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natural_source_ncbi_code:"56636"

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Current Database

  • EMDB [7]

Current status

  • REL [7]

Sample type

  • Protein [7]
  • Complex [5]
  • Ligand [4]
  • Cellular component [1]
  • Sample [1]

Organism

  • Aeropyrum pernix [7]
  • Mus musculus [1]

EM Method

  • Electron Crystallography [3]
  • Helical reconstruction [2]
  • Single-particle [2]

Resolution

  • ≥ 2Å and < 3Å [1]
  • ≥ 3Å and < 4Å [2]
  • ≥ 5Å and < 6Å [1]
  • ≥ 8Å and < 12Å [1]

Model molecular weight

  • 0-50 kDa [1]
  • 50-100 kDa [2]
  • 100-250 kDa [1]
  • 250-500 kDa [2]

Release Date

  • 2023 [3]
  • 2022 [2]
  • 2019 [1]
  • 2004 [1]

Author by name

  • Arnold FH [3]
  • Danelius E [3]
  • Gonen T [3]
  • Porter NJ [3]
  • Unge JT [3]
  • Cvirkaite-krupovic V [2]
  • Egelman EH [2]
  • Kreutzberger MAB [2]
  • Krupovic M [2]
  • Mackinnon R [2]
  • Unge J [2]
  • Wang F [2]
  • Baquero DP [1]
  • Beltran LC [1]
  • Calladine CR [1]
  • Conticello VP [1]
  • Costa TRD [1]
  • Jiang QX [1]
  • Levental I [1]
  • Liu J [1]
  • Liu Y [1]
  • Miller J [1]
  • Patkowski JB [1]
  • Schouten S [1]
  • Sonani RR [1]
  • Tao X [1]
  • Wang DN [1]

Author by ORCID

  • Arnold FH [3]
  • Gonen T [3]
  • Porter NJ [3]
  • Krupovic M [2]
  • Unge J [2]
  • Danelius E [2]
  • Egelman EH [2]
  • Conticello VP [1]
  • Patkowski JB [1]
  • Mackinnon R [1]
  • Levental I [1]
  • Sonani RR [1]
  • Wang DN [1]
  • Tao X [1]
  • Liu J [1]
  • Costa TRD [1]

Journal

  • J AM CHEM SOC [3]
  • ELIFE [1]
  • NAT COMMUN [1]
  • NATURE [1]
  • PNAS [1]

Software

  • PHENIX [3]
  • CRYOSPARC [2]
  • FREALIGN [1]
  • IMAGIC SPIDER [1]
  • RELION [1]

Microscope

  • FEI TITAN KRIOS [5]
  • FEI TITAN [1]
  • FEI/PHILIPS CM200T [1]

Electron Source

  • FIELD EMISSION GUN [7]

Film or detector model

  • FEI FALCON IV 4K X 4K [3]
  • GATAN K3 6K X 4K [2]
  • GATAN K2 SUMMIT 4K X 4K [1]
  • KODAK SO-163 FILM [1]

External links

  • AlphaFold DB [6]
  • InterPro [6]
  • PDB [6]
  • PDBe-Kb [6]
  • UniProt [6]
  • Gene Ontology [5]
  • Pfam [5]
  • ChEBI [3]
  • ChEMBL [3]
  • DrugBank [3]
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EMD-28615
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MicroED structure of an Aeropyrum pernix protoglobin mutant
Release date: Nov. 8, 2023
Resolution: 2.1 Å
EM Method: Electron Crystallography
Fitted PDBs: 8eum
Q-score: 0.741

Danelius E, Porter NJ, Unge J, Arnold FH, Gonen T

J Am Chem Soc (2023) 145 pp. 7159-7165 [ DOI: doi:10.1021/jacs.2c12004 Pubmed: 36948184 ]

EMD-28616
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MicroED structure of an Aeropyrum pernix protoglobin metallo-carbene complex
Release date: April 5, 2023
EM Method: Electron Crystallography
Fitted PDBs: 8eun

Danelius E, Porter NJ, Unge J, Arnold FH, Gonen T

J Am Chem Soc (2023) 145 pp. 7159-7165 [ DOI: doi:10.1021/jacs.2c12004 Pubmed: 36948184 ]

EMD-27414
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Cryo-EM structure of conjugation pili from Aeropyrum pernix
Release date: March 22, 2023
Resolution: 3.44 Å
EM Method: Helical reconstruction
Fitted PDBs: 8dfu
Q-score: 0.508

Beltran LC, Cvirkaite-Krupovic V, Miller J, Wang F, Kreutzberger MAB, Patkowski JB, Costa TRD, Schouten S, Levental I, Conticello VP, Egelman EH, Krupovic M

Nat Commun (2023) 14 pp. 666-666 [ DOI: doi:10.1038/s41467-023-36349-8 Pubmed: 36750723 ]

EMD-26158
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Cryo-EM of A. pernix flagellum
Release date: June 1, 2022
Resolution: 3.5 Å
EM Method: Helical reconstruction
Fitted PDBs: 7txi
Q-score: 0.473

Kreutzberger MAB, Cvirkaite-Krupovic V, Liu Y, Baquero DP, Liu J, Sonani RR, Calladine CR, Wang F, Krupovic M, Egelman EH

PNAS (2023) 120 pp. e2304256120-e2304256120 [ DOI: doi:10.1073/pnas.2304256120 Pubmed: 37399404 ]

EMD-26768
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MicroED structure of Aeropyrum pernix protoglobin mutant
Release date: May 25, 2022
EM Method: Electron Crystallography
Fitted PDBs: 7ute

Porter NJ, Danelius E, Gonen T, Arnold FH

J Am Chem Soc (2022) 144 pp. 8892-8896 [ DOI: doi:10.1021/jacs.2c02723 Pubmed: 35561334 ]

EMD-20924
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Single particle cryo-EM structure of KvAP
Release date: Dec. 4, 2019
Resolution: 5.9 Å
EM Method: Single-particle
Fitted PDBs: 6uwm
Q-score: 0.228

Tao X, MacKinnon R

eLife (2019) 8 [ Pubmed: 31755864 DOI: doi:10.7554/eLife.52164 ]

EMD-1094
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Electron microscopic analysis of KvAP voltage-dependent K channels in an open conformation.
Release date: Sept. 24, 2004
Resolution: 10.5 Å
EM Method: Single-particle

Jiang QX, Wang DN, MacKinnon R

Nature (2004) 430 pp. 806-810 [ Pubmed: 15306816 DOI: doi:10.1038/nature02735 ]

Sort by: Download
Showing 1 - 7 of 7. Page 1 of 1
Display:
Statistics
×

Download











































Preview first 10
Download

Filter By

Current Database

  • EMDB [7]

Current status

  • REL [7]

Sample type

  • Protein [7]
  • Complex [5]
  • Ligand [4]
  • Cellular component [1]
  • Sample [1]

Organism

  • Aeropyrum pernix [7]
  • Mus musculus [1]

EM Method

  • Electron Crystallography [3]
  • Helical reconstruction [2]
  • Single-particle [2]

Resolution

  • ≥ 2Å and < 3Å [1]
  • ≥ 3Å and < 4Å [2]
  • ≥ 5Å and < 6Å [1]
  • ≥ 8Å and < 12Å [1]

Model molecular weight

  • 0-50 kDa [1]
  • 50-100 kDa [2]
  • 100-250 kDa [1]
  • 250-500 kDa [2]

Release Date

  • 2023 [3]
  • 2022 [2]
  • 2019 [1]
  • 2004 [1]

Author by name

  • Arnold FH [3]
  • Danelius E [3]
  • Gonen T [3]
  • Porter NJ [3]
  • Unge JT [3]
  • Cvirkaite-krupovic V [2]
  • Egelman EH [2]
  • Kreutzberger MAB [2]
  • Krupovic M [2]
  • Mackinnon R [2]
  • Unge J [2]
  • Wang F [2]
  • Baquero DP [1]
  • Beltran LC [1]
  • Calladine CR [1]
  • Conticello VP [1]
  • Costa TRD [1]
  • Jiang QX [1]
  • Levental I [1]
  • Liu J [1]
  • Liu Y [1]
  • Miller J [1]
  • Patkowski JB [1]
  • Schouten S [1]
  • Sonani RR [1]
  • Tao X [1]
  • Wang DN [1]

Author by ORCID

  • Arnold FH [3]
  • Gonen T [3]
  • Porter NJ [3]
  • Krupovic M [2]
  • Unge J [2]
  • Danelius E [2]
  • Egelman EH [2]
  • Conticello VP [1]
  • Patkowski JB [1]
  • Mackinnon R [1]
  • Levental I [1]
  • Sonani RR [1]
  • Wang DN [1]
  • Tao X [1]
  • Liu J [1]
  • Costa TRD [1]

Journal

  • J AM CHEM SOC [3]
  • ELIFE [1]
  • NAT COMMUN [1]
  • NATURE [1]
  • PNAS [1]

Software

  • PHENIX [3]
  • CRYOSPARC [2]
  • FREALIGN [1]
  • IMAGIC SPIDER [1]
  • RELION [1]

Microscope

  • FEI TITAN KRIOS [5]
  • FEI TITAN [1]
  • FEI/PHILIPS CM200T [1]

Electron Source

  • FIELD EMISSION GUN [7]

Film or detector model

  • FEI FALCON IV 4K X 4K [3]
  • GATAN K3 6K X 4K [2]
  • GATAN K2 SUMMIT 4K X 4K [1]
  • KODAK SO-163 FILM [1]

External links

  • AlphaFold DB [6]
  • InterPro [6]
  • PDB [6]
  • PDBe-Kb [6]
  • UniProt [6]
  • Gene Ontology [5]
  • Pfam [5]
  • ChEBI [3]
  • ChEMBL [3]
  • DrugBank [3]