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sample_name:"LptDEM-RTP45 complex"

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  • Escherichia coli [1]
  • Shigella flexneri [1]

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Model molecular weight

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Release Date

  • 2025 [1]

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  • Allyjaun S [1]
  • Basle A [1]
  • Clark R [1]
  • Dunbar E [1]
  • Hubbard J [1]
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  • Newman H [1]
  • Van Den Berg B [1]

Author by ORCID

  • Khalid S [1]
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  • Clark R [1]

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EMD-54170
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Cryo-EM structure of Shigella flexneri LptDE in complex with RTP45 superinfection exclusion protein from RTP bacteriophage and endogenous LptM
Release date: Dec. 10, 2025
Resolution: 3.01 Å
EM Method: Single-particle
Fitted PDBs: 9rps
Q-score: 0.554

Dunbar E, Clark R, Basle A, Allyjaun S, Newman H, Hubbard J, Khalid S, van den Berg B

PNAS (2025) 122 pp. e2516650122-e2516650122 [ Pubmed: 41296721 DOI: doi:10.1073/pnas.2516650122 ]

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Filter By

Current Database

  • EMDB [1]

Current status

  • REL [1]

Sample type

  • Complex [1]
  • Ligand [1]
  • Protein [1]

Organism

  • Rtpvirus rtp [1]
  • Escherichia coli [1]
  • Shigella flexneri [1]

EM Method

  • Single-particle [1]

Resolution

  • ≥ 3Å and < 4Å [1]

Model molecular weight

  • 100-250 kDa [1]

Release Date

  • 2025 [1]

Author by name

  • Allyjaun S [1]
  • Basle A [1]
  • Clark R [1]
  • Dunbar E [1]
  • Hubbard J [1]
  • Khalid S [1]
  • Newman H [1]
  • Van Den Berg B [1]

Author by ORCID

  • Khalid S [1]
  • Basle A [1]
  • Van Den Berg B [1]
  • Clark R [1]

Journal

  • PNAS [1]

Microscope

  • TFS KRIOS [1]

Electron Source

  • FIELD EMISSION GUN [1]

Film or detector model

  • FEI FALCON IV 4K X 4K [1]

External links

  • AlphaFold DB [1]
  • ChEBI [1]
  • ChEMBL [1]
  • DrugBank [1]
  • PDB [1]
  • PDBe-Kb [1]
  • Pfam [1]
  • UniProt [1]