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sample_name:"Native SWR1 complex"

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Current Database

  • EMDB [20]

Current status

  • REL [20]

Sample type

  • Complex [20]
  • DNA [2]
  • Ligand [2]
  • Protein [2]

Organism

  • Saccharomyces cerevisiae [20]
  • Synthetic construct [2]
  • Saccharomyces cerevisiae [2]
  • Drosophila melanogaster [1]

EM Method

  • Single-particle [20]

Resolution

  • ≥ 3Å and < 4Å [7]
  • ≥ 4Å and < 5Å [6]
  • ≥ 5Å and < 6Å [3]
  • ≥ 6Å and < 8Å [4]

Model molecular weight

  • 500-1000 kDa [1]
  • 1-2 MDa [1]

Release Date

  • 2024 [20]

Author by name

  • Cha JS [20]
  • Gardner AM [20]
  • Hollmuller E [20]
  • Lei Q [20]
  • Louder RK [20]
  • Park G [20]
  • Pugh BF [20]
  • Ranjan A [20]
  • Stengel F [20]
  • Wu C [20]
  • Ye Z [20]

Author by ORCID

  • Louder RK [20]

Journal

  • CELL [20]

Software

  • RELION [14]
  • ISOLDE [1]
  • UCSF CHIMERAX [1]

Microscope

  • FEI TITAN KRIOS [20]

Electron Source

  • FIELD EMISSION GUN [20]

Film or detector model

  • GATAN K3 6K X 4K [20]

External links

  • AlphaFold DB [2]
  • ChEBI [2]
  • ChEMBL [2]
  • DrugBank [2]
  • Gene Ontology [2]
  • InterPro [2]
  • PDB [2]
  • PDBe-Kb [2]
  • Pfam [2]
  • UniProt [2]
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EMD-44074
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Cryo-EM structure of native SWR1 bound to DNA composite structure
Release date: Oct. 9, 2024
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 9b1d
Q-score: 0.435

Louder RK, Park G, Ye Z, Cha JS, Gardner AM, Lei Q, Ranjan A, Hollmuller E, Stengel F, Pugh BF, Wu C

Cell (2024) 187 pp. 6849-6864.e18 [ Pubmed: 39357520 DOI: doi:10.1016/j.cell.2024.09.007 ]

EMD-44075
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Cryo-EM structure of native SWR1 bound to nucleosome composite structure
Release date: Oct. 9, 2024
Resolution: 4.4 Å
EM Method: Single-particle
Fitted PDBs: 9b1e
Q-score: 0.191

Louder RK, Park G, Ye Z, Cha JS, Gardner AM, Lei Q, Ranjan A, Hollmuller E, Stengel F, Pugh BF, Wu C

Cell (2024) 187 pp. 6849-6864.e18 [ Pubmed: 39357520 DOI: doi:10.1016/j.cell.2024.09.007 ]

EMD-44093
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Cryo-EM structure of native SWR1, free complex composite structure
Release date: Oct. 9, 2024
Resolution: 3.9 Å
EM Method: Single-particle

Louder RK, Park G, Ye Z, Cha JS, Gardner AM, Lei Q, Ranjan A, Hollmuller E, Stengel F, Pugh BF, Wu C

Cell (2024) 187 pp. 6849-6864.e18 [ Pubmed: 39357520 DOI: doi:10.1016/j.cell.2024.09.007 ]

EMD-44106
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Cryo-EM structure of native SWR1 bound to DNA consensus map
Release date: Oct. 9, 2024
Resolution: 3.7 Å
EM Method: Single-particle

Louder RK, Park G, Ye Z, Cha JS, Gardner AM, Lei Q, Ranjan A, Hollmuller E, Stengel F, Pugh BF, Wu C

Cell (2024) 187 pp. 6849-6864.e18 [ Pubmed: 39357520 DOI: doi:10.1016/j.cell.2024.09.007 ]

EMD-44107
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RuvBL core from SWR1-DNA complex focused refinement
Release date: Oct. 9, 2024
Resolution: 3.3 Å
EM Method: Single-particle

Louder RK, Park G, Ye Z, Cha JS, Gardner AM, Lei Q, Ranjan A, Hollmuller E, Stengel F, Pugh BF, Wu C

Cell (2024) 187 pp. 6849-6864.e18 [ Pubmed: 39357520 DOI: doi:10.1016/j.cell.2024.09.007 ]

EMD-44108
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Swr1 ATPase domain from SWR1-DNA complex focused refinement
Release date: Oct. 9, 2024
Resolution: 4.5 Å
EM Method: Single-particle

Louder RK, Park G, Ye Z, Cha JS, Gardner AM, Lei Q, Ranjan A, Hollmuller E, Stengel F, Pugh BF, Wu C

Cell (2024) 187 pp. 6849-6864.e18 [ Pubmed: 39357520 DOI: doi:10.1016/j.cell.2024.09.007 ]

EMD-44109
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Arp6/Swc6 module from SWR1-DNA complex focused refinement
Release date: Oct. 9, 2024
Resolution: 3.6 Å
EM Method: Single-particle

Louder RK, Park G, Ye Z, Cha JS, Gardner AM, Lei Q, Ranjan A, Hollmuller E, Stengel F, Pugh BF, Wu C

Cell (2024) 187 pp. 6849-6864.e18 [ Pubmed: 39357520 DOI: doi:10.1016/j.cell.2024.09.007 ]

EMD-44110
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Cryo-EM structure of native SWR1 bound to DNA unmasked refinement filtered by local resolution
Release date: Oct. 9, 2024
Resolution: 3.4 Å
EM Method: Single-particle

Louder RK, Park G, Ye Z, Cha JS, Gardner AM, Lei Q, Ranjan A, Hollmuller E, Stengel F, Pugh BF, Wu C

Cell (2024) 187 pp. 6849-6864.e18 [ Pubmed: 39357520 DOI: doi:10.1016/j.cell.2024.09.007 ]

EMD-44307
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Cryo-EM structure of native SWR1 bound to nucleosome consensus map filtered by local resolution
Release date: Oct. 9, 2024
Resolution: 6.2 Å
EM Method: Single-particle

Louder RK, Park G, Ye Z, Cha JS, Gardner AM, Lei Q, Ranjan A, Hollmuller E, Stengel F, Pugh BF, Wu C

Cell (2024) 187 pp. 6849-6864.e18 [ Pubmed: 39357520 DOI: doi:10.1016/j.cell.2024.09.007 ]

EMD-44308
Download Map
3D View
RuvBL-associated core from SWR1-nucleosome complex focused refinement
Release date: Oct. 9, 2024
Resolution: 4.4 Å
EM Method: Single-particle

Louder RK, Park G, Ye Z, Cha JS, Gardner AM, Lei Q, Ranjan A, Hollmuller E, Stengel F, Pugh BF, Wu C

Cell (2024) 187 pp. 6849-6864.e18 [ Pubmed: 39357520 DOI: doi:10.1016/j.cell.2024.09.007 ]

Sort by: Download
Showing 1 - 10 of 20. Page 1 of 2
Display:
Statistics
×

Download











































Preview first 10
Download

Filter By

Current Database

  • EMDB [20]

Current status

  • REL [20]

Sample type

  • Complex [20]
  • DNA [2]
  • Ligand [2]
  • Protein [2]

Organism

  • Saccharomyces cerevisiae [20]
  • Synthetic construct [2]
  • Saccharomyces cerevisiae [2]
  • Drosophila melanogaster [1]

EM Method

  • Single-particle [20]

Resolution

  • ≥ 3Å and < 4Å [7]
  • ≥ 4Å and < 5Å [6]
  • ≥ 5Å and < 6Å [3]
  • ≥ 6Å and < 8Å [4]

Model molecular weight

  • 500-1000 kDa [1]
  • 1-2 MDa [1]

Release Date

  • 2024 [20]

Author by name

  • Cha JS [20]
  • Gardner AM [20]
  • Hollmuller E [20]
  • Lei Q [20]
  • Louder RK [20]
  • Park G [20]
  • Pugh BF [20]
  • Ranjan A [20]
  • Stengel F [20]
  • Wu C [20]
  • Ye Z [20]

Author by ORCID

  • Louder RK [20]

Journal

  • CELL [20]

Software

  • RELION [14]
  • ISOLDE [1]
  • UCSF CHIMERAX [1]

Microscope

  • FEI TITAN KRIOS [20]

Electron Source

  • FIELD EMISSION GUN [20]

Film or detector model

  • GATAN K3 6K X 4K [20]

External links

  • AlphaFold DB [2]
  • ChEBI [2]
  • ChEMBL [2]
  • DrugBank [2]
  • Gene Ontology [2]
  • InterPro [2]
  • PDB [2]
  • PDBe-Kb [2]
  • Pfam [2]
  • UniProt [2]