < 30Å [854]
- ≥ 30Å [361]
Model molecular weight
- 0-50 kDa [720]
- 50-100 kDa [2272]
- 100-250 kDa [10983]
- 250-500 kDa [8906]
- 500-1000 kDa [5111]
- 1-2 MDa [2381]
- 2-5 MDa [2290]
- 5-10 MDa [617]
- > 10 MDa [426]
Release Date
- 2026 [4577]
- 2025 [7748]
- 2024 [6355]
- 2023 [5051]
- 2022 [4336]
- 2021 [3180]
- 2020 [2547]
- 2019 [1520]
- 2018 [987]
- 2017 [627]
- 2016 [654]
- 2015 [472]
- 2014 [433]
- 2013 [352]
- 2012 [256]
- 2011 [138]
- 2010 [131]
- 2009 [111]
- 2008 [32]
- 2007 [67]
- 2006 [98]
- 2005 [21]
- 2004 [23]
- 2003 [32]
Author by name
- Zhang Y [1480]
- Wang Y [1390]
- Zhang X [1121]
- Wang X [1098]
- Li Y [1089]
- Wang J [1003]
- Li X [912]
- Li Z [867]
- Liu Y [862]
- Zhang Z [797]
- Gao Y [736]
- Zhang J [721]
- Wang L [716]
- Li J [706]
- Li S [691]
- Ward AB [682]
- Chen Y [656]
- Li H [649]
- Zhang L [643]
- Chen X [601]
- Zhang H [581]
- Liu C [578]
- Wang Q [555]
- Wang H [540]
- Li D [538]
- Liu Z [535]
- Zhang S [520]
- Chen Z [517]
- Liu S [517]
- Wang C [513]
- Liu J [512]
- Xu Y [499]
- Shi Y [482]
- Chen J [475]
- Liu X [459]
- Liu L [445]
- Jiang Y [443]
- Yang Y [441]
- Zhao Y [430]
- Wang S [426]
- Zhang K [426]
- Zhu Y [416]
- Wang Z [409]
- Huang Y [389]
- Zhao J [381]
- Yang X [379]
- Zhang C [378]
- Liu H [375]
- Wang F [373]
- Wang W [364]
- Zhou Y [353]
- Li W [351]
- Xu C [348]
- Zhang B [343]
- Wang M [342]
- Xu HE [340]
- Wang P [338]
- Zhang W [337]
- Xu J [333]
- Li M [326]
- Liu B [321]
- Cheng Y [320]
- Yu X [316]
- Yang H [313]
- Beckmann R [312]
- Zhou ZH [310]
- Rao Z [309]
- Chen Q [305]
- Wu Y [305]
- Zhou Q [303]
- Zhang M [302]
- Zhang Q [301]
- Cheng J [299]
- Sun Y [299]
- Yang J [299]
- Chen L [296]
- Zhao X [293]
- Yang F [292]
- Huang J [291]
- Wu J [291]
- Lu Y [288]
- Skiniotis G [288]
- Du J [284]
- Kotecha A [284]
- Nureki O [281]
- Sun L [280]
- Zhang P [280]
- Chen H [279]
- Li L [279]
- Kwong PD [271]
- He Y [270]
- Zhou J [268]
- Zhu X [267]
- Yang Z [263]
- Huang X [262]
- Sun J [262]
- Scheres SHW [259]
- Li F [253]
- Yu Z [251]
- Rubinstein JL [250]
Author by ORCID
- Ward AB [306]
- Kotecha A [282]
- Skiniotis G [267]
- Xu HE [246]
- Cheng Y [243]
- Kobilka BK [234]
- Kwong PD [217]
- Rubinstein JL [205]
- Raunser S [204]
- Li H [198]
- Subramaniam S [192]
- Gmeiner P [188]
- Baker D [187]
- Scheres SHW [184]
- Du J [184]
- Papasergi-scott MM [180]
- Gao Y [178]
- Nureki O [177]
- Gao GF [172]
- Cottrell CA [171]
- Zhang K [170]
- Plevka P [170]
- He F [169]
- Gao N [169]
- Zhou ZH [168]
- Hilger D [166]
- Beckmann R [166]
- Chiu W [163]
- Edwards RJ [161]
- Borgnia MJ [159]
- Batebi H [159]
- Panova O [159]
- Perez-hernandez G [159]
- Hildebrand PW [159]
- Henderson R [156]
- Lu W [155]
- Lander GC [155]
- Bai XC [154]
- Ranson NA [147]
- Sobolevsky AI [146]
- Crispin M [145]
- Fuzik T [142]
- Hummer G [141]
- Yamashita K [141]
- Stahlberg H [139]
- Chai P [137]
- Park YJ [137]
- Goedert M [131]
- Wang X [131]
- Greber BJ [130]
- Briggs JAG [130]
- Robinson CV [129]
- Kuhlbrandt W [126]
- Steyaert J [126]
- Yang D [125]
- Egelman EH [125]
- Zhang P [124]
- Xiong X [123]
- Rao Z [122]
- Veesler D [122]
- Zheng Q [121]
- Allen JD [121]
- King NP [120]
- Zhang Y [119]
- Novacek J [118]
- Lee SY [117]
- Huiskonen JT [115]
- Wang F [115]
- Cheng J [115]
- Leschziner AE [113]
- Venugopal H [112]
- Schoehn G [112]
- Shirouzu M [112]
- Korostelev AA [112]
- Wang MW [111]
- Yang M [111]
- Torres JL [111]
- He X [110]
- Acharya P [110]
- Zhao Y [110]
- Amunts A [110]
- Wilson DN [110]
- Yan C [109]
- Sachse C [109]
- Bottcher B [109]
- Cramer P [108]
- Kishikawa JI [108]
- Taylor DW [107]
- Kato T [107]
- Moeller A [107]
- Mclellan JS [106]
- Pardon E [105]
- Yang W [105]
- Qi J [105]
- Hite RK [104]
- Chipman P [104]
- Mills DJ [102]
- Klose T [101]
- Nogales E [100]
- Furukawa H [99]
Journal
- NAT COMMUN [7731]
- TO BE PUBLISHED [3807]
- NATURE [3482]
- NAT STRUCT MOL BIOL [2442]
- PNAS [2402]
- BIORXIV [1766]
- SCIENCE [1655]
- CELL [1491]
- SCI ADV [1445]
- MOL CELL [1284]
- ELIFE [1222]
- STRUCTURE [1071]
- CELL REP [828]
- NUCLEIC ACIDS RES [758]
- CELL RES [589]
- COMMUN BIOL [515]
- EMBO J [508]
- NAT CHEM BIOL [444]
- J MOL BIOL [420]
- J BIOL CHEM [413]
- CELL DISCOV [392]
- PLOS PATHOG [352]
- J VIROL [349]
- ACTA CRYSTALLOGR D STRUCT BIOL [279]
- NAT MICROBIOL [272]
- J STRUCT BIOL [167]
- SCI REP [167]
- NAT PLANTS [160]
- PROTEIN SCI [156]
- J AM CHEM SOC [153]
- PLOS BIOL [150]
- MBIO [149]
- CELL HOST MICROBE [146]
- IMMUNITY [146]
- PROTEIN CELL [117]
- NEURON [111]
- EMBO REP [108]
- VIRUSES [103]
- J MED CHEM [86]
- NAT METHODS [84]
- J CELL BIOL [82]
- LIFE SCI ALLIANCE [78]
- IUCRJ [77]
- ISCIENCE [74]
- BIOCHEMISTRY [72]
- COMMUN CHEM [72]
- PLOS ONE [66]
- ADV SCI [65]
- RES SQ [61]
- INT J MOL SCI [60]
- SCI TRANSL MED [60]
- ANGEW CHEM INT ED ENGL [54]
- PNAS NEXUS [54]
- SIGNAL TRANSDUCT TARGET THER [54]
- BIOCHEM BIOPHYS RES COMMUN [53]
- SCI IMMUNOL [51]
- INT J BIOL MACROMOL [49]
- J STRUCT BIOL X [48]
- ACTA NEUROPATHOL [47]
- BLOOD [46]
- NPJ VACCINES [43]
- PLANT CELL [39]
- NAT CATAL [38]
- DEV CELL [37]
- FEBS J [37]
- GENES DEV [33]
- BIOCHEM J [31]
- NAT CHEM [31]
- PLANT COMMUN. [31]
- MOL PLANT [29]
- CELL REP MED [28]
- FEBS LETT [28]
- ACS NANO [27]
- NAT NEUROSCI [27]
- RNA [26]
- NATL SCI REV [25]
- SCI SIGNAL [25]
- BIOCHIM BIOPHYS ACTA BIOENERG [23]
- EMERG MICROBES INFECT [23]
- J.MOL.CELL.CARDIOL. [23]
- J EXP MED [22]
- ACS CHEM BIOL [21]
- BIOMOLECULES [21]
- OPEN BIOL [21]
- ACTA PHARMACOL.SIN. [20]
- FRONT IMMUNOL [20]
- HLIFE [20]
- ACTA CRYSTALLOGR F STRUCT BIOL COMMUN [19]
- CELL CHEM BIOL [19]
- SCI BULL (BEIJING) [19]
- ACS CATAL [18]
- CURR BIOL [18]
- MICROBIOL SPECTR [18]
- NAT CELL BIOL [18]
- MOL MICROBIOL [17]
- NAT IMMUNOL [17]
- ACS CENT SCI [16]
- COMMUN MATER [16]
- MOL PHARMACOL [16]
- NAT NANOTECHNOL [16]
Software
- CRYOSPARC [11747]
- RELION [9809]
- CTFFIND [1403]
- GCTF [705]
- CISTEM [422]
- SPIDER [417]
- CHIMERA [390]
- COOT [310]
- FREALIGN [305]
- PHENIX [276]
- WARP [224]
- UCSF CHIMERAX [197]
- EMAN [185]
- EMAN2 [170]
- UCSF CHIMERA [148]
- IMOD [117]
- IMAGIC [116]
- SPHIRE [105]
- DYNAMO [90]
- JSPR [89]
- CRYOLO [88]
- AV3 [66]
- MATLAB [66]
- XMIPP [63]
- EMAN2, SPARX [61]
- TOM TOOLBOX [49]
- SPARX [48]
- AIMLESS [46]
- SITUS [46]
- IMAGIC, SPIDER [41]
- AUTO3DEM [38]
- SPIDER, FREALIGN [37]
- MDFF [33]
- TOM [33]
- APPION, SPIDER [32]
- SIMPLE [31]
- MRC [29]
- URO [29]
- ISOLDE [28]
- IHRSR [27]
- EMAN1 [26]
- NOVACTF [25]
- CHIMERA, SITUS [24]
- CTFPHASEFLIP [22]
- PYTOM [22]
- SPIDER, APPION [22]
- EMAN2, RELION [20]
- SUBTOM [20]
- SPRING [19]
- CHIMERA, MDFF [18]
- CTFFIND4 [18]
- EMAN1, EMAN2 [18]
- MOLREP [18]
- APPION, SPIDER, SPARX, EMAN2 [17]
- EMCLARITY [17]
- PEET [17]
- SPIDER, RELION [17]
- CHIMERA, COOT [16]
- CTFFIND3, RELION [16]
- O [16]
- POINTLESS [16]
- UNBLUR, CTFFIND4, FREALIGN [16]
- COMET [15]
- CTFFIND3 [15]
- FREALIX [15]
- CHIMERA, FLEX-EM [14]
- EMFIT [14]
- IMAGIC-5 [14]
- SCIPION [14]
- SPIDER, IMAGIC [14]
- BSOFT [13]
- DIREX [13]
- EMREADY [13]
- PHOELIX, SUPRIM [13]
- REFMAC [13]
- AMIRA [12]
- IMAGIC-5, SPIDER [12]
- IMOD, TOMO3D [12]
- PHOELIX [12]
- SPARX/EMAN2 [12]
- TOPAZ [12]
- EMAN, SPIDER [11]
- MPSA [11]
- SPIDER, EMAN [11]
- TOMO3D [11]
- APPION [10]
- EMAN, XMIPP [10]
- EMAN2, RELION, 1.3 [10]
- MOTIONCORR2 [10]
- PHASER [10]
- SPIDER, EMAN2 [10]
- SPIDER, IHRSR [10]
- EMAN1, FREALIGN [9]
- EMAN2/SPARX [9]
- FLEX-EM [9]
- FOCUS [9]
- GAP [9]
- MRC, IMAGIC, SPIDER [9]
- PROTOMO [9]
- SPIDER PACKAGE [9]
Microscope
- FEI TITAN KRIOS [21605]
- TFS KRIOS [9814]
- FEI TALOS ARCTICA [2039]
- TFS GLACIOS [1361]
- FEI TECNAI F20 [912]
- FEI POLARA 300 [794]
- JEOL CRYO ARM 300 [588]
- FEI TECNAI F30 [399]
- FEI TITAN [316]
- FEI TECNAI ARCTICA [294]
- FEI TECNAI SPIRIT [183]
- FEI TECNAI 12 [182]
- TFS TALOS [150]
- FEI TECNAI 20 [145]
- FEI/PHILIPS CM200FEG [135]
- JEOL 3200FSC [107]
- JEOL 2010F [70]
- JEOL CRYO ARM 200 [70]
- FEI/PHILIPS CM300FEG/T [45]
- JEOL 2200FS [43]
- JEOL 2100F [40]
- JEOL 1230 [37]
- FEI MORGAGNI [36]
- JEOL 2100 [29]
- JEOL 3200FS [27]
- FEI/PHILIPS CM120T [22]
- JEOL 4000EX [22]
- TFS TALOS L120C [22]
- JEOL 3000SFF [21]
- JEOL KYOTO-3000SFF [21]
- TFS TITAN THEMIS [21]
- JEOL 1200EXII [19]
- OTHER [19]
- FEI TECNAI 10 [15]
- FEI/PHILIPS CM200FEG/ST [15]
- FEI/PHILIPS EM420 [14]
- TFS TALOS F200C [14]
- FEI/PHILIPS CM300FEG/HE [13]
- JEOL 1200EX [13]
- JEOL 1400 [12]
- JEOL 1400/HR YPS FEG [11]
- FEI/PHILIPS CM200T [9]
- FEI/PHILIPS CM200FEG/UT [7]
- ZEISS LIBRA120PLUS [7]
- FEI/PHILIPS CM12 [6]
- JEOL 2000EX [6]
- JEOL 2200FSC [6]
- JEOL 100CX [5]
- JEOL 2010 [5]
- FEI TECNAI SPHERA [4]
- FEI/PHILIPS CM10 [3]
- FEI/PHILIPS CM300FEG/ST [3]
- HITACHI H-9500SD [3]
- JEOL 1010 [3]
- JEOL 3100FFC [3]
- TFS TUNDRA [3]
- JEOL 2010HC [2]
- JEOL 2010HT [2]
- JEOL 2010UHR [2]
- SHUIMU TOTEM 300S [2]
- HITACHI EF2000 [1]
- HITACHI H7600 [1]
- JEOL 1200 [1]
- JEOL 2000EXII [1]
- JEOL 2011 [1]
- ZEISS LEO912 [1]
Electron Source
- FIELD EMISSION GUN [38800]
- LAB6 [509]
- OTHER [285]
- TUNGSTEN HAIRPIN [155]
Film or detector model
- GATAN K3 6K X 4K [11442]
- GATAN K3 BIOQUANTUM 6K X 4K [7907]
- GATAN K2 SUMMIT 4K X 4K [7433]
- FEI FALCON IV 4K X 4K [4138]
- FEI FALCON III 4K X 4K [2113]
- GATAN K2 QUANTUM 4K X 4K [1360]
- TFS FALCON 4I 4K X 4K [932]
- FEI FALCON II 4K X 4K [913]
- KODAK SO-163 FILM [626]
- GATAN K3 BIOCONTINUUM 6K X 4K [518]
- GATAN ULTRASCAN 4000 4K X 4K [486]
- TVIPS TEMCAM-F416 4K X 4K [386]
- GATAN K2 4K X 4K [179]
- GATAN K2 BASE 4K X 4K [163]
- OTHER [124]
- FEI EAGLE 4K X 4K [110]
- TVIPS TEMCAM-F415 4K X 4K [105]
- GENERIC GATAN 4K X 4K [89]
- FEI CETA 4K X 4K [83]
- FEI FALCON I 4K X 4K [66]
- GENERIC CCD [65]
- DIRECT ELECTRON DE-20 5K X 3K [57]
- TVIPS TEMCAM-F816 8K X 8K [43]
- GENERIC GATAN [33]
- GENERIC TVIPS 4K X 4K [32]
- DIRECT ELECTRON DE-64 8K X 8K [30]
- DIRECT ELECTRON APOLLO 4K X 4K [27]
- GATAN MULTISCAN [26]
- GATAN K2 IS 4K X 4K [25]
- DIRECT ELECTRON DE-16 4K X 4K [24]
- FEI EAGLE 2K X 2K [23]
- GATAN ULTRASCAN 1000 2K X 2K [23]
- DIRECT ELECTRON DE-10 5K X 4K [21]
- DIRECT ELECTRON DE-12 4K X 3K [15]
- TVIPS TEMCAM-F224 2K X 2K [15]
- DECTRIS SINGLA 1K X 1K [12]
- KODAK 4489 FILM [10]
- AGFA SCIENTA FILM [9]
- GENERIC FILM [8]
- GENERIC GATAN 2K X 2K [8]
- GATAN ORIUS SC200 2K X 2K [5]
- GENERIC TVIPS [5]
- GATAN ULTRASCAN 10000 10K X 10K [3]
- GENERIC IMAGE PLATES [3]
- GENERIC TVIPS 2K X 2K [3]
- GATAN ORIUS SC600 2.7K X 2.7K [2]
- SIA 15C 3K X 3K [2]
- DECTRIS ARINA 0.2K X 0.2K [1]
- PROSCAN TEM-PIV 2K X 2K [1]
External links
- PDB [39485]
- UniProt [35565]
- PDBe-Kb [32945]
- AlphaFold DB [31960]
- InterPro [27718]
- Gene Ontology [26822]
- Pfam [24538]
- ChEBI [20492]
- ChEMBL [18517]
- DrugBank [16587]
- Complex Portal [9981]
- EMPIAR [3845]
- SCOP2 [658]
- CATH [428]
Resolution: 2.6 Å
EM Method: Single-particle
Fitted PDBs: 9n29
Q-score: 0.531
Devenish SO, Patel SD, Ussingkaer LV, Almeida Silva LF, Goff O, Richardson A, Mobbs JI, Venugopal H, Thal DM, Kullmann DM
Signal Transduct Target Ther (2026) 11 [ DOI: doi:10.1038/s41392-026-02865-4 Pubmed: 42393022 ]
Resolution: 2.36 Å
EM Method: Single-particle
Fitted PDBs: 9hig
Q-score: 0.561
Singh V, Godsora BKJ, Emmerich AG, Majumdar S, Sanyal S
To Be Published
Resolution: 3.6 Å
EM Method: Single-particle
Vega-Gutierrez C, Parraga-Picanol J, Sanchez-Valls I, Soto D, Herguedas B
To Be Published
Resolution: 4.44 Å
EM Method: Single-particle
Vega-Gutierrez C, Parraga-Picanol J, Sanchez-Valls I, Soto D, Herguedas B
To Be Published
Resolution: 2.64 Å
EM Method: Single-particle
Fitted PDBs: 9ru6
Q-score: 0.439
Singh V, Whitford PC, Khawaja A, Rorbach J
To Be Published
Resolution: 2.9 Å
EM Method: Single-particle
Fitted PDBs: 9ruf
Q-score: 0.469
Zampieri V, Priddey A, Kosmoliaptsis V, Marquez JA
To Be Published
Resolution: 2.74 Å
EM Method: Single-particle
Fitted PDBs: 9rug
Q-score: 0.487
Zampieri V, Priddey A, Linares R, Kosmoliaptsis V, Marquez JA
To Be Published
Resolution: 2.74 Å
EM Method: Single-particle
Fitted PDBs: 9ruh
Q-score: 0.522
Zampieri V, Priddey A, Kosmoliaptsis V, Marquez JA
To Be Published
Resolution: 3.56 Å
EM Method: Single-particle
Fitted PDBs: 9s0y
Q-score: 0.493
Stefanik Sobotkova A, Cienikova Z, Mironova Y, Fuzik T, Plevka P, Hlavenkova Z, Novacek J
To Be Published
Resolution: 3.5 Å
EM Method: Single-particle
Fitted PDBs: 9s5j
Q-score: 0.476
Stefanik Sobotkova A, Cienikova Z, Mironova Y, Fuzik T, Plevka P, Novacek J, Hlavenkova Z
To Be Published
Filter By
Current Database
- EMDB [39748]
Current status
- REL [39748]
Sample type
- Protein [39748]
- Complex [33611]
- Ligand [22039]
- RNA [4773]
- DNA [3643]
- Sample [2492]
- Virus [2036]
- Cellular component [1605]
- Cell [396]
- Tissue [240]
- Other [63]
Organism
- Homo sapiens [16357]
- Synthetic construct [3054]
- Mus musculus [2759]
- Escherichia coli [2384]
- Severe acute respiratory syndrome coronavirus [1980]
- Saccharomyces cerevisiae [1708]
- Rattus norvegicus [1097]
- Escherichia coli [905]
- Bos taurus [792]
- Human immunodeficiency virus 1 [737]
- Saccharomyces cerevisiae [709]
- Oryctolagus cuniculus [703]
- Lama glama [637]
- Sus scrofa [622]
- Arabidopsis thaliana [525]
- Xenopus laevis [465]
- Drosophila melanogaster [275]
- Mycolicibacterium smegmatis [257]
- Mycobacterium tuberculosis [224]
- Gallus gallus [217]
- Influenza a virus [206]
- Macaca mulatta [187]
- Vicugna pacos [180]
- Bacillus subtilis [175]
- Staphylococcus aureus [172]
- Danio rerio [168]
- Thermus thermophilus [156]
- Escherichia coli [155]
- Pseudomonas aeruginosa [154]
- Mycobacterium tuberculosis [137]
- Aequorea victoria [117]
- Chaetomium thermophilum [114]
- Chaetomium thermophilum [112]
- Enterobacteria phage t4 [107]
- Caenorhabditis elegans [104]
- Bacillus subtilis [102]
- Pseudomonas aeruginosa [101]
- Chlamydomonas reinhardtii [101]
- Salmonella enterica [94]
- Synechocystis sp. pcc 6803 [92]
- Streptococcus pyogenes [92]
- Ovis aries [88]
- Plasmodium falciparum [83]
- Mycolicibacterium smegmatis [81]
- Escherichia virus t7 [77]
- Plasmodium falciparum [74]
- Vibrio cholerae [73]
- Klebsiella pneumoniae [70]
- Thermus thermophilus [69]
- Clostridioides difficile [67]
- Salmonella enterica [67]
- Dna molecule [65]
- Schizosaccharomyces pombe [64]
- Hepatitis b virus [63]
- Severe acute respiratory syndrome coronavirus [63]
- Tetrahymena thermophila [63]
- Escherichia coli [62]
- Cricetulus griseus [61]
- Geobacillus stearothermophilus [60]
- Monkeypox virus [59]
- Spinacia oleracea [59]
- Polytomella sp. pringsheim 198.80 [58]
- Enterovirus d [58]
- Adeno-associated virus [57]
- Enterovirus a [55]
- Middle east respiratory syndrome-related coronavirus [54]
- Clostridium botulinum [54]
- Escherichia phage lambda [54]
- Amanita phalloides [54]
- Enterobacteria phage t4 [53]
- African swine fever virus [52]
- Dengue virus [51]
- Parengyodontium album [51]
- Legionella pneumophila [50]
- (no species) [49]
- Aquifex aeolicus [49]
- Saccharolobus solfataricus [49]
- Canis lupus [49]
- Acinetobacter baumannii [48]
- Schizosaccharomyces pombe [48]
- Human coronavirus hku1 [46]
- Human cytomegalovirus [45]
- Mycoplasma pneumoniae [45]
- Oryza sativa [44]
- Meiothermus taiwanensis [43]
- Epstein-barr virus (strain gd1) [41]
- Human immunodeficiency virus [41]
- Methanothermobacter marburgensis [41]
- Trypanosoma brucei [40]
- Spodoptera frugiperda [40]
- Potato virus y [39]
- Thermotoga maritima [39]
- Sus scrofa [39]
- Human herpesvirus 1 [38]
- Saccharomyces cerevisiae [38]
- Streptococcus pneumoniae [38]
- Methanococcus maripaludis [37]
- Escherichia coli [37]
- Streptococcus thermophilus [36]
- Severe acute respiratory syndrome coronavirus [36]
EM Method
- Single-particle [36594]
- Helical reconstruction [2280]
- Subtomogram averaging [634]
- Electron Crystallography [172]
- Tomography [68]
Resolution
- < 2Å [367]
- ≥ 2Å and < 3Å [10270]
- ≥ 3Å and < 4Å [19553]
- ≥ 4Å and < 5Å [4017]
- ≥ 5Å and < 6Å [753]
- ≥ 6Å and < 8Å [1469]
- ≥ 8Å and < 12Å [1119]
- ≥ 12Å and < 16Å [435]
- ≥ 16Å and < 20Å [398]
- ≥ 20Å and < 30Å [854]
- ≥ 30Å [361]
Model molecular weight
- 0-50 kDa [720]
- 50-100 kDa [2272]
- 100-250 kDa [10983]
- 250-500 kDa [8906]
- 500-1000 kDa [5111]
- 1-2 MDa [2381]
- 2-5 MDa [2290]
- 5-10 MDa [617]
- > 10 MDa [426]
Release Date
- 2026 [4577]
- 2025 [7748]
- 2024 [6355]
- 2023 [5051]
- 2022 [4336]
- 2021 [3180]
- 2020 [2547]
- 2019 [1520]
- 2018 [987]
- 2017 [627]
- 2016 [654]
- 2015 [472]
- 2014 [433]
- 2013 [352]
- 2012 [256]
- 2011 [138]
- 2010 [131]
- 2009 [111]
- 2008 [32]
- 2007 [67]
- 2006 [98]
- 2005 [21]
- 2004 [23]
- 2003 [32]
Author by name
- Zhang Y [1480]
- Wang Y [1390]
- Zhang X [1121]
- Wang X [1098]
- Li Y [1089]
- Wang J [1003]
- Li X [912]
- Li Z [867]
- Liu Y [862]
- Zhang Z [797]
- Gao Y [736]
- Zhang J [721]
- Wang L [716]
- Li J [706]
- Li S [691]
- Ward AB [682]
- Chen Y [656]
- Li H [649]
- Zhang L [643]
- Chen X [601]
- Zhang H [581]
- Liu C [578]
- Wang Q [555]
- Wang H [540]
- Li D [538]
- Liu Z [535]
- Zhang S [520]
- Chen Z [517]
- Liu S [517]
- Wang C [513]
- Liu J [512]
- Xu Y [499]
- Shi Y [482]
- Chen J [475]
- Liu X [459]
- Liu L [445]
- Jiang Y [443]
- Yang Y [441]
- Zhao Y [430]
- Wang S [426]
- Zhang K [426]
- Zhu Y [416]
- Wang Z [409]
- Huang Y [389]
- Zhao J [381]
- Yang X [379]
- Zhang C [378]
- Liu H [375]
- Wang F [373]
- Wang W [364]
- Zhou Y [353]
- Li W [351]
- Xu C [348]
- Zhang B [343]
- Wang M [342]
- Xu HE [340]
- Wang P [338]
- Zhang W [337]
- Xu J [333]
- Li M [326]
- Liu B [321]
- Cheng Y [320]
- Yu X [316]
- Yang H [313]
- Beckmann R [312]
- Zhou ZH [310]
- Rao Z [309]
- Chen Q [305]
- Wu Y [305]
- Zhou Q [303]
- Zhang M [302]
- Zhang Q [301]
- Cheng J [299]
- Sun Y [299]
- Yang J [299]
- Chen L [296]
- Zhao X [293]
- Yang F [292]
- Huang J [291]
- Wu J [291]
- Lu Y [288]
- Skiniotis G [288]
- Du J [284]
- Kotecha A [284]
- Nureki O [281]
- Sun L [280]
- Zhang P [280]
- Chen H [279]
- Li L [279]
- Kwong PD [271]
- He Y [270]
- Zhou J [268]
- Zhu X [267]
- Yang Z [263]
- Huang X [262]
- Sun J [262]
- Scheres SHW [259]
- Li F [253]
- Yu Z [251]
- Rubinstein JL [250]
Author by ORCID
- Ward AB [306]
- Kotecha A [282]
- Skiniotis G [267]
- Xu HE [246]
- Cheng Y [243]
- Kobilka BK [234]
- Kwong PD [217]
- Rubinstein JL [205]
- Raunser S [204]
- Li H [198]
- Subramaniam S [192]
- Gmeiner P [188]
- Baker D [187]
- Scheres SHW [184]
- Du J [184]
- Papasergi-scott MM [180]
- Gao Y [178]
- Nureki O [177]
- Gao GF [172]
- Cottrell CA [171]
- Zhang K [170]
- Plevka P [170]
- He F [169]
- Gao N [169]
- Zhou ZH [168]
- Hilger D [166]
- Beckmann R [166]
- Chiu W [163]
- Edwards RJ [161]
- Borgnia MJ [159]
- Batebi H [159]
- Panova O [159]
- Perez-hernandez G [159]
- Hildebrand PW [159]
- Henderson R [156]
- Lu W [155]
- Lander GC [155]
- Bai XC [154]
- Ranson NA [147]
- Sobolevsky AI [146]
- Crispin M [145]
- Fuzik T [142]
- Hummer G [141]
- Yamashita K [141]
- Stahlberg H [139]
- Chai P [137]
- Park YJ [137]
- Goedert M [131]
- Wang X [131]
- Greber BJ [130]
- Briggs JAG [130]
- Robinson CV [129]
- Kuhlbrandt W [126]
- Steyaert J [126]
- Yang D [125]
- Egelman EH [125]
- Zhang P [124]
- Xiong X [123]
- Rao Z [122]
- Veesler D [122]
- Zheng Q [121]
- Allen JD [121]
- King NP [120]
- Zhang Y [119]
- Novacek J [118]
- Lee SY [117]
- Huiskonen JT [115]
- Wang F [115]
- Cheng J [115]
- Leschziner AE [113]
- Venugopal H [112]
- Schoehn G [112]
- Shirouzu M [112]
- Korostelev AA [112]
- Wang MW [111]
- Yang M [111]
- Torres JL [111]
- He X [110]
- Acharya P [110]
- Zhao Y [110]
- Amunts A [110]
- Wilson DN [110]
- Yan C [109]
- Sachse C [109]
- Bottcher B [109]
- Cramer P [108]
- Kishikawa JI [108]
- Taylor DW [107]
- Kato T [107]
- Moeller A [107]
- Mclellan JS [106]
- Pardon E [105]
- Yang W [105]
- Qi J [105]
- Hite RK [104]
- Chipman P [104]
- Mills DJ [102]
- Klose T [101]
- Nogales E [100]
- Furukawa H [99]
Journal
- NAT COMMUN [7731]
- TO BE PUBLISHED [3807]
- NATURE [3482]
- NAT STRUCT MOL BIOL [2442]
- PNAS [2402]
- BIORXIV [1766]
- SCIENCE [1655]
- CELL [1491]
- SCI ADV [1445]
- MOL CELL [1284]
- ELIFE [1222]
- STRUCTURE [1071]
- CELL REP [828]
- NUCLEIC ACIDS RES [758]
- CELL RES [589]
- COMMUN BIOL [515]
- EMBO J [508]
- NAT CHEM BIOL [444]
- J MOL BIOL [420]
- J BIOL CHEM [413]
- CELL DISCOV [392]
- PLOS PATHOG [352]
- J VIROL [349]
- ACTA CRYSTALLOGR D STRUCT BIOL [279]
- NAT MICROBIOL [272]
- J STRUCT BIOL [167]
- SCI REP [167]
- NAT PLANTS [160]
- PROTEIN SCI [156]
- J AM CHEM SOC [153]
- PLOS BIOL [150]
- MBIO [149]
- CELL HOST MICROBE [146]
- IMMUNITY [146]
- PROTEIN CELL [117]
- NEURON [111]
- EMBO REP [108]
- VIRUSES [103]
- J MED CHEM [86]
- NAT METHODS [84]
- J CELL BIOL [82]
- LIFE SCI ALLIANCE [78]
- IUCRJ [77]
- ISCIENCE [74]
- BIOCHEMISTRY [72]
- COMMUN CHEM [72]
- PLOS ONE [66]
- ADV SCI [65]
- RES SQ [61]
- INT J MOL SCI [60]
- SCI TRANSL MED [60]
- ANGEW CHEM INT ED ENGL [54]
- PNAS NEXUS [54]
- SIGNAL TRANSDUCT TARGET THER [54]
- BIOCHEM BIOPHYS RES COMMUN [53]
- SCI IMMUNOL [51]
- INT J BIOL MACROMOL [49]
- J STRUCT BIOL X [48]
- ACTA NEUROPATHOL [47]
- BLOOD [46]
- NPJ VACCINES [43]
- PLANT CELL [39]
- NAT CATAL [38]
- DEV CELL [37]
- FEBS J [37]
- GENES DEV [33]
- BIOCHEM J [31]
- NAT CHEM [31]
- PLANT COMMUN. [31]
- MOL PLANT [29]
- CELL REP MED [28]
- FEBS LETT [28]
- ACS NANO [27]
- NAT NEUROSCI [27]
- RNA [26]
- NATL SCI REV [25]
- SCI SIGNAL [25]
- BIOCHIM BIOPHYS ACTA BIOENERG [23]
- EMERG MICROBES INFECT [23]
- J.MOL.CELL.CARDIOL. [23]
- J EXP MED [22]
- ACS CHEM BIOL [21]
- BIOMOLECULES [21]
- OPEN BIOL [21]
- ACTA PHARMACOL.SIN. [20]
- FRONT IMMUNOL [20]
- HLIFE [20]
- ACTA CRYSTALLOGR F STRUCT BIOL COMMUN [19]
- CELL CHEM BIOL [19]
- SCI BULL (BEIJING) [19]
- ACS CATAL [18]
- CURR BIOL [18]
- MICROBIOL SPECTR [18]
- NAT CELL BIOL [18]
- MOL MICROBIOL [17]
- NAT IMMUNOL [17]
- ACS CENT SCI [16]
- COMMUN MATER [16]
- MOL PHARMACOL [16]
- NAT NANOTECHNOL [16]
Software
- CRYOSPARC [11747]
- RELION [9809]
- CTFFIND [1403]
- GCTF [705]
- CISTEM [422]
- SPIDER [417]
- CHIMERA [390]
- COOT [310]
- FREALIGN [305]
- PHENIX [276]
- WARP [224]
- UCSF CHIMERAX [197]
- EMAN [185]
- EMAN2 [170]
- UCSF CHIMERA [148]
- IMOD [117]
- IMAGIC [116]
- SPHIRE [105]
- DYNAMO [90]
- JSPR [89]
- CRYOLO [88]
- AV3 [66]
- MATLAB [66]
- XMIPP [63]
- EMAN2, SPARX [61]
- TOM TOOLBOX [49]
- SPARX [48]
- AIMLESS [46]
- SITUS [46]
- IMAGIC, SPIDER [41]
- AUTO3DEM [38]
- SPIDER, FREALIGN [37]
- MDFF [33]
- TOM [33]
- APPION, SPIDER [32]
- SIMPLE [31]
- MRC [29]
- URO [29]
- ISOLDE [28]
- IHRSR [27]
- EMAN1 [26]
- NOVACTF [25]
- CHIMERA, SITUS [24]
- CTFPHASEFLIP [22]
- PYTOM [22]
- SPIDER, APPION [22]
- EMAN2, RELION [20]
- SUBTOM [20]
- SPRING [19]
- CHIMERA, MDFF [18]
- CTFFIND4 [18]
- EMAN1, EMAN2 [18]
- MOLREP [18]
- APPION, SPIDER, SPARX, EMAN2 [17]
- EMCLARITY [17]
- PEET [17]
- SPIDER, RELION [17]
- CHIMERA, COOT [16]
- CTFFIND3, RELION [16]
- O [16]
- POINTLESS [16]
- UNBLUR, CTFFIND4, FREALIGN [16]
- COMET [15]
- CTFFIND3 [15]
- FREALIX [15]
- CHIMERA, FLEX-EM [14]
- EMFIT [14]
- IMAGIC-5 [14]
- SCIPION [14]
- SPIDER, IMAGIC [14]
- BSOFT [13]
- DIREX [13]
- EMREADY [13]
- PHOELIX, SUPRIM [13]
- REFMAC [13]
- AMIRA [12]
- IMAGIC-5, SPIDER [12]
- IMOD, TOMO3D [12]
- PHOELIX [12]
- SPARX/EMAN2 [12]
- TOPAZ [12]
- EMAN, SPIDER [11]
- MPSA [11]
- SPIDER, EMAN [11]
- TOMO3D [11]
- APPION [10]
- EMAN, XMIPP [10]
- EMAN2, RELION, 1.3 [10]
- MOTIONCORR2 [10]
- PHASER [10]
- SPIDER, EMAN2 [10]
- SPIDER, IHRSR [10]
- EMAN1, FREALIGN [9]
- EMAN2/SPARX [9]
- FLEX-EM [9]
- FOCUS [9]
- GAP [9]
- MRC, IMAGIC, SPIDER [9]
- PROTOMO [9]
- SPIDER PACKAGE [9]
Microscope
- FEI TITAN KRIOS [21605]
- TFS KRIOS [9814]
- FEI TALOS ARCTICA [2039]
- TFS GLACIOS [1361]
- FEI TECNAI F20 [912]
- FEI POLARA 300 [794]
- JEOL CRYO ARM 300 [588]
- FEI TECNAI F30 [399]
- FEI TITAN [316]
- FEI TECNAI ARCTICA [294]
- FEI TECNAI SPIRIT [183]
- FEI TECNAI 12 [182]
- TFS TALOS [150]
- FEI TECNAI 20 [145]
- FEI/PHILIPS CM200FEG [135]
- JEOL 3200FSC [107]
- JEOL 2010F [70]
- JEOL CRYO ARM 200 [70]
- FEI/PHILIPS CM300FEG/T [45]
- JEOL 2200FS [43]
- JEOL 2100F [40]
- JEOL 1230 [37]
- FEI MORGAGNI [36]
- JEOL 2100 [29]
- JEOL 3200FS [27]
- FEI/PHILIPS CM120T [22]
- JEOL 4000EX [22]
- TFS TALOS L120C [22]
- JEOL 3000SFF [21]
- JEOL KYOTO-3000SFF [21]
- TFS TITAN THEMIS [21]
- JEOL 1200EXII [19]
- OTHER [19]
- FEI TECNAI 10 [15]
- FEI/PHILIPS CM200FEG/ST [15]
- FEI/PHILIPS EM420 [14]
- TFS TALOS F200C [14]
- FEI/PHILIPS CM300FEG/HE [13]
- JEOL 1200EX [13]
- JEOL 1400 [12]
- JEOL 1400/HR YPS FEG [11]
- FEI/PHILIPS CM200T [9]
- FEI/PHILIPS CM200FEG/UT [7]
- ZEISS LIBRA120PLUS [7]
- FEI/PHILIPS CM12 [6]
- JEOL 2000EX [6]
- JEOL 2200FSC [6]
- JEOL 100CX [5]
- JEOL 2010 [5]
- FEI TECNAI SPHERA [4]
- FEI/PHILIPS CM10 [3]
- FEI/PHILIPS CM300FEG/ST [3]
- HITACHI H-9500SD [3]
- JEOL 1010 [3]
- JEOL 3100FFC [3]
- TFS TUNDRA [3]
- JEOL 2010HC [2]
- JEOL 2010HT [2]
- JEOL 2010UHR [2]
- SHUIMU TOTEM 300S [2]
- HITACHI EF2000 [1]
- HITACHI H7600 [1]
- JEOL 1200 [1]
- JEOL 2000EXII [1]
- JEOL 2011 [1]
- ZEISS LEO912 [1]
Electron Source
- FIELD EMISSION GUN [38800]
- LAB6 [509]
- OTHER [285]
- TUNGSTEN HAIRPIN [155]
Film or detector model
- GATAN K3 6K X 4K [11442]
- GATAN K3 BIOQUANTUM 6K X 4K [7907]
- GATAN K2 SUMMIT 4K X 4K [7433]
- FEI FALCON IV 4K X 4K [4138]
- FEI FALCON III 4K X 4K [2113]
- GATAN K2 QUANTUM 4K X 4K [1360]
- TFS FALCON 4I 4K X 4K [932]
- FEI FALCON II 4K X 4K [913]
- KODAK SO-163 FILM [626]
- GATAN K3 BIOCONTINUUM 6K X 4K [518]
- GATAN ULTRASCAN 4000 4K X 4K [486]
- TVIPS TEMCAM-F416 4K X 4K [386]
- GATAN K2 4K X 4K [179]
- GATAN K2 BASE 4K X 4K [163]
- OTHER [124]
- FEI EAGLE 4K X 4K [110]
- TVIPS TEMCAM-F415 4K X 4K [105]
- GENERIC GATAN 4K X 4K [89]
- FEI CETA 4K X 4K [83]
- FEI FALCON I 4K X 4K [66]
- GENERIC CCD [65]
- DIRECT ELECTRON DE-20 5K X 3K [57]
- TVIPS TEMCAM-F816 8K X 8K [43]
- GENERIC GATAN [33]
- GENERIC TVIPS 4K X 4K [32]
- DIRECT ELECTRON DE-64 8K X 8K [30]
- DIRECT ELECTRON APOLLO 4K X 4K [27]
- GATAN MULTISCAN [26]
- GATAN K2 IS 4K X 4K [25]
- DIRECT ELECTRON DE-16 4K X 4K [24]
- FEI EAGLE 2K X 2K [23]
- GATAN ULTRASCAN 1000 2K X 2K [23]
- DIRECT ELECTRON DE-10 5K X 4K [21]
- DIRECT ELECTRON DE-12 4K X 3K [15]
- TVIPS TEMCAM-F224 2K X 2K [15]
- DECTRIS SINGLA 1K X 1K [12]
- KODAK 4489 FILM [10]
- AGFA SCIENTA FILM [9]
- GENERIC FILM [8]
- GENERIC GATAN 2K X 2K [8]
- GATAN ORIUS SC200 2K X 2K [5]
- GENERIC TVIPS [5]
- GATAN ULTRASCAN 10000 10K X 10K [3]
- GENERIC IMAGE PLATES [3]
- GENERIC TVIPS 2K X 2K [3]
- GATAN ORIUS SC600 2.7K X 2.7K [2]
- SIA 15C 3K X 3K [2]
- DECTRIS ARINA 0.2K X 0.2K [1]
- PROSCAN TEM-PIV 2K X 2K [1]
External links
- PDB [39485]
- UniProt [35565]
- PDBe-Kb [32945]
- AlphaFold DB [31960]
- InterPro [27718]
- Gene Ontology [26822]
- Pfam [24538]
- ChEBI [20492]
- ChEMBL [18517]
- DrugBank [16587]
- Complex Portal [9981]
- EMPIAR [3845]
- SCOP2 [658]
- CATH [428]
