Electron Microscopy Data Bank

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Chaves-sanjuan A [5]
Berlinguer M [4]
Bolognesi M [4]
Morris KL [4]
Wang Y [4]
Dong A [3]
Armache JP [2]
Avila Ibarra A [2]
Baker M [2]
Buffalo CZ [2]
Bücker R [2]
Cameron AD [2]
Cazey C [2]
Cheng Y [2]
Chiu W [2]
Desormeaux A [2]
Finzi A [2]
Garcia-alai M [2]
Grünewald K [2]
Gu C [2]
Halebian M [2]
Herschhorn A [2]
Hurley JH [2]
Jones JR [2]
Lamour VL [2]
Landau M [2]
Liu Y [2]
Maduke M [2]
Mao Y [2]
Noble AJ [2]
Pintilie G [2]
Sessions RB [2]
Seuring C [2]
Smith CJ [2]
Sodroski JG [2]
Stahlberg H [2]
Veith K [2]
Vidmar VV [2]
Wang L [2]
Weixlbaumer AW [2]
Wu S [2]
Xiang SH [2]
Xu M [2]
Acebron I [1]
Antermite D [1]
Arotcarena M. [1]
Baron T [1]
Bell TA [1]
Bepler T [1]
Berbon M [1]
Berger B [1]
Bezard E [1]
Biyani N [1]
Blikstad C [1]
Bock LV [1]
Borkowski B [1]
Boskovic J [1]
Bousset L [1]
Brasch J [1]
Broggini L [1]
Bull JA [1]
Burger D [1]
Canron M [1]
Carragher B [1]
Chami M [1]
Chen J [1]
Chen ZJ [1]
Clarke OB [1]
Coleman JA [1]
Daneshparvar N [1]
Darst SA [1]
Davis JH [1]
De Giorgi F [1]
De Nuccio F [1]
Deng Y [1]
Feuillie C [1]
Fischer N [1]
Gao Y [1]
Gatsogiannis C [1]
Gaullier G [1]
Gouaux E [1]
Grubmueller H [1]
He X [1]
Hofmann S [1]
Hou F [1]
Hu Z [1]
Huang L [1]
Hummer G [1]
Ichas F [1]
Januliene D [1]
Jensen GJ [1]
Jia M [1]
Jiang QX [1]
Kalyankumar KS [1]
Kang JY [1]
Kashyrina M [1]
Klink B [1]
Konevega AL [1]
Laferriere F [1]
Laughlin T [1]

Journal

EMPIAR Experiment type

EMPIAR Image category

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EMPIAR-13154

Release date: Jan. 25, 2026
Dataset size: 43.6 TB
Experiment type: EMDB

Ehses K, López-Alonso JP, Antico O, Azem A, Muquit MMK, Ubarretxena-Belandia I, Fernández-Busnadiego R, Lang Y, Rudack T

Sci Adv ()

Image sets:

Unaligned multi-frame micrographs of Hsp60 + Hsp10 + MgATP (30 minutes incubation time)
particles for ATP football, ATP double ring and ATP bullet
Unaligned multi-frame micrographs of Hsp60 + Hsp10 + MgATP (1 minute incubation time)
Unaligned multi-frame micrographs of Hsp60 + Hsp10 + MgATP (7 minutes incubation time)
particles for ATP single ring, ADP single ring and ATP half football
Unaligned multi-frame micrographs of Hsp60 + Hsp10 + MgATP (30 seconds incubation time)

[Show more]

EMPIAR-12571

Release date: Dec. 7, 2025
Dataset size: 2.8 TB
Experiment type: EMDB

Wang Y

To Be Published

Image sets:

Cryo electron micrographs of Arabidopsis thaliana H3.3-nucleosome with Arabidopsis native 147bp DNA 15.2.2
Particles for cryo electron micrographs of Arabidopsis thaliana H3.3-nucleosome with Arabidopsis native 147bp DNA 15.2.2

EMPIAR-12572

Release date: Dec. 7, 2025
Dataset size: 2.0 TB
Experiment type: EMDB

Wang Y

To Be Published

Image sets:

Gain reference for cryo electron micrographs of Arabidopsis thaliana H2A.Z-H3.3-nucleosome with Arabidopsis native 147bp DNA 15.2.2
Cryo electron micrographs of Arabidopsis thaliana H2A.Z-H3.3-nucleosome with Arabidopsis native 147bp DNA 15.2.2
Particles for cryo electron micrographs of Arabidopsis thaliana H2A.Z-H3.3-nucleosome with Arabidopsis native 147bp DNA 15.2.2

EMPIAR-12327

Related EMDB

RNAP-TopoI complex on bubble scaffold

Release date: Nov. 18, 2025
Dataset size: 1.7 TB
Experiment type: EMDB

Vidmar VV, Borde CB, Bruno LB, Takacs MT, Batisse CB, Saint-Andre CSA, Zhu CZ, Espeli OE, Lamour VL, Weixlbaumer AW

To Be Published

Image sets:

picked particles of of RNAP-TopoI on bubble scaffold
unaligned multi-frame movies of RNAP-TopoI on bubble scaffold

EMPIAR-12328

Release date: Nov. 18, 2025
Dataset size: 1.5 TB
Experiment type: EMDB

Vidmar VV, Borde CB, Bruno LB, Takacs MT, Batisse CB, Saint-Andre CSA, Zhu CZ, Espeli OE, Lamour VL, Weixlbaumer AW

To Be Published

Image sets:

picked particles of RNAP-TopoI on short-overhang scaffold
unaligned multi-frame movies of RNAP-TopoI on short-overhang scaffold

EMPIAR-12875

Release date: Oct. 29, 2025
Dataset size: 27.8 TB
Experiment type: EMDB

Klink B, Alavizargar A, Kalyankumar KS, Chen M, Heuer A, Gatsogiannis C

bioRxiv (2024) [ DOI: 10.1101/2024.03.06.583760 ]

Image sets:

Motion corrected micrographs of alpha-LTX
Unaligned Falcon 4i movies in Electron Event Representation (EER)
Particle Coordinates of the aLTX Pore state in Sphire .box format
Particle Coordinates of the aLTX prepore state in Sphire .box format

[Show more]

EMPIAR-12800

Release date: Sept. 4, 2025
Dataset size: 492.9 GB
Experiment type: EMDB

Broggini L, Chaves-Sanjuan A, Ricagno S

To Be Published

Image sets:

Particle stack of the final reconstructed ANP amyloids from left atrial appendage of atrial fibrillation patient - polymorph B
Particle stack of the final reconstructed ANP amyloids from left atrial appendage of atrial fibrillation patient - polymorph A
Initial particle stack extracted form start to end picking

EMPIAR-12519

Release date: Aug. 5, 2025
Dataset size: 2.4 TB
Experiment type: EMDB

Jia M, Wang Y, He J, Chou SH, Luo D, Fang L, Hou J, Fan Y, Zhang W, Chen H, Zhou D, Liu Y, Feng Y, Koopal L, Tan W

Soil Biology and Biochemistry (2025) 210 [ DOI: 10.1016/j.soilbio.2025.109908 ]

Image sets:

Gain reference for cryo electron micrographs of glomalin (a group I chaperonin) from Rhizophagus irregularis BGC BJ09
Particles for cryo electron micrographs of glomalin (a group I chaperonin) from Rhizophagus irregularis BGC BJ09
Cryo electron micrographs of glomalin (a group I chaperonin) from Rhizophagus irregularis BGC BJ09

EMPIAR-12890

Release date: Aug. 4, 2025
Dataset size: 18.1 GB
Experiment type: EMDB

Burger D, Kashyrina M, Lewis AJ, De Nuccio F, Mohammed I, de La Seiglière H, van den Heuvel L, Verchère J, Feuillie C, Berbon M, Arotçarena M, Retailleau A, Bezard E, Laferrière F, Loquet A, Bousset L, Baron T, Lofrumento DD, De Giorgi F, Stahlberg H, Ichas F

bioRxiv (2024) [ DOI: 10.1101/2024.07.01.601498 ]

Image sets:

Motion-corrected micrographs (MRC), pre-selected manually for the presence of twisting fibrils.
Extracted particles of manually picked fibrils (box size 800, binning 2, inter-box distance of 14.4A).
Unaligned multi-frame micrographs (EER), pre-selected manually for the presence of twisting fibrils.

EMPIAR-12568

Release date: July 25, 2025
Dataset size: 1.3 TB
Experiment type: EMDB

Wang Y, Wu J, Yang S, Li X, Wang J, Lv Q, Zhu X, Lu G, Zhang J, Shen W, Liu B, Lin J, Dong A

bioRxiv (2024) [ DOI: 10.1101/2024.12.03.626673 ]

Image sets:

Particles for cryo electron micrographs of Arabidopsis thaliana H2A.W-nucleosome with Arabidopsis native 147bp DNA 15.2.2
Cryo electron micrographs of Arabidopsis thaliana H2A.W-nucleosome with Arabidopsis native 147bp DNA 15.2.2

Filter By

Current Database

Current status

Release Date

Author by name

Chaves-sanjuan A [5]
Berlinguer M [4]
Bolognesi M [4]
Morris KL [4]
Wang Y [4]
Dong A [3]
Armache JP [2]
Avila Ibarra A [2]
Baker M [2]
Buffalo CZ [2]
Bücker R [2]
Cameron AD [2]
Cazey C [2]
Cheng Y [2]
Chiu W [2]
Desormeaux A [2]
Finzi A [2]
Garcia-alai M [2]
Grünewald K [2]
Gu C [2]
Halebian M [2]
Herschhorn A [2]
Hurley JH [2]
Jones JR [2]
Lamour VL [2]
Landau M [2]
Liu Y [2]
Maduke M [2]
Mao Y [2]
Noble AJ [2]
Pintilie G [2]
Sessions RB [2]
Seuring C [2]
Smith CJ [2]
Sodroski JG [2]
Stahlberg H [2]
Veith K [2]
Vidmar VV [2]
Wang L [2]
Weixlbaumer AW [2]
Wu S [2]
Xiang SH [2]
Xu M [2]
Acebron I [1]
Antermite D [1]
Arotcarena M. [1]
Baron T [1]
Bell TA [1]
Bepler T [1]
Berbon M [1]
Berger B [1]
Bezard E [1]
Biyani N [1]
Blikstad C [1]
Bock LV [1]
Borkowski B [1]
Boskovic J [1]
Bousset L [1]
Brasch J [1]
Broggini L [1]
Bull JA [1]
Burger D [1]
Canron M [1]
Carragher B [1]
Chami M [1]
Chen J [1]
Chen ZJ [1]
Clarke OB [1]
Coleman JA [1]
Daneshparvar N [1]
Darst SA [1]
Davis JH [1]
De Giorgi F [1]
De Nuccio F [1]
Deng Y [1]
Feuillie C [1]
Fischer N [1]
Gao Y [1]
Gatsogiannis C [1]
Gaullier G [1]
Gouaux E [1]
Grubmueller H [1]
He X [1]
Hofmann S [1]
Hou F [1]
Hu Z [1]
Huang L [1]
Hummer G [1]
Ichas F [1]
Januliene D [1]
Jensen GJ [1]
Jia M [1]
Jiang QX [1]
Kalyankumar KS [1]
Kang JY [1]
Kashyrina M [1]
Klink B [1]
Konevega AL [1]
Laferriere F [1]
Laughlin T [1]

Journal

EMPIAR Experiment type

EMPIAR Image category

External links

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