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sample_name:"The Rpd3S complex"

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Current Database

  • EMDB [10]

Current status

  • REL [10]

Sample type

  • Complex [10]
  • Ligand [4]
  • Protein [4]
  • DNA [3]

Organism

  • Saccharomyces cerevisiae [10]
  • Homo sapiens [3]

EM Method

  • Single-particle [10]

Resolution

  • ≥ 2Å and < 3Å [3]
  • ≥ 3Å and < 4Å [6]
  • ≥ 4Å and < 5Å [1]

Model molecular weight

  • 250-500 kDa [1]
  • 500-1000 kDa [3]

Release Date

  • 2024 [10]

Author by name

  • Chu C [10]
  • Guo Z [10]
  • Wang C [10]
  • Zhan X [10]

Author by ORCID

  • Chu C [10]
  • Wang C [10]
  • Guo Z [10]
  • Zhan X [10]

Journal

  • SCI ADV [10]

Microscope

  • FEI TITAN KRIOS [10]

Electron Source

  • FIELD EMISSION GUN [10]

Film or detector model

  • GATAN K3 6K X 4K [10]

External links

  • AlphaFold DB [4]
  • ChEBI [4]
  • ChEMBL [4]
  • Complex Portal [4]
  • DrugBank [4]
  • Gene Ontology [4]
  • InterPro [4]
  • PDB [4]
  • PDBe-Kb [4]
  • Pfam [4]
  • UniProt [4]
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EMD-37364
Download Map
3D View
Cryo-EM structure of the Rpd3S complex from budding yeast
Release date: May 15, 2024
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 8w9c
Q-score: 0.423

Wang C, Chu C, Guo Z, Zhan X

Sci Adv (2024) 10 pp. eadk7678-eadk7678 [ Pubmed: 38598631 DOI: doi:10.1126/sciadv.adk7678 ]

EMD-37365
Download Map
3D View
Cryo-EM structure of the Rpd3S-nucleosome complex from budding yeast in State 1
Release date: May 15, 2024
Resolution: 3.9 Å
EM Method: Single-particle
Fitted PDBs: 8w9d
Q-score: 0.263

Wang C, Chu C, Guo Z, Zhan X

Sci Adv (2024) 10 pp. eadk7678-eadk7678 [ Pubmed: 38598631 DOI: doi:10.1126/sciadv.adk7678 ]

EMD-37366
Download Map
3D View
Cryo-EM structure of the Rpd3S-nucleosome complex from budding yeast in State 2
Release date: May 15, 2024
Resolution: 3.6 Å
EM Method: Single-particle
Fitted PDBs: 8w9e
Q-score: 0.188

Wang C, Chu C, Guo Z, Zhan X

Sci Adv (2024) 10 pp. eadk7678-eadk7678 [ Pubmed: 38598631 DOI: doi:10.1126/sciadv.adk7678 ]

EMD-37367
Download Map
3D View
Cryo-EM structure of the Rpd3S-nucleosome complex from budding yeast in State 3
Release date: May 15, 2024
Resolution: 4.4 Å
EM Method: Single-particle
Fitted PDBs: 8w9f
Q-score: 0.156

Wang C, Chu C, Guo Z, Zhan X

Sci Adv (2024) 10 pp. eadk7678-eadk7678 [ Pubmed: 38598631 DOI: doi:10.1126/sciadv.adk7678 ]

EMD-37368
Download Map
3D View
Cryo-EM map of the Rpd3S region of Rpd3S-nucleosome complex in State1
Release date: May 8, 2024
Resolution: 2.9 Å
EM Method: Single-particle

Wang C, Chu C, Guo Z, Zhan X

Sci Adv (2024) 10 pp. eadk7678-eadk7678 [ Pubmed: 38598631 DOI: doi:10.1126/sciadv.adk7678 ]

EMD-37369
Download Map
3D View
Cryo-EM map of the nucleosome region of Rpd3S-nucleosome complex in State 1
Release date: May 8, 2024
Resolution: 2.9 Å
EM Method: Single-particle

Wang C, Chu C, Guo Z, Zhan X

Sci Adv (2024) 10 pp. eadk7678-eadk7678 [ Pubmed: 38598631 DOI: doi:10.1126/sciadv.adk7678 ]

EMD-37370
Download Map
3D View
Cryo-EM map of the Rpd3S region of Rpd3S-Nulceosome complex in State 2
Release date: May 8, 2024
Resolution: 3.6 Å
EM Method: Single-particle

Wang C, Chu C, Guo Z, Zhan X

Sci Adv (2024) 10 pp. eadk7678-eadk7678 [ Pubmed: 38598631 DOI: doi:10.1126/sciadv.adk7678 ]

EMD-37371
Download Map
3D View
Cryo-EM map of the nucleosome region of Rpd3S-nucleosome complex in State 2
Release date: May 8, 2024
Resolution: 2.9 Å
EM Method: Single-particle

Wang C, Chu C, Guo Z, Zhan X

Sci Adv (2024) 10 pp. eadk7678-eadk7678 [ Pubmed: 38598631 DOI: doi:10.1126/sciadv.adk7678 ]

EMD-37372
Download Map
3D View
Cryo-EM map of the Rpd3S region of Rpd3S-nucleosome complex in State 3
Release date: May 8, 2024
Resolution: 3.9 Å
EM Method: Single-particle

Wang C, Chu C, Guo Z, Zhan X

Sci Adv (2024) 10 pp. eadk7678-eadk7678 [ Pubmed: 38598631 DOI: doi:10.1126/sciadv.adk7678 ]

EMD-37373
Download Map
3D View
Cryo-EM map of the nucleosome region of Rpd3S-nucleosome complex in State 3
Release date: May 8, 2024
Resolution: 3.2 Å
EM Method: Single-particle

Wang C, Chu C, Guo Z, Zhan X

Sci Adv (2024) 10 pp. eadk7678-eadk7678 [ Pubmed: 38598631 DOI: doi:10.1126/sciadv.adk7678 ]

Sort by: Download
Showing 1 - 10 of 10. Page 1 of 1
Display:
Statistics
×

Download











































Preview first 10
Download

Filter By

Current Database

  • EMDB [10]

Current status

  • REL [10]

Sample type

  • Complex [10]
  • Ligand [4]
  • Protein [4]
  • DNA [3]

Organism

  • Saccharomyces cerevisiae [10]
  • Homo sapiens [3]

EM Method

  • Single-particle [10]

Resolution

  • ≥ 2Å and < 3Å [3]
  • ≥ 3Å and < 4Å [6]
  • ≥ 4Å and < 5Å [1]

Model molecular weight

  • 250-500 kDa [1]
  • 500-1000 kDa [3]

Release Date

  • 2024 [10]

Author by name

  • Chu C [10]
  • Guo Z [10]
  • Wang C [10]
  • Zhan X [10]

Author by ORCID

  • Chu C [10]
  • Wang C [10]
  • Guo Z [10]
  • Zhan X [10]

Journal

  • SCI ADV [10]

Microscope

  • FEI TITAN KRIOS [10]

Electron Source

  • FIELD EMISSION GUN [10]

Film or detector model

  • GATAN K3 6K X 4K [10]

External links

  • AlphaFold DB [4]
  • ChEBI [4]
  • ChEMBL [4]
  • Complex Portal [4]
  • DrugBank [4]
  • Gene Ontology [4]
  • InterPro [4]
  • PDB [4]
  • PDBe-Kb [4]
  • Pfam [4]
  • UniProt [4]