Edit your search query here and hit Return to execute it:
natural_source_ncbi_code:"5691"

Filter By

Current Database

  • EMDB [37]

Current status

  • REL [37]

Sample type

  • Complex [19]
  • Protein [16]
  • Cellular component [14]
  • Sample [8]
  • Ligand [7]
  • RNA [7]
  • Cell [4]

Organism

  • Trypanosoma brucei [37]
  • Trypanosoma brucei [4]
  • Thermoplasma acidophilum [3]
  • Homo sapiens [1]

EM Method

  • Single-particle [19]
  • Subtomogram averaging [12]
  • Tomography [6]

Resolution

  • ≥ 2Å and < 3Å [2]
  • ≥ 3Å and < 4Å [14]
  • ≥ 5Å and < 6Å [1]
  • ≥ 8Å and < 12Å [2]
  • ≥ 16Å and < 20Å [4]
  • ≥ 20Å and < 30Å [2]
  • ≥ 30Å [3]

Model molecular weight

  • 50-100 kDa [1]
  • 100-250 kDa [3]
  • 250-500 kDa [4]
  • 500-1000 kDa [7]
  • 2-5 MDa [2]

Release Date

  • 2024 [6]
  • 2023 [10]
  • 2022 [2]
  • 2020 [5]
  • 2018 [3]
  • 2017 [3]
  • 2013 [1]
  • 2011 [7]

Author by name

  • He CY [12]
  • Chiu W [10]
  • Schmid MF [10]
  • Wang H [10]
  • Zhou ZH [10]
  • Aphasizhev R [7]
  • Aphasizheva I [7]
  • Sun SY [7]
  • Alvarez-cabrera AL [6]
  • Hu JJ [6]
  • Huang L [6]
  • Lee JKJ [6]
  • Li X [6]
  • Li Z [6]
  • Liu Q [6]
  • Liu S [6]
  • Suematsu T [6]
  • Yu C [6]
  • Zhang F [6]
  • Zhang L [6]
  • Zhao X [6]
  • Chen M [5]
  • Dong X [5]
  • Fu CJ [5]
  • Gheiratmand L [5]
  • Huang D [5]
  • Khant HA [5]
  • Koyfman AY [5]
  • Hill KL [4]
  • Jonnalagadda K [4]
  • Pelayo P [4]
  • Sha J [4]
  • Shimogawa MM [4]
  • Szombathy N [4]
  • Vadakkan S [4]
  • Wijono AS [4]
  • Wohlschlegel J [4]
  • Zhang J [4]
  • Afanasyev P [3]
  • Blaza JN [3]
  • Blundell TL [3]
  • Carazo JM [3]
  • Carrington M [3]
  • Castro-hartmann P [3]
  • Chaitanya Vedithi S [3]
  • Cheng Y [3]
  • Chirgadze DY [3]
  • Coffino P [3]
  • Corey RA [3]
  • Dougherty M [3]
  • Gragera M [3]
  • Gusach A [3]
  • Kaelber JT [3]
  • Lim CT [3]
  • Matusevicius M [3]
  • Melero R [3]
  • Murshudov G [3]
  • Myasnikov AG [3]
  • Nematbakhsh Y [3]
  • Sansom M [3]
  • Shi J [3]
  • Sprenger T [3]
  • Stansfeld P [3]
  • Tate CG [3]
  • Ungogo MA [3]
  • Wang F [3]
  • Warshamanage R [3]
  • Weyand SN [3]
  • Yamashita K [3]
  • Yu Y [3]
  • Yu Z [3]
  • De Koning Hp [3]
  • Boehm C [2]
  • Brecht M [2]
  • Dai W [2]
  • Effenberger K [2]
  • Goeringer HU [2]
  • Golas MM [2]
  • Huang Y [2]
  • Jonasch D [2]
  • Lim TK [2]
  • Lin Q [2]
  • Ludtke SJ [2]
  • Sander B [2]
  • Stark H [2]
  • Aibara S [1]
  • Alfonzo JD [1]
  • Amunts A [1]
  • Bajaj C [1]
  • Baradaran R [1]
  • Buss SN [1]
  • Chopra N [1]
  • Davies KM [1]
  • Dewar CE [1]
  • Dolce LG [1]
  • Fernandez-tornero C [1]
  • Frank J [1]
  • Fu J [1]
  • Gahura O [1]
  • Gestwicki JE [1]

Author by ORCID

  • Zhou ZH [10]
  • Chiu W [10]
  • Schmid MF [10]
  • Alvarez-cabrera AL [6]
  • Lee JKJ [6]
  • Liu S [6]
  • Hu JJ [6]
  • Zhang F [6]
  • Yu C [6]
  • Huang L [6]
  • Aphasizhev R [6]
  • Li Z [6]
  • Wang H [6]
  • Suematsu T [6]
  • Li X [6]
  • Zhang L [6]
  • Aphasizheva I [6]
  • Shimogawa MM [4]
  • Hill KL [4]
  • Wang H [4]
  • Zhang J [4]
  • Jonnalagadda K [4]
  • Yu Z [3]
  • Kaelber JT [3]
  • Cheng Y [3]
  • Wang F [3]
  • He CY [2]
  • Dong X [2]
  • Lim TK [2]
  • Sander B [2]
  • Lin Q [2]
  • Ludtke SJ [2]
  • Jonasch D [2]
  • Chen M [2]
  • Golas MM [2]
  • Huang Y [2]
  • Fernandez-tornero C [1]
  • Gull K [1]
  • Tobiasson V [1]
  • Hoenger A [1]
  • Dewar CE [1]
  • Muhleip AW [1]
  • Kuhlbrandt W [1]
  • Rubio MAT [1]
  • De La Pena Ah [1]
  • Gahura O [1]
  • Davies KM [1]
  • Williams SK [1]
  • Opoku-nsiah KA [1]
  • Amunts A [1]
  • Baradaran R [1]
  • Gestwicki JE [1]
  • Tengo L [1]
  • Weis F [1]
  • Alfonzo JD [1]
  • Zikova A [1]
  • Bajaj C [1]
  • Des Georges A [1]
  • Kowalinski E [1]
  • Sali A [1]
  • Dolce LG [1]
  • Madison-antenucci S [1]
  • Schnaufer A [1]
  • Hoog JL [1]
  • Aibara S [1]
  • Lander GC [1]

Journal

  • NAT COMMUN [9]
  • PNAS [9]
  • SCIENCE [6]
  • ELIFE [4]
  • EMBO J [3]
  • NAT METHODS [2]
  • SCI ADV [2]
  • NATURE [1]
  • STRUCTURE [1]

Software

  • IMOD [9]
  • PEET [5]
  • CRYOSPARC [4]
  • GCTF [3]
  • EMAN [2]
  • EMAN2 [2]
  • 3DMOD [1]
  • CHIMERA [1]
  • RELION [1]
  • SPIDER [1]

Microscope

  • FEI TITAN KRIOS [22]
  • JEOL 2100 [5]
  • JEOL 2200FS [3]
  • FEI TALOS ARCTICA [2]
  • FEI/PHILIPS CM200FEG [2]
  • FEI POLARA 300 [1]
  • FEI TECNAI F20 [1]
  • FEI TECNAI F30 [1]

Electron Source

  • FIELD EMISSION GUN [32]
  • LAB6 [5]

Film or detector model

  • GATAN K2 SUMMIT 4K X 4K [11]
  • GATAN K3 6K X 4K [9]
  • GATAN K3 BIOQUANTUM 6K X 4K [3]
  • DIRECT ELECTRON DE-12 4K X 3K [2]
  • FEI FALCON II 4K X 4K [2]
  • GATAN ULTRASCAN 4000 4K X 4K [2]
  • KODAK SO-163 FILM [1]

External links

  • PDB [17]
  • AlphaFold DB [16]
  • Gene Ontology [16]
  • InterPro [16]
  • PDBe-Kb [16]
  • UniProt [16]
  • Pfam [14]
  • DrugBank [6]
  • ChEBI [5]
  • ChEMBL [5]
  • Complex Portal [1]
  • EMPIAR [1]
  • SCOP2 [1]
Sort by: Download
Showing 1 - 10 of 37. Page 1 of 4
Display:
Statistics
×

Download











































Preview first 10
Download
EMD-16862
Download Map
3D View
Molecular Mechanism of trypanosomal AQP2
Release date: Oct. 2, 2024
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 8ofx
Q-score: 0.558

Matusevicius M, Corey RA, Gragera M, Yamashita K, Sprenger T, Ungogo MA, Blaza JN, Castro-Hartmann P, Chirgadze DY, Chaitanya Vedithi S, Afanasyev P, Melero R, Warshamanage R, Gusach A, Carazo JM, Carrington M, Blundell TL, Murshudov G, Stansfeld P, Sansom M, de Koning HP, Tate CG, Weyand SN

eLife (2025) [ DOI: doi:10.7554/elife.107460.1 ]

EMD-16863
Download Map
3D View
Molecular Mechanism of trypanosomal AQP2
Release date: Oct. 2, 2024
Resolution: 3.7 Å
EM Method: Single-particle
Fitted PDBs: 8ofy
Q-score: 0.471

Matusevicius M, Corey RA, Gragera M, Yamashita K, Sprenger T, Ungogo MA, Blaza JN, Castro-Hartmann P, Chirgadze DY, Chaitanya Vedithi S, Afanasyev P, Melero R, Warshamanage R, Gusach A, Carazo JM, Carrington M, Blundell TL, Murshudov G, Stansfeld P, Sansom M, de Koning HP, Tate CG, Weyand SN

eLife (2025) [ DOI: doi:10.7554/elife.107460.1 ]

EMD-16864
Download Map
3D View
Molecular Mechanism of trypanosomal AQP2
Release date: Oct. 2, 2024
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 8ofz
Q-score: 0.556

Matusevicius M, Corey RA, Gragera M, Yamashita K, Sprenger T, Ungogo MA, Blaza JN, Castro-Hartmann P, Chirgadze DY, Chaitanya Vedithi S, Afanasyev P, Melero R, Warshamanage R, Gusach A, Carazo JM, Carrington M, Blundell TL, Murshudov G, Stansfeld P, Sansom M, de Koning HP, Tate CG, Weyand SN

eLife (2025) [ DOI: doi:10.7554/elife.107460.1 ]

EMD-45648
Download Map
3D View
Representative cryo electron tomography reconstructions showing central pair microtubule alignment in a wild type Trypanosoma brucei cell
Release date: Sept. 11, 2024
Resolution: 11.02 Å
EM Method: Tomography

Huang Y, Dong X, Sun SY, Lim TK, Lin Q, He CY

Sci Adv (2024) 10 pp. eadq2950-eadq2950 [ Pubmed: 39231220 DOI: doi:10.1126/sciadv.adq2950 ]

EMD-45649
Download Map
3D View
Representative cryo electron tomography reconstructions showing central pair microtubule misalignment in TbArl3A and TbArl3C dual RNAi cells.
Release date: Sept. 11, 2024
Resolution: 10.7 Å
EM Method: Tomography

Huang Y, Dong X, Sun SY, Lim TK, Lin Q, He CY

Sci Adv (2024) 10 pp. eadq2950-eadq2950 [ Pubmed: 39231220 DOI: doi:10.1126/sciadv.adq2950 ]

EMD-19492
Download Map
3D View
Trypanosoma brucei 3-methylcrotonyl-CoA carboxylase
Release date: April 17, 2024
Resolution: 2.37 Å
EM Method: Single-particle
Fitted PDBs: 8rth
Q-score: 0.532

Plaza-Pegueroles A, Aphasizheva I, Aphasizhev R, Fernandez-Tornero C, Ruiz FM

Structure (2024) 32 pp. 930- [ Pubmed: 38593794 DOI: doi:10.1016/j.str.2024.03.010 ]

EMD-28802
Download Map
3D View
Subtomographic average of flagellar axoneme doublet from Trypanosoma brucei FAP106 knockdown mutant
Release date: Sept. 6, 2023
Resolution: 19.5 Å
EM Method: Subtomogram averaging

Shimogawa MM, Wijono AS, Wang H, Zhang J, Sha J, Szombathy N, Vadakkan S, Pelayo P, Jonnalagadda K, Wohlschlegel J, Zhou ZH, Hill KL

Nat Commun (2023) 14 pp. 5225-5225 [ DOI: doi:10.1038/s41467-023-40230-z Pubmed: 37633952 ]

EMD-28803
Download Map
3D View
Subtomographic average of flagellar axoneme doublet from Trypanosoma brucei Wildtype
Release date: Sept. 6, 2023
Resolution: 18.5 Å
EM Method: Subtomogram averaging

Shimogawa MM, Wijono AS, Wang H, Zhang J, Sha J, Szombathy N, Vadakkan S, Pelayo P, Jonnalagadda K, Wohlschlegel J, Zhou ZH, Hill KL

Nat Commun (2023) 14 pp. 5225-5225 [ DOI: doi:10.1038/s41467-023-40230-z Pubmed: 37633952 ]

EMD-28804
Download Map
3D View
Subtomographic average of flagellar axoneme doublet from Trypanosoma brucei MC8 Knockdown mutant
Release date: Sept. 6, 2023
Resolution: 16.5 Å
EM Method: Subtomogram averaging

Shimogawa MM, Wijono AS, Wang H, Zhang J, Sha J, Szombathy N, Vadakkan S, Pelayo P, Jonnalagadda K, Wohlschlegel J, Zhou ZH, Hill KL

Nat Commun (2023) 14 pp. 5225-5225 [ DOI: doi:10.1038/s41467-023-40230-z Pubmed: 37633952 ]

EMD-28805
Download Map
3D View
Subtomographic average of flagellar axoneme doublet from Trypanosoma brucei Wildtype Control 2
Release date: Sept. 6, 2023
Resolution: 24.0 Å
EM Method: Subtomogram averaging

Shimogawa MM, Wijono AS, Wang H, Zhang J, Sha J, Szombathy N, Vadakkan S, Pelayo P, Jonnalagadda K, Wohlschlegel J, Zhou ZH, Hill KL

Nat Commun (2023) 14 pp. 5225-5225 [ DOI: doi:10.1038/s41467-023-40230-z Pubmed: 37633952 ]

Sort by: Download
Showing 1 - 10 of 37. Page 1 of 4
Display:
Statistics
×

Download











































Preview first 10
Download

Filter By

Current Database

  • EMDB [37]

Current status

  • REL [37]

Sample type

  • Complex [19]
  • Protein [16]
  • Cellular component [14]
  • Sample [8]
  • Ligand [7]
  • RNA [7]
  • Cell [4]

Organism

  • Trypanosoma brucei [37]
  • Trypanosoma brucei [4]
  • Thermoplasma acidophilum [3]
  • Homo sapiens [1]

EM Method

  • Single-particle [19]
  • Subtomogram averaging [12]
  • Tomography [6]

Resolution

  • ≥ 2Å and < 3Å [2]
  • ≥ 3Å and < 4Å [14]
  • ≥ 5Å and < 6Å [1]
  • ≥ 8Å and < 12Å [2]
  • ≥ 16Å and < 20Å [4]
  • ≥ 20Å and < 30Å [2]
  • ≥ 30Å [3]

Model molecular weight

  • 50-100 kDa [1]
  • 100-250 kDa [3]
  • 250-500 kDa [4]
  • 500-1000 kDa [7]
  • 2-5 MDa [2]

Release Date

  • 2024 [6]
  • 2023 [10]
  • 2022 [2]
  • 2020 [5]
  • 2018 [3]
  • 2017 [3]
  • 2013 [1]
  • 2011 [7]

Author by name

  • He CY [12]
  • Chiu W [10]
  • Schmid MF [10]
  • Wang H [10]
  • Zhou ZH [10]
  • Aphasizhev R [7]
  • Aphasizheva I [7]
  • Sun SY [7]
  • Alvarez-cabrera AL [6]
  • Hu JJ [6]
  • Huang L [6]
  • Lee JKJ [6]
  • Li X [6]
  • Li Z [6]
  • Liu Q [6]
  • Liu S [6]
  • Suematsu T [6]
  • Yu C [6]
  • Zhang F [6]
  • Zhang L [6]
  • Zhao X [6]
  • Chen M [5]
  • Dong X [5]
  • Fu CJ [5]
  • Gheiratmand L [5]
  • Huang D [5]
  • Khant HA [5]
  • Koyfman AY [5]
  • Hill KL [4]
  • Jonnalagadda K [4]
  • Pelayo P [4]
  • Sha J [4]
  • Shimogawa MM [4]
  • Szombathy N [4]
  • Vadakkan S [4]
  • Wijono AS [4]
  • Wohlschlegel J [4]
  • Zhang J [4]
  • Afanasyev P [3]
  • Blaza JN [3]
  • Blundell TL [3]
  • Carazo JM [3]
  • Carrington M [3]
  • Castro-hartmann P [3]
  • Chaitanya Vedithi S [3]
  • Cheng Y [3]
  • Chirgadze DY [3]
  • Coffino P [3]
  • Corey RA [3]
  • Dougherty M [3]
  • Gragera M [3]
  • Gusach A [3]
  • Kaelber JT [3]
  • Lim CT [3]
  • Matusevicius M [3]
  • Melero R [3]
  • Murshudov G [3]
  • Myasnikov AG [3]
  • Nematbakhsh Y [3]
  • Sansom M [3]
  • Shi J [3]
  • Sprenger T [3]
  • Stansfeld P [3]
  • Tate CG [3]
  • Ungogo MA [3]
  • Wang F [3]
  • Warshamanage R [3]
  • Weyand SN [3]
  • Yamashita K [3]
  • Yu Y [3]
  • Yu Z [3]
  • De Koning Hp [3]
  • Boehm C [2]
  • Brecht M [2]
  • Dai W [2]
  • Effenberger K [2]
  • Goeringer HU [2]
  • Golas MM [2]
  • Huang Y [2]
  • Jonasch D [2]
  • Lim TK [2]
  • Lin Q [2]
  • Ludtke SJ [2]
  • Sander B [2]
  • Stark H [2]
  • Aibara S [1]
  • Alfonzo JD [1]
  • Amunts A [1]
  • Bajaj C [1]
  • Baradaran R [1]
  • Buss SN [1]
  • Chopra N [1]
  • Davies KM [1]
  • Dewar CE [1]
  • Dolce LG [1]
  • Fernandez-tornero C [1]
  • Frank J [1]
  • Fu J [1]
  • Gahura O [1]
  • Gestwicki JE [1]

Author by ORCID

  • Zhou ZH [10]
  • Chiu W [10]
  • Schmid MF [10]
  • Alvarez-cabrera AL [6]
  • Lee JKJ [6]
  • Liu S [6]
  • Hu JJ [6]
  • Zhang F [6]
  • Yu C [6]
  • Huang L [6]
  • Aphasizhev R [6]
  • Li Z [6]
  • Wang H [6]
  • Suematsu T [6]
  • Li X [6]
  • Zhang L [6]
  • Aphasizheva I [6]
  • Shimogawa MM [4]
  • Hill KL [4]
  • Wang H [4]
  • Zhang J [4]
  • Jonnalagadda K [4]
  • Yu Z [3]
  • Kaelber JT [3]
  • Cheng Y [3]
  • Wang F [3]
  • He CY [2]
  • Dong X [2]
  • Lim TK [2]
  • Sander B [2]
  • Lin Q [2]
  • Ludtke SJ [2]
  • Jonasch D [2]
  • Chen M [2]
  • Golas MM [2]
  • Huang Y [2]
  • Fernandez-tornero C [1]
  • Gull K [1]
  • Tobiasson V [1]
  • Hoenger A [1]
  • Dewar CE [1]
  • Muhleip AW [1]
  • Kuhlbrandt W [1]
  • Rubio MAT [1]
  • De La Pena Ah [1]
  • Gahura O [1]
  • Davies KM [1]
  • Williams SK [1]
  • Opoku-nsiah KA [1]
  • Amunts A [1]
  • Baradaran R [1]
  • Gestwicki JE [1]
  • Tengo L [1]
  • Weis F [1]
  • Alfonzo JD [1]
  • Zikova A [1]
  • Bajaj C [1]
  • Des Georges A [1]
  • Kowalinski E [1]
  • Sali A [1]
  • Dolce LG [1]
  • Madison-antenucci S [1]
  • Schnaufer A [1]
  • Hoog JL [1]
  • Aibara S [1]
  • Lander GC [1]

Journal

  • NAT COMMUN [9]
  • PNAS [9]
  • SCIENCE [6]
  • ELIFE [4]
  • EMBO J [3]
  • NAT METHODS [2]
  • SCI ADV [2]
  • NATURE [1]
  • STRUCTURE [1]

Software

  • IMOD [9]
  • PEET [5]
  • CRYOSPARC [4]
  • GCTF [3]
  • EMAN [2]
  • EMAN2 [2]
  • 3DMOD [1]
  • CHIMERA [1]
  • RELION [1]
  • SPIDER [1]

Microscope

  • FEI TITAN KRIOS [22]
  • JEOL 2100 [5]
  • JEOL 2200FS [3]
  • FEI TALOS ARCTICA [2]
  • FEI/PHILIPS CM200FEG [2]
  • FEI POLARA 300 [1]
  • FEI TECNAI F20 [1]
  • FEI TECNAI F30 [1]

Electron Source

  • FIELD EMISSION GUN [32]
  • LAB6 [5]

Film or detector model

  • GATAN K2 SUMMIT 4K X 4K [11]
  • GATAN K3 6K X 4K [9]
  • GATAN K3 BIOQUANTUM 6K X 4K [3]
  • DIRECT ELECTRON DE-12 4K X 3K [2]
  • FEI FALCON II 4K X 4K [2]
  • GATAN ULTRASCAN 4000 4K X 4K [2]
  • KODAK SO-163 FILM [1]

External links

  • PDB [17]
  • AlphaFold DB [16]
  • Gene Ontology [16]
  • InterPro [16]
  • PDBe-Kb [16]
  • UniProt [16]
  • Pfam [14]
  • DrugBank [6]
  • ChEBI [5]
  • ChEMBL [5]
  • Complex Portal [1]
  • EMPIAR [1]
  • SCOP2 [1]