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sample_name:"LptDE-RBP complex"

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Current Database

  • EMDB [3]

Current status

  • REL [3]

Sample type

  • Complex [3]
  • Protein [3]

Organism

  • Dhillonvirus oekolampad [3]
  • Shigella flexneri [3]

EM Method

  • Single-particle [3]

Resolution

  • ≥ 2Å and < 3Å [2]
  • ≥ 3Å and < 4Å [1]

Release Date

  • 2025 [3]

Author by name

  • Allyjaun S [3]
  • Basle A [3]
  • Clark R [3]
  • Dunbar E [3]
  • Hubbard J [3]
  • Khalid S [3]
  • Newman H [3]
  • Van Den Berg B [3]

Journal

  • PNAS [3]

Software

  • CRYOSPARC [2]

Microscope

  • TFS KRIOS [3]

Electron Source

  • FIELD EMISSION GUN [3]

Film or detector model

  • FEI FALCON IV 4K X 4K [3]

External links

  • AlphaFold DB [3]
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EMD-54171
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Cryo-EM structure of the open state of Shigella flexneri LptDE bound by the RBP of Oekolampad phage
Release date: Dec. 10, 2025
Resolution: 2.81 Å
EM Method: Single-particle
Fitted PDBs: 9rpt
Q-score: 0.591

Dunbar E, Clark R, Basle A, Allyjaun S, Newman H, Hubbard J, Khalid S, van den Berg B

PNAS (2025) 122 pp. e2516650122-e2516650122 [ DOI: doi:10.1073/pnas.2516650122 Pubmed: 41296721 ]

EMD-54173
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Cryo-EM structure of Shigella flexneri LptDE dimer: closed-state unbound and open-state bound by Oekolampad phage RBP
Release date: Dec. 10, 2025
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 9rpw
Q-score: 0.517

Dunbar E, Clark R, Basle A, Allyjaun S, Newman H, Hubbard J, Khalid S, van den Berg B

PNAS (2025) 122 pp. e2516650122-e2516650122 [ DOI: doi:10.1073/pnas.2516650122 Pubmed: 41296721 ]

EMD-54175
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Cryo-EM structure of Shigella flexneri LptDE bound by phage RBP reveals N-terminal strand insertion into lateral gate
Release date: Dec. 10, 2025
Resolution: 2.76 Å
EM Method: Single-particle
Fitted PDBs: 9rqi
Q-score: 0.584

Dunbar E, Clark R, Basle A, Allyjaun S, Newman H, Hubbard J, Khalid S, van den Berg B

PNAS (2025) 122 pp. e2516650122-e2516650122 [ DOI: doi:10.1073/pnas.2516650122 Pubmed: 41296721 ]

Sort by: Download
Showing 1 - 3 of 3. Page 1 of 1
Display:
Statistics
×

Download











































Preview first 10
Download

Filter By

Current Database

  • EMDB [3]

Current status

  • REL [3]

Sample type

  • Complex [3]
  • Protein [3]

Organism

  • Dhillonvirus oekolampad [3]
  • Shigella flexneri [3]

EM Method

  • Single-particle [3]

Resolution

  • ≥ 2Å and < 3Å [2]
  • ≥ 3Å and < 4Å [1]

Release Date

  • 2025 [3]

Author by name

  • Allyjaun S [3]
  • Basle A [3]
  • Clark R [3]
  • Dunbar E [3]
  • Hubbard J [3]
  • Khalid S [3]
  • Newman H [3]
  • Van Den Berg B [3]

Journal

  • PNAS [3]

Software

  • CRYOSPARC [2]

Microscope

  • TFS KRIOS [3]

Electron Source

  • FIELD EMISSION GUN [3]

Film or detector model

  • FEI FALCON IV 4K X 4K [3]

External links

  • AlphaFold DB [3]