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natural_source_ncbi_code:"946362"

Filter By

Current Database

  • EMDB [38]

Current status

  • REL [38]

Sample type

  • Complex [35]
  • Protein [35]
  • Ligand [14]
  • Cellular component [3]

Organism

  • Salpingoeca rosetta (strain atcc 50818 / bsb-021) [38]

EM Method

  • Single-particle [35]
  • Tomography [3]

Resolution

  • < 2Å [2]
  • ≥ 2Å and < 3Å [16]
  • ≥ 3Å and < 4Å [15]
  • ≥ 4Å and < 5Å [2]
  • ≥ 20Å and < 30Å [2]

Model molecular weight

  • 250-500 kDa [1]
  • 500-1000 kDa [14]

Release Date

  • 2025 [1]
  • 2024 [34]
  • 2022 [3]

Author by name

  • Du J [34]
  • Huang Y [34]
  • Kumar S [34]
  • Lee J [34]
  • Lu W [34]
  • Nicastro D [3]
  • Pinskey JM [3]
  • Connolly SM [1]
  • Gulsevin A [1]
  • Han B [1]
  • Karakas E [1]
  • Kenworthy AK [1]
  • Meiler J [1]
  • Ohi MD [1]
  • Schultz DT [1]
  • Sushant K [1]
  • Wilson LFL [1]

Author by ORCID

  • Kumar S [34]
  • Lu W [34]
  • Lee J [34]
  • Du J [34]
  • Pinskey JM [1]
  • Wilson LFL [1]
  • Karakas E [1]
  • Kenworthy AK [1]
  • Han B [1]
  • Connolly SM [1]
  • Meiler J [1]
  • Nicastro D [1]
  • Gulsevin A [1]
  • Schultz DT [1]
  • Ohi MD [1]

Journal

  • NAT STRUCT MOL BIOL [34]
  • ELIFE [3]
  • J CELL BIOL [1]

Microscope

  • FEI TITAN KRIOS [36]
  • FEI TALOS ARCTICA [2]

Electron Source

  • FIELD EMISSION GUN [38]

Film or detector model

  • GATAN K3 BIOQUANTUM 6K X 4K [30]
  • GATAN K2 SUMMIT 4K X 4K [7]
  • GATAN K3 BIOCONTINUUM 6K X 4K [1]

External links

  • PDB [15]
  • Pfam [15]
  • UniProt [15]
  • ChEBI [14]
  • ChEMBL [14]
  • DrugBank [14]
  • InterPro [14]
  • PDBe-Kb [14]
  • Gene Ontology [13]
  • AlphaFold DB [1]
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Showing 1 - 10 of 38. Page 1 of 4
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EMD-47023
Download Map
3D View
CryoEM structure of the Salpingoeca rosetta caveolin complex
Release date: July 9, 2025
Resolution: 2.9 Å
EM Method: Single-particle
Fitted PDBs: 9dn1
Q-score: 0.588

Han B, Connolly SM, Schultz DT, Wilson LFL, Gulsevin A, Meiler J, Karakas E, Ohi MD, Kenworthy AK

J Cell Biol (2025) 224 [ DOI: doi:10.1083/jcb.202411175 Pubmed: 40772930 ]

EMD-40865
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3D View
NUDT9-H domain focused cryo-EM map of TRPM2 chanzyme in the presence of Calcium and ADP-ribose
Release date: May 29, 2024
Resolution: 3.69 Å
EM Method: Single-particle

Huang Y, Kumar S, Lee J, Lu W, Du J

Nat Struct Mol Biol (2024) 31 pp. 1509-1521 [ DOI: doi:10.1038/s41594-024-01316-4 Pubmed: 38773335 ]

EMD-40866
Download Map
3D View
NUDT9-H domain focused cryo-EM map of TRPM2 chanzyme in the presence of Magnesium, Adenosine monophosphate, and Ribose-5-phosphate
Release date: May 29, 2024
Resolution: 2.8 Å
EM Method: Single-particle

Huang Y, Kumar S, Lee J, Lu W, Du J

Nat Struct Mol Biol (2024) 31 pp. 1509-1521 [ DOI: doi:10.1038/s41594-024-01316-4 Pubmed: 38773335 ]

EMD-40867
Download Map
3D View
NUDT9-H domain focused cryo-EM map of TRPM2 chanzyme in the presence of Magnesium, Adenosine monophosphate, and Ribose-5-phosphate
Release date: May 29, 2024
Resolution: 3.83 Å
EM Method: Single-particle

Huang Y, Kumar S, Lee J, Lu W, Du J

Nat Struct Mol Biol (2024) 31 pp. 1509-1521 [ DOI: doi:10.1038/s41594-024-01316-4 Pubmed: 38773335 ]

EMD-40868
Download Map
3D View
NUDT9-H domain focused cryo-EM map of TRPM2 chanzyme in the presence of Magnesium and ADP-ribose, open state
Release date: May 29, 2024
Resolution: 3.13 Å
EM Method: Single-particle

Huang Y, Kumar S, Lee J, Lu W, Du J

Nat Struct Mol Biol (2024) 31 pp. 1509-1521 [ DOI: doi:10.1038/s41594-024-01316-4 Pubmed: 38773335 ]

EMD-40869
Download Map
3D View
NUDT9-H domain focused cryo-EM map of TRPM2 chanzyme in the presence of Magnesium and ADP-ribose, closed state
Release date: May 29, 2024
Resolution: 2.8 Å
EM Method: Single-particle

Huang Y, Kumar S, Lee J, Lu W, Du J

Nat Struct Mol Biol (2024) 31 pp. 1509-1521 [ DOI: doi:10.1038/s41594-024-01316-4 Pubmed: 38773335 ]

EMD-40870
Download Map
3D View
NUDT9-H domain focused cryo-EM map of TRPM2 chanzyme in the presence of Magnesium, ADP-ribose, Adenosine monophosphate, and Ribose-5-phosphate, closed state
Release date: May 29, 2024
Resolution: 2.8 Å
EM Method: Single-particle

Huang Y, Kumar S, Lee J, Lu W, Du J

Nat Struct Mol Biol (2024) 31 pp. 1509-1521 [ DOI: doi:10.1038/s41594-024-01316-4 Pubmed: 38773335 ]

EMD-40871
Download Map
3D View
NUDT9-H domain focused cryo-EM map of TRPM2 chanzyme E1114A in the presence of Magnesium and ADP-ribose, open state
Release date: May 29, 2024
Resolution: 4.08 Å
EM Method: Single-particle

Huang Y, Kumar S, Lee J, Lu W, Du J

Nat Struct Mol Biol (2024) 31 pp. 1509-1521 [ DOI: doi:10.1038/s41594-024-01316-4 Pubmed: 38773335 ]

EMD-40872
Download Map
3D View
NUDT9-H domain focused cryo-EM map of TRPM2 chanzyme E1114A in the presence of Magnesium and ADP-ribose, closed state
Release date: May 29, 2024
Resolution: 3.27 Å
EM Method: Single-particle

Huang Y, Kumar S, Lee J, Lu W, Du J

Nat Struct Mol Biol (2024) 31 pp. 1509-1521 [ DOI: doi:10.1038/s41594-024-01316-4 Pubmed: 38773335 ]

EMD-40875
Download Map
3D View
Raw consensus map of TRPM2 chanzyme in the presence of Magnesium, Adenosine monophosphate, and Ribose-5-phosphate
Release date: May 29, 2024
Resolution: 1.97 Å
EM Method: Single-particle

Huang Y, Kumar S, Lee J, Lu W, Du J

Nat Struct Mol Biol (2024) 31 pp. 1509-1521 [ DOI: doi:10.1038/s41594-024-01316-4 Pubmed: 38773335 ]

Sort by: Download
Showing 1 - 10 of 38. Page 1 of 4
Display:
Statistics
×

Download











































Preview first 10
Download

Filter By

Current Database

  • EMDB [38]

Current status

  • REL [38]

Sample type

  • Complex [35]
  • Protein [35]
  • Ligand [14]
  • Cellular component [3]

Organism

  • Salpingoeca rosetta (strain atcc 50818 / bsb-021) [38]

EM Method

  • Single-particle [35]
  • Tomography [3]

Resolution

  • < 2Å [2]
  • ≥ 2Å and < 3Å [16]
  • ≥ 3Å and < 4Å [15]
  • ≥ 4Å and < 5Å [2]
  • ≥ 20Å and < 30Å [2]

Model molecular weight

  • 250-500 kDa [1]
  • 500-1000 kDa [14]

Release Date

  • 2025 [1]
  • 2024 [34]
  • 2022 [3]

Author by name

  • Du J [34]
  • Huang Y [34]
  • Kumar S [34]
  • Lee J [34]
  • Lu W [34]
  • Nicastro D [3]
  • Pinskey JM [3]
  • Connolly SM [1]
  • Gulsevin A [1]
  • Han B [1]
  • Karakas E [1]
  • Kenworthy AK [1]
  • Meiler J [1]
  • Ohi MD [1]
  • Schultz DT [1]
  • Sushant K [1]
  • Wilson LFL [1]

Author by ORCID

  • Kumar S [34]
  • Lu W [34]
  • Lee J [34]
  • Du J [34]
  • Pinskey JM [1]
  • Wilson LFL [1]
  • Karakas E [1]
  • Kenworthy AK [1]
  • Han B [1]
  • Connolly SM [1]
  • Meiler J [1]
  • Nicastro D [1]
  • Gulsevin A [1]
  • Schultz DT [1]
  • Ohi MD [1]

Journal

  • NAT STRUCT MOL BIOL [34]
  • ELIFE [3]
  • J CELL BIOL [1]

Microscope

  • FEI TITAN KRIOS [36]
  • FEI TALOS ARCTICA [2]

Electron Source

  • FIELD EMISSION GUN [38]

Film or detector model

  • GATAN K3 BIOQUANTUM 6K X 4K [30]
  • GATAN K2 SUMMIT 4K X 4K [7]
  • GATAN K3 BIOCONTINUUM 6K X 4K [1]

External links

  • PDB [15]
  • Pfam [15]
  • UniProt [15]
  • ChEBI [14]
  • ChEMBL [14]
  • DrugBank [14]
  • InterPro [14]
  • PDBe-Kb [14]
  • Gene Ontology [13]
  • AlphaFold DB [1]