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sample_name:"Mus musculus"

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Current Database

  • EMDB [28]

Current status

  • REL [28]

Sample type

  • Protein [14]
  • Cell [12]
  • Complex [12]
  • Ligand [9]
  • RNA [3]
  • Virus [3]
  • Cellular component [2]

Organism

  • Mus musculus [28]
  • Homo sapiens [3]
  • Dengue virus [2]
  • Alphapapillomavirus 9 [1]
  • Tick-borne encephalitis virus [1]

EM Method

  • Subtomogram averaging [15]
  • Single-particle [13]

Resolution

  • < 2Å [2]
  • ≥ 2Å and < 3Å [2]
  • ≥ 3Å and < 4Å [7]
  • ≥ 6Å and < 8Å [1]
  • ≥ 8Å and < 12Å [3]
  • ≥ 12Å and < 16Å [1]
  • ≥ 16Å and < 20Å [1]
  • ≥ 20Å and < 30Å [1]
  • ≥ 30Å [10]

Model molecular weight

  • 100-250 kDa [2]
  • 250-500 kDa [3]
  • 1-2 MDa [2]
  • 2-5 MDa [3]
  • > 10 MDa [3]

Release Date

  • 2025 [2]
  • 2024 [14]
  • 2023 [3]
  • 2022 [3]
  • 2021 [2]
  • 2020 [2]
  • 2019 [1]
  • 2018 [1]

Author by name

  • Li Z [10]
  • Chait BT [9]
  • Duquette M [9]
  • Echeverria I [9]
  • Fernandez-martinez J [9]
  • Guo Q [9]
  • Hutchings J [9]
  • Molloy K [9]
  • Rout MP [9]
  • Sali A [9]
  • Shaikh F [9]
  • Shi Y [9]
  • Singh D [9]
  • Soni N [9]
  • Suslov S [9]
  • Villa E [9]
  • Wang J [9]
  • Van Eeuwen T [9]
  • Coscia F [3]
  • Erdmann PS [3]
  • Kalebic N [3]
  • Kaluthantrige Don F [3]
  • Klena N [3]
  • Leroux F [3]
  • Nguyen HTD [3]
  • Perone G [3]
  • Silva M [3]
  • Sorrentino S [3]
  • Swuec P [3]
  • Vazzana R [3]
  • Wang Y [3]
  • A Dowd K [2]
  • Aleshnick M [2]
  • Cao X [2]
  • Carter AP [2]
  • Chen RE [2]
  • Cheng Y [2]
  • Cui Y [2]
  • D Speer S [2]
  • Diamond MS [2]
  • Dowd AD [2]
  • Foster HE [2]
  • Govero J [2]
  • Guo X [2]
  • Guo Y [2]
  • He X [2]
  • Huo Y [2]
  • Huo YG [2]
  • Jiang T [2]
  • Kielian M [2]
  • Klose T [2]
  • Koenig S [2]
  • Kuhn RJ [2]
  • Larman B [2]
  • Li H [2]
  • Miller AS [2]
  • Mukherjee S [2]
  • Pierson TC [2]
  • Qin Y [2]
  • Sevvana M [2]
  • Sha J [2]
  • Sirohi D [2]
  • Speer S [2]
  • Stahlberg H [2]
  • Sukupolvi-petty S [2]
  • Tu H [2]
  • Vanblargan LA [2]
  • Ventura Santos C [2]
  • Whitener BM [2]
  • Xiao H [2]
  • Xie W [2]
  • Yao L [2]
  • Zhang D [2]
  • Zhang H [2]
  • Zhang S [2]
  • Zheng A [2]
  • Zhu Y [2]
  • Agip AA [1]
  • Altmann KH [1]
  • Ambrozkiewicz MC [1]
  • Bang-soerensen R [1]
  • Bennetts FM [1]
  • Beule D [1]
  • Blaza JN [1]
  • Borisova E [1]
  • Bridges HR [1]
  • Briggs JAG [1]
  • Burger J [1]
  • Chen J [1]
  • Chi X [1]
  • Christopoulos A [1]
  • Ciazynska KA [1]
  • Danev R [1]
  • Dehghani-ghahnaviyeh S [1]
  • Formanova P [1]
  • Fuzik T [1]
  • Glukhova A [1]
  • Grba D [1]
  • Grba DN [1]
  • Gu Y [1]

Author by ORCID

  • Guo Q [9]
  • Echeverria I [9]
  • Coscia F [3]
  • Erdmann PS [3]
  • Vazzana R [3]
  • Klena N [3]
  • Kalebic N [3]
  • Silva M [3]
  • Perone G [3]
  • Nguyen HTD [3]
  • Aleshnick M [2]
  • Whitener BM [2]
  • Zhang H [2]
  • Carter AP [2]
  • Sirohi D [2]
  • Guo X [2]
  • Klose T [2]
  • Zheng A [2]
  • Qin Y [2]
  • Pierson TC [2]
  • Ventura Santos C [2]
  • Foster HE [2]
  • Huo Y [2]
  • Diamond MS [2]
  • Larman B [2]
  • A Dowd K [2]
  • Kuhn RJ [2]
  • Ambrozkiewicz MC [1]
  • Venugopal H [1]
  • Kaufman JGG [1]
  • Blaza JN [1]
  • Vieira-vieira CH [1]
  • Yonekura K [1]
  • Munro S [1]
  • Murai M [1]
  • Bridges HR [1]
  • Mobbs JI [1]
  • Kramer G [1]
  • Taylor RJ [1]
  • Varnavides G [1]
  • Tajkhorshid E [1]
  • Hirst J [1]
  • Leidl ML [1]
  • Zubkov N [1]
  • Tarabykin V [1]
  • Gunnigmann M [1]
  • Thal DM [1]
  • Krupp F [1]
  • Altmann KH [1]
  • Sprink T [1]
  • Zinnall U [1]
  • Landthaler M [1]
  • Sachse C [1]
  • Stahlberg H [1]
  • Fuzik T [1]
  • Turko P [1]
  • Heitman LH [1]
  • Kawakami K [1]
  • Miyoshi H [1]
  • Muller-caspary K [1]
  • Takaba K [1]
  • Agip AA [1]
  • Beule D [1]
  • Li S [1]
  • Guerrero-ferreira RC [1]
  • Yin Z [1]
  • Burger J [1]
  • May LT [1]
  • Munster-wandowski A [1]
  • Wen PC [1]
  • Zhao Q [1]
  • Liu X [1]
  • Nguyen ATN [1]
  • Kraushar ML [1]
  • Imami K [1]
  • Zheng Q [1]
  • Locher KP [1]
  • Maki-yonekura S [1]
  • Owen DJ [1]
  • Lau K [1]
  • Tagiltsev G [1]
  • Ciazynska KA [1]
  • Yanagisawa H [1]
  • Ophus C [1]
  • Myasnikov A [1]
  • Bennetts FM [1]
  • Grba DN [1]
  • Vida I [1]
  • Van Der Es D [1]
  • Briggs JAG [1]
  • Glukhova A [1]
  • Plevka P [1]
  • Christopoulos A [1]
  • Bang-soerensen R [1]
  • Ruzek D [1]

Journal

  • CELL [9]
  • BIORXIV [3]
  • NAT COMMUN [3]
  • NAT METHODS [3]
  • J CELL BIOL [2]
  • NATURE [2]
  • PNAS [2]
  • ACS CHEM BIOL [1]
  • COMMUN CHEM [1]
  • J BIOL CHEM [1]
  • J VIROL [1]
  • MOL CELL [1]
  • SCI ADV [1]
  • TRENDS BIOCHEM SCI [1]

Software

  • RELION [10]
  • NOVACTF [3]
  • WARP [3]
  • DYNAMO [2]
  • GCTF [2]
  • IMOD [2]
  • JSPR [2]
  • CISTEM [1]
  • SPARX [1]
  • SPHIRE [1]
  • SUBTOM [1]

Microscope

  • FEI TITAN KRIOS [20]
  • TFS KRIOS [4]
  • FEI TALOS ARCTICA [2]
  • FEI TECNAI F30 [1]
  • JEOL CRYO ARM 300 [1]

Electron Source

  • FIELD EMISSION GUN [28]

Film or detector model

  • GATAN K2 SUMMIT 4K X 4K [10]
  • GATAN K3 BIOCONTINUUM 6K X 4K [9]
  • TFS FALCON 4I 4K X 4K [3]
  • GATAN K3 BIOQUANTUM 6K X 4K [2]
  • FEI FALCON II 4K X 4K [1]
  • FEI FALCON III 4K X 4K [1]
  • FEI FALCON IV 4K X 4K [1]
  • GATAN K3 6K X 4K [1]

External links

  • AlphaFold DB [14]
  • PDBe-Kb [14]
  • UniProt [14]
  • PDB [13]
  • Gene Ontology [11]
  • Pfam [11]
  • ChEBI [9]
  • ChEMBL [9]
  • InterPro [9]
  • DrugBank [8]
  • EMPIAR [5]
  • Complex Portal [3]
  • SCOP2 [2]
  • CATH [1]
Sort by: Download
Showing 1 - 10 of 28. Page 1 of 3
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EMD-53278
Download Map
3D View
The structure of the COPI leaf bound to GOLPH3
Release date: Oct. 22, 2025
Resolution: 7.5 Å
EM Method: Subtomogram averaging
Fitted PDBs: 9qpq
Q-score: 0.235

Taylor RJ, Zubkov N, Ciazynska KA, Kaufman JGG, Tagiltsev G, Owen DJ, Briggs JAG, Munro S

Sci Adv (2025) 11 pp. eaea0016-eaea0016 [ Pubmed: 41042862 DOI: doi:10.1126/sciadv.aea0016 ]

EMD-47879
Download Map
3D View
Human adenosine A3 receptor Gi1 complex bound to adenosine
Release date: Aug. 20, 2025
Resolution: 3.6 Å
EM Method: Single-particle
Fitted PDBs: 9ebh

Zhang L, Mobbs JI, Bennetts FM, Venugopal H, Nguyen ATN, Christopoulos A, van der Es D, Heitman LH, May LT, Glukhova A, Thal DM

Nat Commun (2025) 16 pp. 7674-7674 [ Pubmed: 40825947 DOI: doi:10.1038/s41467-025-62872-x ]

EMD-18003
Download Map
3D View
ABCG2 in complex with AZ99 and 5D3 Fab
Release date: Nov. 6, 2024
Resolution: 3.0 Å
EM Method: Single-particle
Fitted PDBs: 8pxo
Q-score: 0.536

Yu Q, Dehghani-Ghahnaviyeh S, Rasouli A, Sadurni A, Kowal J, Bang-Soerensen R, Wen PC, Tinzl-Zechner M, Irobalieva RN, Ni D, Stahlberg H, Altmann KH, Tajkhorshid E, Locher KP

ACS Chem Biol (2024) 19 pp. 2304-2313 [ DOI: doi:10.1021/acschembio.4c00353 Pubmed: 39445888 ]

EMD-50630
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3D View
mus musculus ribosome from SOLIST lamellas
Release date: Sept. 11, 2024
Resolution: 8.3 Å
EM Method: Subtomogram averaging

Nguyen HTD, Perone G, Klena N, Vazzana R, Kaluthantrige Don F, Silva M, Sorrentino S, Swuec P, Leroux F, Kalebic N, Coscia F, Erdmann PS

Nat Methods (2024) 21 pp. 1693-1701 [ DOI: doi:10.1038/s41592-024-02384-6 Pubmed: 39271806 ]

EMD-50646
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3D View
mus musculus heart thin filament from SOLIST lamellas
Release date: Sept. 11, 2024
Resolution: 20.0 Å
EM Method: Subtomogram averaging

Nguyen HTD, Perone G, Klena N, Vazzana R, Kaluthantrige Don F, Silva M, Sorrentino S, Swuec P, Leroux F, Kalebic N, Coscia F, Erdmann PS

Nat Methods (2024) 21 pp. 1693-1701 [ DOI: doi:10.1038/s41592-024-02384-6 Pubmed: 39271806 ]

EMD-50655
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3D View
mus musculus heart thin filament with myosin heads from SOLIST lamellas
Release date: Sept. 11, 2024
Resolution: 19.0 Å
EM Method: Subtomogram averaging

Nguyen HTD, Perone G, Klena N, Vazzana R, Kaluthantrige Don F, Silva M, Sorrentino S, Swuec P, Leroux F, Kalebic N, Coscia F, Erdmann PS

Nat Methods (2024) 21 pp. 1693-1701 [ DOI: doi:10.1038/s41592-024-02384-6 Pubmed: 39271806 ]

EMD-44379
Composite map
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3D View
In-cell Mus musculus nuclear pore complex with nuclear basket
Release date: Aug. 21, 2024
Resolution: 35.0 Å
EM Method: Subtomogram averaging

Singh D, Soni N, Hutchings J, Echeverria I, Shaikh F, Duquette M, Suslov S, Li Z, van Eeuwen T, Molloy K, Shi Y, Wang J, Guo Q, Chait BT, Fernandez-Martinez J, Rout MP, Sali A, Villa E

Cell (2024) 187 pp. 5267-5281.e13 [ DOI: doi:10.1016/j.cell.2024.07.020 Pubmed: 39127037 ]

EMD-45216
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In-cell Mus musculus nuclear pore complex with nuclear basket consensus map
Release date: Aug. 21, 2024
Resolution: 35.0 Å
EM Method: Subtomogram averaging

Singh D, Soni N, Hutchings J, Echeverria I, Shaikh F, Duquette M, Suslov S, Li Z, van Eeuwen T, Molloy K, Shi Y, Wang J, Guo Q, Chait BT, Fernandez-Martinez J, Rout MP, Sali A, Villa E

Cell (2024) 187 pp. 5267-5281.e13 [ DOI: doi:10.1016/j.cell.2024.07.020 Pubmed: 39127037 ]

EMD-45219
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In-cell Mus musculus nuclear pore complex cytoplasmic ring focused refinement
Release date: Aug. 21, 2024
Resolution: 34.0 Å
EM Method: Subtomogram averaging

Singh D, Soni N, Hutchings J, Echeverria I, Shaikh F, Duquette M, Suslov S, Li Z, van Eeuwen T, Molloy K, Shi Y, Wang J, Guo Q, Chait BT, Fernandez-Martinez J, Rout MP, Sali A, Villa E

Cell (2024) 187 pp. 5267-5281.e13 [ DOI: doi:10.1016/j.cell.2024.07.020 Pubmed: 39127037 ]

EMD-45220
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3D View
In-cell Mus musculus nuclear pore complex inner ring focused refinement
Release date: Aug. 21, 2024
Resolution: 32.0 Å
EM Method: Subtomogram averaging

Singh D, Soni N, Hutchings J, Echeverria I, Shaikh F, Duquette M, Suslov S, Li Z, van Eeuwen T, Molloy K, Shi Y, Wang J, Guo Q, Chait BT, Fernandez-Martinez J, Rout MP, Sali A, Villa E

Cell (2024) 187 pp. 5267-5281.e13 [ DOI: doi:10.1016/j.cell.2024.07.020 Pubmed: 39127037 ]

Sort by: Download
Showing 1 - 10 of 28. Page 1 of 3
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Filter By

Current Database

  • EMDB [28]

Current status

  • REL [28]

Sample type

  • Protein [14]
  • Cell [12]
  • Complex [12]
  • Ligand [9]
  • RNA [3]
  • Virus [3]
  • Cellular component [2]

Organism

  • Mus musculus [28]
  • Homo sapiens [3]
  • Dengue virus [2]
  • Alphapapillomavirus 9 [1]
  • Tick-borne encephalitis virus [1]

EM Method

  • Subtomogram averaging [15]
  • Single-particle [13]

Resolution

  • < 2Å [2]
  • ≥ 2Å and < 3Å [2]
  • ≥ 3Å and < 4Å [7]
  • ≥ 6Å and < 8Å [1]
  • ≥ 8Å and < 12Å [3]
  • ≥ 12Å and < 16Å [1]
  • ≥ 16Å and < 20Å [1]
  • ≥ 20Å and < 30Å [1]
  • ≥ 30Å [10]

Model molecular weight

  • 100-250 kDa [2]
  • 250-500 kDa [3]
  • 1-2 MDa [2]
  • 2-5 MDa [3]
  • > 10 MDa [3]

Release Date

  • 2025 [2]
  • 2024 [14]
  • 2023 [3]
  • 2022 [3]
  • 2021 [2]
  • 2020 [2]
  • 2019 [1]
  • 2018 [1]

Author by name

  • Li Z [10]
  • Chait BT [9]
  • Duquette M [9]
  • Echeverria I [9]
  • Fernandez-martinez J [9]
  • Guo Q [9]
  • Hutchings J [9]
  • Molloy K [9]
  • Rout MP [9]
  • Sali A [9]
  • Shaikh F [9]
  • Shi Y [9]
  • Singh D [9]
  • Soni N [9]
  • Suslov S [9]
  • Villa E [9]
  • Wang J [9]
  • Van Eeuwen T [9]
  • Coscia F [3]
  • Erdmann PS [3]
  • Kalebic N [3]
  • Kaluthantrige Don F [3]
  • Klena N [3]
  • Leroux F [3]
  • Nguyen HTD [3]
  • Perone G [3]
  • Silva M [3]
  • Sorrentino S [3]
  • Swuec P [3]
  • Vazzana R [3]
  • Wang Y [3]
  • A Dowd K [2]
  • Aleshnick M [2]
  • Cao X [2]
  • Carter AP [2]
  • Chen RE [2]
  • Cheng Y [2]
  • Cui Y [2]
  • D Speer S [2]
  • Diamond MS [2]
  • Dowd AD [2]
  • Foster HE [2]
  • Govero J [2]
  • Guo X [2]
  • Guo Y [2]
  • He X [2]
  • Huo Y [2]
  • Huo YG [2]
  • Jiang T [2]
  • Kielian M [2]
  • Klose T [2]
  • Koenig S [2]
  • Kuhn RJ [2]
  • Larman B [2]
  • Li H [2]
  • Miller AS [2]
  • Mukherjee S [2]
  • Pierson TC [2]
  • Qin Y [2]
  • Sevvana M [2]
  • Sha J [2]
  • Sirohi D [2]
  • Speer S [2]
  • Stahlberg H [2]
  • Sukupolvi-petty S [2]
  • Tu H [2]
  • Vanblargan LA [2]
  • Ventura Santos C [2]
  • Whitener BM [2]
  • Xiao H [2]
  • Xie W [2]
  • Yao L [2]
  • Zhang D [2]
  • Zhang H [2]
  • Zhang S [2]
  • Zheng A [2]
  • Zhu Y [2]
  • Agip AA [1]
  • Altmann KH [1]
  • Ambrozkiewicz MC [1]
  • Bang-soerensen R [1]
  • Bennetts FM [1]
  • Beule D [1]
  • Blaza JN [1]
  • Borisova E [1]
  • Bridges HR [1]
  • Briggs JAG [1]
  • Burger J [1]
  • Chen J [1]
  • Chi X [1]
  • Christopoulos A [1]
  • Ciazynska KA [1]
  • Danev R [1]
  • Dehghani-ghahnaviyeh S [1]
  • Formanova P [1]
  • Fuzik T [1]
  • Glukhova A [1]
  • Grba D [1]
  • Grba DN [1]
  • Gu Y [1]

Author by ORCID

  • Guo Q [9]
  • Echeverria I [9]
  • Coscia F [3]
  • Erdmann PS [3]
  • Vazzana R [3]
  • Klena N [3]
  • Kalebic N [3]
  • Silva M [3]
  • Perone G [3]
  • Nguyen HTD [3]
  • Aleshnick M [2]
  • Whitener BM [2]
  • Zhang H [2]
  • Carter AP [2]
  • Sirohi D [2]
  • Guo X [2]
  • Klose T [2]
  • Zheng A [2]
  • Qin Y [2]
  • Pierson TC [2]
  • Ventura Santos C [2]
  • Foster HE [2]
  • Huo Y [2]
  • Diamond MS [2]
  • Larman B [2]
  • A Dowd K [2]
  • Kuhn RJ [2]
  • Ambrozkiewicz MC [1]
  • Venugopal H [1]
  • Kaufman JGG [1]
  • Blaza JN [1]
  • Vieira-vieira CH [1]
  • Yonekura K [1]
  • Munro S [1]
  • Murai M [1]
  • Bridges HR [1]
  • Mobbs JI [1]
  • Kramer G [1]
  • Taylor RJ [1]
  • Varnavides G [1]
  • Tajkhorshid E [1]
  • Hirst J [1]
  • Leidl ML [1]
  • Zubkov N [1]
  • Tarabykin V [1]
  • Gunnigmann M [1]
  • Thal DM [1]
  • Krupp F [1]
  • Altmann KH [1]
  • Sprink T [1]
  • Zinnall U [1]
  • Landthaler M [1]
  • Sachse C [1]
  • Stahlberg H [1]
  • Fuzik T [1]
  • Turko P [1]
  • Heitman LH [1]
  • Kawakami K [1]
  • Miyoshi H [1]
  • Muller-caspary K [1]
  • Takaba K [1]
  • Agip AA [1]
  • Beule D [1]
  • Li S [1]
  • Guerrero-ferreira RC [1]
  • Yin Z [1]
  • Burger J [1]
  • May LT [1]
  • Munster-wandowski A [1]
  • Wen PC [1]
  • Zhao Q [1]
  • Liu X [1]
  • Nguyen ATN [1]
  • Kraushar ML [1]
  • Imami K [1]
  • Zheng Q [1]
  • Locher KP [1]
  • Maki-yonekura S [1]
  • Owen DJ [1]
  • Lau K [1]
  • Tagiltsev G [1]
  • Ciazynska KA [1]
  • Yanagisawa H [1]
  • Ophus C [1]
  • Myasnikov A [1]
  • Bennetts FM [1]
  • Grba DN [1]
  • Vida I [1]
  • Van Der Es D [1]
  • Briggs JAG [1]
  • Glukhova A [1]
  • Plevka P [1]
  • Christopoulos A [1]
  • Bang-soerensen R [1]
  • Ruzek D [1]

Journal

  • CELL [9]
  • BIORXIV [3]
  • NAT COMMUN [3]
  • NAT METHODS [3]
  • J CELL BIOL [2]
  • NATURE [2]
  • PNAS [2]
  • ACS CHEM BIOL [1]
  • COMMUN CHEM [1]
  • J BIOL CHEM [1]
  • J VIROL [1]
  • MOL CELL [1]
  • SCI ADV [1]
  • TRENDS BIOCHEM SCI [1]

Software

  • RELION [10]
  • NOVACTF [3]
  • WARP [3]
  • DYNAMO [2]
  • GCTF [2]
  • IMOD [2]
  • JSPR [2]
  • CISTEM [1]
  • SPARX [1]
  • SPHIRE [1]
  • SUBTOM [1]

Microscope

  • FEI TITAN KRIOS [20]
  • TFS KRIOS [4]
  • FEI TALOS ARCTICA [2]
  • FEI TECNAI F30 [1]
  • JEOL CRYO ARM 300 [1]

Electron Source

  • FIELD EMISSION GUN [28]

Film or detector model

  • GATAN K2 SUMMIT 4K X 4K [10]
  • GATAN K3 BIOCONTINUUM 6K X 4K [9]
  • TFS FALCON 4I 4K X 4K [3]
  • GATAN K3 BIOQUANTUM 6K X 4K [2]
  • FEI FALCON II 4K X 4K [1]
  • FEI FALCON III 4K X 4K [1]
  • FEI FALCON IV 4K X 4K [1]
  • GATAN K3 6K X 4K [1]

External links

  • AlphaFold DB [14]
  • PDBe-Kb [14]
  • UniProt [14]
  • PDB [13]
  • Gene Ontology [11]
  • Pfam [11]
  • ChEBI [9]
  • ChEMBL [9]
  • InterPro [9]
  • DrugBank [8]
  • EMPIAR [5]
  • Complex Portal [3]
  • SCOP2 [2]
  • CATH [1]