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sample_name:"Partial yeast 48S preinitiation complex"

Filter By

Current Database

  • EMDB [10]

Current status

  • REL [10]

Sample type

  • Complex [10]
  • Protein [7]
  • RNA [7]
  • Ligand [4]
  • Sample [3]
  • Cellular component [1]

Organism

  • Kluyveromyces lactis [7]
  • Saccharomyces cerevisiae [5]
  • Kluyveromyces lactis [4]
  • Saccharomyces cerevisiae [3]

EM Method

  • Single-particle [10]

Resolution

  • ≥ 3Å and < 4Å [5]
  • ≥ 4Å and < 5Å [2]
  • ≥ 5Å and < 6Å [2]
  • ≥ 6Å and < 8Å [1]

Model molecular weight

  • 1-2 MDa [7]

Release Date

  • 2019 [2]
  • 2018 [5]
  • 2015 [2]
  • 2014 [1]

Author by name

  • Hinnebusch AG [10]
  • Hussain T [10]
  • Llacer JL [10]
  • Lorsch JR [8]
  • Ramakrishnan V [8]
  • Gordiyenko Y [7]
  • Kaur S [5]
  • Kumar R [5]
  • Nanda JD [5]
  • Saini AK [5]
  • Aitken CE [2]
  • Dong J [2]
  • Marler L [2]
  • Thakur A [2]
  • Villamayor L [2]
  • Fernandez IS [1]
  • Martin-marcos P [1]
  • Munoz A [1]
  • Savva CG [1]

Author by ORCID

  • Llacer JL [10]
  • Hussain T [10]
  • Nanda JD [5]
  • Lorsch JR [5]
  • Ramakrishnan V [5]
  • Saini AK [5]
  • Kaur S [5]
  • Ramakrishnan V [3]
  • Hinnebusch AG [2]
  • Aitken CE [2]
  • Fernandez IS [1]

Journal

  • ELIFE [5]
  • MOL CELL [4]
  • NUCLEIC ACIDS RES [2]
  • CELL [1]

Software

  • RELION [10]
  • GCTF [4]
  • CHIMERA, COOT, REFMAC [2]
  • CHIMERA, REFMAC [1]

Microscope

  • FEI POLARA 300 [6]
  • FEI TITAN KRIOS [4]

Electron Source

  • FIELD EMISSION GUN [10]

Film or detector model

  • FEI FALCON III 4K X 4K [6]
  • FEI FALCON II 4K X 4K [4]

External links

  • AlphaFold DB [7]
  • PDB [7]
  • PDBe-Kb [7]
  • UniProt [7]
  • ChEBI [4]
  • ChEMBL [4]
  • DrugBank [4]
  • Gene Ontology [4]
  • InterPro [4]
  • Pfam [4]
  • SCOP2 [2]
  • Complex Portal [1]
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EMD-0057
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3D View
Cryo-EM structure of a partial yeast 48S preinitiation complex in its open conformation.
Release date: July 31, 2019
Resolution: 5.15 Å
EM Method: Single-particle
Fitted PDBs: 6gsm
Q-score: 0.197

Llacer JL, Hussain T, Dong J, Villamayor L, Gordiyenko Y, Hinnebusch AG

Nucleic Acids Res (2021) [ DOI: doi:10.1093/nar/gkab908 Pubmed: 34648019 ]

EMD-0058
Download Map
3D View
Cryo-EM map of a partial yeast 48S preinitiation complex in its closed conformation obtained by focused classification using masks for eIF3b-eIF3i.
Release date: June 26, 2019
Resolution: 5.75 Å
EM Method: Single-particle
Fitted PDBs: 6gsn
Q-score: 0.185

Llacer JL, Hussain T, Dong J, Villamayor L, Gordiyenko Y, Hinnebusch AG

Nucleic Acids Res (2021) [ DOI: doi:10.1093/nar/gkab908 Pubmed: 34648019 ]

EMD-4327
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3D View
Structure of a partial yeast 48S preinitiation complex with eIF5 N-terminal domain Map C1
Release date: Dec. 5, 2018
Resolution: 3.5 Å
EM Method: Single-particle
Fitted PDBs: 6fyx
Q-score: 0.314

Llacer JL, Hussain T, Saini AK, Nanda JD, Kaur S, Gordiyenko Y, Kumar R, Hinnebusch AG, Lorsch JR, Ramakrishnan V

eLife (2018) 7 [ Pubmed: 30475211 DOI: doi:10.7554/eLife.39273 ]

EMD-4328
Download Map
3D View
Structure of a partial yeast 48S preinitiation complex with eIF5 N-terminal domain Map 1
Release date: Dec. 5, 2018
Resolution: 3.02 Å
EM Method: Single-particle
Fitted PDBs: 6fyy
Q-score: 0.378

Llacer JL, Hussain T, Saini AK, Nanda JD, Kaur S, Gordiyenko Y, Kumar R, Hinnebusch AG, Lorsch JR, Ramakrishnan V

eLife (2018) 7 [ Pubmed: 30475211 DOI: doi:10.7554/eLife.39273 ]

EMD-4329
Download Map
3D View
Structure of a partial yeast 48S preinitiation complex with eIF5 N-terminal domain Map C2
Release date: Dec. 5, 2018
Resolution: 3.1 Å
EM Method: Single-particle

Llacer JL, Hussain T, Saini AK, Nanda JD, Kaur S, Gordiyenko Y, Kumar R, Hinnebusch AG, Lorsch JR, Ramakrishnan V

eLife (2018) 7 [ Pubmed: 30475211 DOI: doi:10.7554/eLife.39273 ]

EMD-4330
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3D View
Structure of a partial yeast 48S preinitiation complex with eIF5 N-terminal domain Map A
Release date: Dec. 5, 2018
Resolution: 3.53 Å
EM Method: Single-particle

Llacer JL, Hussain T, Saini AK, Nanda JD, Kaur S, Gordiyenko Y, Kumar R, Hinnebusch AG, Lorsch JR, Ramakrishnan V

eLife (2018) 7 [ Pubmed: 30475211 DOI: doi:10.7554/eLife.39273 ]

EMD-4331
Download Map
3D View
Structure of a partial yeast 48S preinitiation complex with eIF5 N-terminal domain Map B
Release date: Dec. 5, 2018
Resolution: 3.5 Å
EM Method: Single-particle

Llacer JL, Hussain T, Saini AK, Nanda JD, Kaur S, Gordiyenko Y, Kumar R, Hinnebusch AG, Lorsch JR, Ramakrishnan V

eLife (2018) 7 [ Pubmed: 30475211 DOI: doi:10.7554/eLife.39273 ]

EMD-3048
Download Map
3D View
Structure of a partial yeast 48S preinitiation complex in closed conformation
Release date: Aug. 5, 2015
Resolution: 4.9 Å
EM Method: Single-particle
Fitted PDBs: 3jap
Q-score: 0.244

Llacer JL, Hussain T, Marler L, Aitken CE, Thakur A, Lorsch JR, Hinnebusch AG, Ramakrishnan V

Mol Cell (2015) 59 pp. 399-412 [ Pubmed: 26212456 DOI: doi:10.1016/j.molcel.2015.06.033 ]

EMD-3049
Download Map
3D View
Structure of a partial yeast 48S preinitiation complex in open conformation
Release date: Aug. 5, 2015
Resolution: 6.0 Å
EM Method: Single-particle
Fitted PDBs: 3jaq

Llacer JL, Hussain T, Marler L, Aitken CE, Thakur A, Lorsch JR, Hinnebusch AG, Ramakrishnan V

Mol Cell (2015) 59 pp. 399-412 [ Pubmed: 26212456 DOI: doi:10.1016/j.molcel.2015.06.033 ]

EMD-2763
Download Map
3D View
CryoEM structure of a partial yeast 48S preinitiation complex
Release date: Nov. 5, 2014
Resolution: 4.0 Å
EM Method: Single-particle
Fitted PDBs: 3j81
Q-score: 0.326

Hussain T, Llacer JL, Fernandez IS, Munoz A, Martin-Marcos P, Savva CG, Lorsch JR, Hinnebusch AG, Ramakrishnan V

Cell (2014) 159 pp. 597-607 [ DOI: doi:10.1016/j.cell.2014.10.001 Pubmed: 25417110 ]

Sort by: Download
Showing 1 - 10 of 10. Page 1 of 1
Display:
Statistics
×

Download











































Preview first 10
Download

Filter By

Current Database

  • EMDB [10]

Current status

  • REL [10]

Sample type

  • Complex [10]
  • Protein [7]
  • RNA [7]
  • Ligand [4]
  • Sample [3]
  • Cellular component [1]

Organism

  • Kluyveromyces lactis [7]
  • Saccharomyces cerevisiae [5]
  • Kluyveromyces lactis [4]
  • Saccharomyces cerevisiae [3]

EM Method

  • Single-particle [10]

Resolution

  • ≥ 3Å and < 4Å [5]
  • ≥ 4Å and < 5Å [2]
  • ≥ 5Å and < 6Å [2]
  • ≥ 6Å and < 8Å [1]

Model molecular weight

  • 1-2 MDa [7]

Release Date

  • 2019 [2]
  • 2018 [5]
  • 2015 [2]
  • 2014 [1]

Author by name

  • Hinnebusch AG [10]
  • Hussain T [10]
  • Llacer JL [10]
  • Lorsch JR [8]
  • Ramakrishnan V [8]
  • Gordiyenko Y [7]
  • Kaur S [5]
  • Kumar R [5]
  • Nanda JD [5]
  • Saini AK [5]
  • Aitken CE [2]
  • Dong J [2]
  • Marler L [2]
  • Thakur A [2]
  • Villamayor L [2]
  • Fernandez IS [1]
  • Martin-marcos P [1]
  • Munoz A [1]
  • Savva CG [1]

Author by ORCID

  • Llacer JL [10]
  • Hussain T [10]
  • Nanda JD [5]
  • Lorsch JR [5]
  • Ramakrishnan V [5]
  • Saini AK [5]
  • Kaur S [5]
  • Ramakrishnan V [3]
  • Hinnebusch AG [2]
  • Aitken CE [2]
  • Fernandez IS [1]

Journal

  • ELIFE [5]
  • MOL CELL [4]
  • NUCLEIC ACIDS RES [2]
  • CELL [1]

Software

  • RELION [10]
  • GCTF [4]
  • CHIMERA, COOT, REFMAC [2]
  • CHIMERA, REFMAC [1]

Microscope

  • FEI POLARA 300 [6]
  • FEI TITAN KRIOS [4]

Electron Source

  • FIELD EMISSION GUN [10]

Film or detector model

  • FEI FALCON III 4K X 4K [6]
  • FEI FALCON II 4K X 4K [4]

External links

  • AlphaFold DB [7]
  • PDB [7]
  • PDBe-Kb [7]
  • UniProt [7]
  • ChEBI [4]
  • ChEMBL [4]
  • DrugBank [4]
  • Gene Ontology [4]
  • InterPro [4]
  • Pfam [4]
  • SCOP2 [2]
  • Complex Portal [1]