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sample_name:"dGTP triphosphohydrolase"

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Current Database

  • EMDB [7]

Current status

  • REL [7]

Sample type

  • Complex [7]
  • Protein [7]
  • Ligand [6]

Organism

  • Leeuwenhoekiella blandensis [4]
  • Escherichia virus t7 [3]
  • Escherichia coli [3]

EM Method

  • Single-particle [7]

Resolution

  • ≥ 2Å and < 3Å [6]
  • ≥ 3Å and < 4Å [1]

Model molecular weight

  • 250-500 kDa [7]

Release Date

  • 2022 [7]

Author by name

  • Borgnia MJ [7]
  • Hsu AL [7]
  • Klemm BP [7]
  • Schaaper RM [7]
  • Hall TMT [4]
  • Horng JC [4]
  • Sikkema AP [4]
  • Dillard LB [3]
  • Krahn JM [3]
  • London RE [3]
  • Mueller GA [3]
  • Singh D [3]
  • Smith CE [3]

Author by ORCID

  • Borgnia MJ [7]
  • Hsu AL [7]
  • Klemm BP [7]
  • Hall TMT [4]
  • Sikkema AP [4]
  • Mueller GA [3]
  • Krahn JM [3]
  • Schaaper RM [3]

Journal

  • J BIOL CHEM [4]
  • PNAS [3]

Software

  • RELION [7]

Microscope

  • FEI TALOS ARCTICA [6]
  • FEI TITAN KRIOS [1]

Electron Source

  • FIELD EMISSION GUN [7]

Film or detector model

  • GATAN K2 SUMMIT 4K X 4K [7]

External links

  • AlphaFold DB [7]
  • Gene Ontology [7]
  • InterPro [7]
  • PDB [7]
  • PDBe-Kb [7]
  • Pfam [7]
  • UniProt [7]
  • ChEBI [6]
  • ChEMBL [6]
  • DrugBank [6]
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EMD-26360
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Structure of E. coli dGTPase bound to T7 bacteriophage protein Gp1.2
Release date: Aug. 31, 2022
Resolution: 2.8 Å
EM Method: Single-particle
Fitted PDBs: 7u65
Q-score: 0.551

Klemm BP, Singh D, Smith CE, Hsu AL, Dillard LB, Krahn JM, London RE, Mueller GA, Borgnia MJ, Schaaper RM

PNAS (2022) 119 pp. e2123092119-e2123092119 [ Pubmed: 36067314 DOI: doi:10.1073/pnas.2123092119 ]

EMD-26361
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3D View
Structure of E. coli dGTPase bound to T7 bacteriophage protein Gp1.2 and dGTP
Release date: Aug. 31, 2022
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 7u66
Q-score: 0.539

Klemm BP, Singh D, Smith CE, Hsu AL, Dillard LB, Krahn JM, London RE, Mueller GA, Borgnia MJ, Schaaper RM

PNAS (2022) 119 pp. e2123092119-e2123092119 [ Pubmed: 36067314 DOI: doi:10.1073/pnas.2123092119 ]

EMD-26362
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3D View
Structure of E. coli dGTPase bound to T7 bacteriophage protein Gp1.2 and GTP
Release date: Aug. 31, 2022
Resolution: 2.5 Å
EM Method: Single-particle
Fitted PDBs: 7u67
Q-score: 0.588

Klemm BP, Singh D, Smith CE, Hsu AL, Dillard LB, Krahn JM, London RE, Mueller GA, Borgnia MJ, Schaaper RM

PNAS (2022) 119 pp. e2123092119-e2123092119 [ Pubmed: 36067314 DOI: doi:10.1073/pnas.2123092119 ]

EMD-26126
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3D View
Structure of the L. blandensis dGTPase in the apo form
Release date: June 1, 2022
Resolution: 2.1 Å
EM Method: Single-particle
Fitted PDBs: 7tu5
Q-score: 0.651

Klemm BP, Sikkema AP, Hsu AL, Horng JC, Hall TMT, Borgnia MJ, Schaaper RM

J Biol Chem (2022) 298 pp. 102073-102073 [ DOI: doi:10.1016/j.jbc.2022.102073 Pubmed: 35643313 ]

EMD-26127
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Structure of the L. blandensis dGTPase bound to dATP
Release date: June 1, 2022
Resolution: 2.7 Å
EM Method: Single-particle
Fitted PDBs: 7tu6
Q-score: 0.556

Klemm BP, Sikkema AP, Hsu AL, Horng JC, Hall TMT, Borgnia MJ, Schaaper RM

J Biol Chem (2022) 298 pp. 102073-102073 [ DOI: doi:10.1016/j.jbc.2022.102073 Pubmed: 35643313 ]

EMD-26128
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3D View
Structure of the L. blandensis dGTPase H125A mutant bound to dGTP
Release date: June 1, 2022
Resolution: 2.5 Å
EM Method: Single-particle
Fitted PDBs: 7tu7
Q-score: 0.637

Klemm BP, Sikkema AP, Hsu AL, Horng JC, Hall TMT, Borgnia MJ, Schaaper RM

J Biol Chem (2022) 298 pp. 102073-102073 [ DOI: doi:10.1016/j.jbc.2022.102073 Pubmed: 35643313 ]

EMD-26129
Download Map
3D View
Structure of the L. blandensis dGTPase H125A mutant bound to dGTP and dATP
Release date: June 1, 2022
Resolution: 2.6 Å
EM Method: Single-particle
Fitted PDBs: 7tu8
Q-score: 0.623

Klemm BP, Sikkema AP, Hsu AL, Horng JC, Hall TMT, Borgnia MJ, Schaaper RM

J Biol Chem (2022) 298 pp. 102073-102073 [ DOI: doi:10.1016/j.jbc.2022.102073 Pubmed: 35643313 ]

Sort by: Download
Showing 1 - 7 of 7. Page 1 of 1
Display:
Statistics
×

Download











































Preview first 10
Download

Filter By

Current Database

  • EMDB [7]

Current status

  • REL [7]

Sample type

  • Complex [7]
  • Protein [7]
  • Ligand [6]

Organism

  • Leeuwenhoekiella blandensis [4]
  • Escherichia virus t7 [3]
  • Escherichia coli [3]

EM Method

  • Single-particle [7]

Resolution

  • ≥ 2Å and < 3Å [6]
  • ≥ 3Å and < 4Å [1]

Model molecular weight

  • 250-500 kDa [7]

Release Date

  • 2022 [7]

Author by name

  • Borgnia MJ [7]
  • Hsu AL [7]
  • Klemm BP [7]
  • Schaaper RM [7]
  • Hall TMT [4]
  • Horng JC [4]
  • Sikkema AP [4]
  • Dillard LB [3]
  • Krahn JM [3]
  • London RE [3]
  • Mueller GA [3]
  • Singh D [3]
  • Smith CE [3]

Author by ORCID

  • Borgnia MJ [7]
  • Hsu AL [7]
  • Klemm BP [7]
  • Hall TMT [4]
  • Sikkema AP [4]
  • Mueller GA [3]
  • Krahn JM [3]
  • Schaaper RM [3]

Journal

  • J BIOL CHEM [4]
  • PNAS [3]

Software

  • RELION [7]

Microscope

  • FEI TALOS ARCTICA [6]
  • FEI TITAN KRIOS [1]

Electron Source

  • FIELD EMISSION GUN [7]

Film or detector model

  • GATAN K2 SUMMIT 4K X 4K [7]

External links

  • AlphaFold DB [7]
  • Gene Ontology [7]
  • InterPro [7]
  • PDB [7]
  • PDBe-Kb [7]
  • Pfam [7]
  • UniProt [7]
  • ChEBI [6]
  • ChEMBL [6]
  • DrugBank [6]