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natural_source_ncbi_code:"696871"

Filter By

Current Database

  • EMDB [13]

Current status

  • REL [13]

Sample type

  • Protein [8]
  • Virus [8]
  • Complex [5]
  • Ligand [2]

Organism

  • Vaccinia virus [13]
  • Vaccinia virus [3]
  • Vaccinia virus [2]
  • Homo sapiens [2]

EM Method

  • Single-particle [8]
  • Subtomogram averaging [3]
  • Tomography [2]

Resolution

  • ≥ 2Å and < 3Å [1]
  • ≥ 3Å and < 4Å [4]
  • ≥ 4Å and < 5Å [1]
  • ≥ 6Å and < 8Å [2]
  • ≥ 8Å and < 12Å [1]
  • ≥ 12Å and < 16Å [1]
  • ≥ 20Å and < 30Å [1]

Model molecular weight

  • 50-100 kDa [1]
  • 100-250 kDa [7]

Release Date

  • 2025 [2]
  • 2024 [8]
  • 2022 [3]

Author by name

  • Bauer LW [6]
  • Datler J [6]
  • Hansen JM [6]
  • Hodirnau VV [6]
  • Schloegl A [6]
  • Schlogl A [6]
  • Schur FKM [6]
  • Thader A [6]
  • Arribas-bosacoma R [3]
  • Boskovic J [3]
  • Escudero-bravo P [3]
  • Fernandez-leiro R [3]
  • Llorca O [3]
  • Oliver AW [3]
  • Pearl LH [3]
  • Rivera-calzada A [3]
  • Ruiz-ramos A [3]
  • Albericio G [2]
  • Bamford R [2]
  • Battini L [2]
  • Broutin M [2]
  • Buchrieser J [2]
  • Chappert P [2]
  • Delgado P [2]
  • Duan M [2]
  • Esteban M [2]
  • Gallien S [2]
  • Gao GF [2]
  • Garcia-arriaza J [2]
  • Gil M [2]
  • Guardado-calvo P [2]
  • Guivel-benhassine F [2]
  • Haouz A [2]
  • Hub JS [2]
  • Hubert M [2]
  • Lafaye P [2]
  • Liu S [2]
  • Liu Y [2]
  • Mahevas M [2]
  • Martinez Leon A [2]
  • Meola A [2]
  • Mercer J [2]
  • Noriega MA [2]
  • Pokorny L [2]
  • Porrot F [2]
  • Postal J [2]
  • Qu X [2]
  • Schwartz O [2]
  • Shi X [2]
  • Shi Y [2]
  • Vernuccio R [2]
  • Hansen J [1]

Author by ORCID

  • Hansen JM [6]
  • Datler J [6]
  • Schlogl A [6]
  • Hodirnau VV [6]
  • Schur FKM [6]
  • Llorca O [3]
  • Boskovic J [3]
  • Arribas-bosacoma R [3]
  • Oliver AW [3]
  • Pearl LH [3]
  • Fernandez-leiro R [3]
  • Rivera-calzada A [3]
  • Guardado-calvo P [2]
  • Hubert M [2]
  • Buchrieser J [2]
  • Postal J [2]
  • Vernuccio R [2]

Journal

  • NAT STRUCT MOL BIOL [6]
  • NAT COMMUN [3]
  • CELL [2]
  • TO BE PUBLISHED [2]

Software

  • CRYOSPARC [6]
  • RELION [6]
  • DYNAMO [3]
  • IMOD [2]

Microscope

  • FEI TITAN KRIOS [11]
  • TFS KRIOS [2]

Electron Source

  • FIELD EMISSION GUN [13]

Film or detector model

  • GATAN K3 BIOQUANTUM 6K X 4K [6]
  • GATAN K3 6K X 4K [3]
  • FEI FALCON IV 4K X 4K [2]
  • GATAN K3 BIOCONTINUUM 6K X 4K [1]
  • TFS FALCON 4I 4K X 4K [1]

External links

  • PDB [8]
  • PDBe-Kb [8]
  • Pfam [8]
  • UniProt [8]
  • Gene Ontology [7]
  • InterPro [6]
  • AlphaFold DB [2]
  • ChEBI [2]
  • ChEMBL [2]
  • Complex Portal [2]
Sort by: Download
Showing 1 - 10 of 13. Page 1 of 2
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EMD-52019
Download Map
3D View
Structure of A16/G9 in complex with A56/K2 vaccinia virus
Release date: Sept. 3, 2025
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 9hbk
Q-score: 0.356

Meola A, Vernuccio R, Battini L, Albericio G, Delgado P, Bamford R, Pokorny L, Broutin M, Martinez Leon A, Gallien S, Gil M, Noriega MA, Guivel-Benhassine F, Porrot F, Postal J, Buchrieser J, Hubert M, Haouz A, Lafaye P, Esteban M, Hub JS, Mahevas M, Chappert P, Mercer J, Garcia-Arriaza J, Schwartz O, Guardado-Calvo P

Cell (2025) 188 pp. 6266- [ Pubmed: 40865523 DOI: doi:10.1016/j.cell.2025.07.040 ]

EMD-53936
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3D View
Structure of A16/G9 in complex with A56/K2 at pH 5.5 vaccinia virus
Release date: Sept. 3, 2025
Resolution: 4.0 Å
EM Method: Single-particle
Fitted PDBs: 9rdh
Q-score: 0.261

Meola A, Vernuccio R, Battini L, Albericio G, Delgado P, Bamford R, Pokorny L, Broutin M, Martinez Leon A, Gallien S, Gil M, Noriega MA, Guivel-Benhassine F, Porrot F, Postal J, Buchrieser J, Hubert M, Haouz A, Lafaye P, Esteban M, Hub JS, Mahevas M, Chappert P, Mercer J, Garcia-Arriaza J, Schwartz O, Guardado-Calvo P

Cell (2025) 188 pp. 6266- [ Pubmed: 40865523 DOI: doi:10.1016/j.cell.2025.07.040 ]

EMD-37456
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3D View
Structural organization of the palisade layer in isolated vaccinia virus cores
Release date: Sept. 18, 2024
Resolution: 10.0 Å
EM Method: Subtomogram averaging
Fitted PDBs: 8wd7
Q-score: 0.01

Liu Y, Qu X, Duan M, Shi X, Liu S, Shi Y, Gao GF

To Be Published

EMD-37461
Download Map
3D View
Structural organization of the palisade layer in intracellular mature vaccinia virions
Release date: Sept. 18, 2024
Resolution: 7.7 Å
EM Method: Subtomogram averaging
Fitted PDBs: 8wdc
Q-score: 0.01

Liu Y, Qu X, Duan M, Shi X, Liu S, Shi Y, Gao GF

To Be Published

EMD-17412
Download Map
3D View
Vaccinia Virus flower-shaped pore-like structure
Release date: Feb. 21, 2024
Resolution: 7.2 Å
EM Method: Single-particle

Datler J, Hansen JM, Thader A, Schlogl A, Bauer LW, Hodirnau VV, Schur FKM

Nat Struct Mol Biol (2024) 31 pp. 1114-1123 [ DOI: doi:10.1038/s41594-023-01201-6 Pubmed: 38316877 ]

EMD-17410
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3D View
Vaccinia Virus palisade layer A10 trimer
Release date: Jan. 17, 2024
Resolution: 3.8 Å
EM Method: Single-particle
Fitted PDBs: 8p4k
Q-score: 0.215

Datler J, Hansen JM, Thader A, Schlogl A, Bauer LW, Hodirnau VV, Schur FKM

Nat Struct Mol Biol (2024) 31 pp. 1114-1123 [ DOI: doi:10.1038/s41594-023-01201-6 Pubmed: 38316877 ]

EMD-17411
Download Map
3D View
Subtomogram averaging structure of the Vaccinia Virus core palisade layer
Release date: Jan. 17, 2024
Resolution: 13.1 Å
EM Method: Subtomogram averaging

Datler J, Hansen JM, Thader A, Schlogl A, Bauer LW, Hodirnau VV, Schur FKM

Nat Struct Mol Biol (2024) 31 pp. 1114-1123 [ DOI: doi:10.1038/s41594-023-01201-6 Pubmed: 38316877 ]

EMD-17413
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3D View
Cryo-electron tomogram of intact mature Vaccinia Virus particle
Release date: Jan. 17, 2024
EM Method: Tomography

Datler J, Hansen JM, Thader A, Schlogl A, Bauer LW, Hodirnau VV, Schur FKM

Nat Struct Mol Biol (2024) 31 pp. 1114-1123 [ DOI: doi:10.1038/s41594-023-01201-6 Pubmed: 38316877 ]

EMD-17414
Download Map
3D View
Cryo-electron tomogram of isolated Vaccinia Virus cores
Release date: Jan. 17, 2024
EM Method: Tomography

Datler J, Hansen JM, Thader A, Schlogl A, Bauer LW, Hodirnau VV, Schur FKM

Nat Struct Mol Biol (2024) 31 pp. 1114-1123 [ DOI: doi:10.1038/s41594-023-01201-6 Pubmed: 38316877 ]

EMD-18452
Download Map
3D View
Vaccinia virus inner core wall
Release date: Jan. 17, 2024
Resolution: 20.7 Å
EM Method: Single-particle

Datler J, Hansen JM, Thader A, Schlogl A, Bauer LW, Hodirnau VV, Schur FKM

Nat Struct Mol Biol (2024) 31 pp. 1114-1123 [ DOI: doi:10.1038/s41594-023-01201-6 Pubmed: 38316877 ]

Sort by: Download
Showing 1 - 10 of 13. Page 1 of 2
Display:
Statistics
×

Download











































Preview first 10
Download

Filter By

Current Database

  • EMDB [13]

Current status

  • REL [13]

Sample type

  • Protein [8]
  • Virus [8]
  • Complex [5]
  • Ligand [2]

Organism

  • Vaccinia virus [13]
  • Vaccinia virus [3]
  • Vaccinia virus [2]
  • Homo sapiens [2]

EM Method

  • Single-particle [8]
  • Subtomogram averaging [3]
  • Tomography [2]

Resolution

  • ≥ 2Å and < 3Å [1]
  • ≥ 3Å and < 4Å [4]
  • ≥ 4Å and < 5Å [1]
  • ≥ 6Å and < 8Å [2]
  • ≥ 8Å and < 12Å [1]
  • ≥ 12Å and < 16Å [1]
  • ≥ 20Å and < 30Å [1]

Model molecular weight

  • 50-100 kDa [1]
  • 100-250 kDa [7]

Release Date

  • 2025 [2]
  • 2024 [8]
  • 2022 [3]

Author by name

  • Bauer LW [6]
  • Datler J [6]
  • Hansen JM [6]
  • Hodirnau VV [6]
  • Schloegl A [6]
  • Schlogl A [6]
  • Schur FKM [6]
  • Thader A [6]
  • Arribas-bosacoma R [3]
  • Boskovic J [3]
  • Escudero-bravo P [3]
  • Fernandez-leiro R [3]
  • Llorca O [3]
  • Oliver AW [3]
  • Pearl LH [3]
  • Rivera-calzada A [3]
  • Ruiz-ramos A [3]
  • Albericio G [2]
  • Bamford R [2]
  • Battini L [2]
  • Broutin M [2]
  • Buchrieser J [2]
  • Chappert P [2]
  • Delgado P [2]
  • Duan M [2]
  • Esteban M [2]
  • Gallien S [2]
  • Gao GF [2]
  • Garcia-arriaza J [2]
  • Gil M [2]
  • Guardado-calvo P [2]
  • Guivel-benhassine F [2]
  • Haouz A [2]
  • Hub JS [2]
  • Hubert M [2]
  • Lafaye P [2]
  • Liu S [2]
  • Liu Y [2]
  • Mahevas M [2]
  • Martinez Leon A [2]
  • Meola A [2]
  • Mercer J [2]
  • Noriega MA [2]
  • Pokorny L [2]
  • Porrot F [2]
  • Postal J [2]
  • Qu X [2]
  • Schwartz O [2]
  • Shi X [2]
  • Shi Y [2]
  • Vernuccio R [2]
  • Hansen J [1]

Author by ORCID

  • Hansen JM [6]
  • Datler J [6]
  • Schlogl A [6]
  • Hodirnau VV [6]
  • Schur FKM [6]
  • Llorca O [3]
  • Boskovic J [3]
  • Arribas-bosacoma R [3]
  • Oliver AW [3]
  • Pearl LH [3]
  • Fernandez-leiro R [3]
  • Rivera-calzada A [3]
  • Guardado-calvo P [2]
  • Hubert M [2]
  • Buchrieser J [2]
  • Postal J [2]
  • Vernuccio R [2]

Journal

  • NAT STRUCT MOL BIOL [6]
  • NAT COMMUN [3]
  • CELL [2]
  • TO BE PUBLISHED [2]

Software

  • CRYOSPARC [6]
  • RELION [6]
  • DYNAMO [3]
  • IMOD [2]

Microscope

  • FEI TITAN KRIOS [11]
  • TFS KRIOS [2]

Electron Source

  • FIELD EMISSION GUN [13]

Film or detector model

  • GATAN K3 BIOQUANTUM 6K X 4K [6]
  • GATAN K3 6K X 4K [3]
  • FEI FALCON IV 4K X 4K [2]
  • GATAN K3 BIOCONTINUUM 6K X 4K [1]
  • TFS FALCON 4I 4K X 4K [1]

External links

  • PDB [8]
  • PDBe-Kb [8]
  • Pfam [8]
  • UniProt [8]
  • Gene Ontology [7]
  • InterPro [6]
  • AlphaFold DB [2]
  • ChEBI [2]
  • ChEMBL [2]
  • Complex Portal [2]