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natural_source_ncbi_code:"45657"

Filter By

Current Database

  • EMDB [20]

Current status

  • REL [20]

Sample type

  • Complex [20]
  • Protein [16]
  • RNA [16]
  • Ligand [11]

Organism

  • Desulfonema ishimotonii [20]
  • Escherichia coli [5]
  • Synthetic construct [1]
  • (no species) [1]

EM Method

  • Single-particle [20]

Resolution

  • ≥ 2Å and < 3Å [13]
  • ≥ 3Å and < 4Å [7]

Model molecular weight

  • 100-250 kDa [9]
  • 250-500 kDa [7]

Release Date

  • 2024 [4]
  • 2023 [5]
  • 2022 [11]

Author by name

  • Abudayyeh OO [10]
  • Gootenberg JS [10]
  • Nishimasu H [10]
  • Demircioglu FE [6]
  • Faure G [6]
  • Li D [6]
  • Macrae RK [6]
  • Strecker J [6]
  • Wilkinson ME [6]
  • Zhang F [6]
  • Dong Q [5]
  • Huo Y [5]
  • Jiang T [5]
  • Zhao H [5]
  • Chen Y [4]
  • Dong H [4]
  • Hong T [4]
  • Isayama Y [4]
  • Kato K [4]
  • Li X [4]
  • Luo Q [4]
  • Ma H [4]
  • Ma HY [4]
  • Nishizawa T [4]
  • Okazaki S [4]
  • Pang J [4]
  • Shen C [4]
  • Su Z [4]
  • Tang X [4]
  • Tang XD [4]
  • Wang X [4]
  • Wang Y [4]
  • Zhang C [4]
  • Zhou W [4]
  • Adachi S [3]
  • Ishikawa J [3]
  • Jiang K [3]
  • Koonin EV [3]
  • Makarova KS [3]
  • Schmitt-ulms C [3]
  • Das A [1]
  • Goswami H [1]
  • Goswami HN [1]
  • Li H [1]
  • Rai J [1]

Author by ORCID

  • Nishimasu H [9]
  • Abudayyeh OO [9]
  • Gootenberg JS [9]
  • Strecker J [6]
  • Faure G [6]
  • Demircioglu FE [6]
  • Macrae RK [6]
  • Li D [6]
  • Zhang F [6]
  • Wilkinson ME [6]
  • Huo Y [5]
  • Zhao H [5]
  • Jiang T [5]
  • Tang X [4]
  • Dong H [4]
  • Su Z [4]
  • Ma H [4]
  • Zhou W [4]
  • Adachi S [3]
  • Nishizawa T [3]
  • Okazaki S [3]
  • Makarova KS [3]
  • Jiang K [3]
  • Kato K [3]
  • Schmitt-ulms C [3]
  • Koonin EV [3]
  • Ishikawa J [3]
  • Das A [1]
  • Li H [1]
  • Goswami HN [1]

Journal

  • SCIENCE [9]
  • NAT MICROBIOL [5]
  • SIGNAL TRANSDUCT TARGET THER [4]
  • CELL [1]
  • ELIFE [1]

Microscope

  • FEI TITAN KRIOS [20]

Electron Source

  • FIELD EMISSION GUN [20]

Film or detector model

  • GATAN K3 6K X 4K [9]
  • GATAN K3 BIOQUANTUM 6K X 4K [7]
  • GATAN K2 QUANTUM 4K X 4K [4]

External links

  • Gene Ontology [16]
  • InterPro [16]
  • PDB [16]
  • PDBe-Kb [16]
  • Pfam [16]
  • UniProt [16]
  • ChEBI [11]
  • ChEMBL [11]
  • DrugBank [11]
  • EMPIAR [11]
  • AlphaFold DB [8]
Sort by: Download
Showing 1 - 10 of 20. Page 1 of 2
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Preview first 10
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EMD-37640
Download Map
3D View
Cryo-EM structure of DiCas7-11 in complex with crRNA
Release date: May 29, 2024
Resolution: 2.93 Å
EM Method: Single-particle
Fitted PDBs: 8wm4
Q-score: 0.435

Hong T, Luo Q, Ma H, Wang X, Li X, Shen C, Pang J, Wang Y, Chen Y, Zhang C, Su Z, Dong H, Tang X

Signal Transduct Target Ther (2024) 9 pp. 111-111 [ DOI: doi:10.1038/s41392-024-01821-4 Pubmed: 38735995 ]

EMD-37649
Download Map
3D View
Cryo-EM structure of DiCas7-11-crRNA in complex with regulator
Release date: May 29, 2024
Resolution: 2.9 Å
EM Method: Single-particle
Fitted PDBs: 8wmc
Q-score: 0.538

Hong T, Luo Q, Ma H, Wang X, Li X, Shen C, Pang J, Wang Y, Chen Y, Zhang C, Su Z, Dong H, Tang X

Signal Transduct Target Ther (2024) 9 pp. 111-111 [ DOI: doi:10.1038/s41392-024-01821-4 Pubmed: 38735995 ]

EMD-37653
Download Map
3D View
Cryo-EM structure of DiCas7-11 mutant in complex with crRNA
Release date: May 29, 2024
Resolution: 3.53 Å
EM Method: Single-particle
Fitted PDBs: 8wmi
Q-score: 0.426

Hong T, Luo Q, Ma H, Wang X, Li X, Shen C, Pang J, Wang Y, Chen Y, Zhang C, Su Z, Dong H, Tang X

Signal Transduct Target Ther (2024) 9 pp. 111-111 [ DOI: doi:10.1038/s41392-024-01821-4 Pubmed: 38735995 ]

EMD-37655
Download Map
3D View
Cryo-EM structure of Cas7-11-crRNA bound to N-terminal of TPR-CHAT
Release date: May 29, 2024
Resolution: 2.86 Å
EM Method: Single-particle
Fitted PDBs: 8wml
Q-score: 0.522

Hong T, Luo Q, Ma H, Wang X, Li X, Shen C, Pang J, Wang Y, Chen Y, Zhang C, Su Z, Dong H, Tang X

Signal Transduct Target Ther (2024) 9 pp. 111-111 [ DOI: doi:10.1038/s41392-024-01821-4 Pubmed: 38735995 ]

EMD-33955
Download Map
3D View
Cryo-EM structure of Cas7-11-crRNA binary complex
Release date: Feb. 1, 2023
Resolution: 3.53 Å
EM Method: Single-particle
Fitted PDBs: 7yn9
Q-score: 0.51

Huo Y, Zhao H, Dong Q, Jiang T

Nat Microbiol (2023) 8 pp. 522-532 [ Pubmed: 36702942 DOI: doi:10.1038/s41564-022-01316-4 ]

EMD-33956
Download Map
3D View
Cryo-EM structure of Cas7-11-crRNA bound to target RNA-1
Release date: Feb. 1, 2023
Resolution: 3.64 Å
EM Method: Single-particle
Fitted PDBs: 7yna
Q-score: 0.501

Huo Y, Zhao H, Dong Q, Jiang T

Nat Microbiol (2023) 8 pp. 522-532 [ Pubmed: 36702942 DOI: doi:10.1038/s41564-022-01316-4 ]

EMD-33957
Download Map
3D View
Cryo-EM structure of Cas7-11-crRNA bound to target RNA-2
Release date: Feb. 1, 2023
Resolution: 3.46 Å
EM Method: Single-particle
Fitted PDBs: 7ynb
Q-score: 0.512

Huo Y, Zhao H, Dong Q, Jiang T

Nat Microbiol (2023) 8 pp. 522-532 [ Pubmed: 36702942 DOI: doi:10.1038/s41564-022-01316-4 ]

EMD-33958
Download Map
3D View
Cryo-EM structure of Cas7-11-crRNA bound to target RNA-3
Release date: Feb. 1, 2023
Resolution: 3.14 Å
EM Method: Single-particle
Fitted PDBs: 7ync
Q-score: 0.542

Huo Y, Zhao H, Dong Q, Jiang T

Nat Microbiol (2023) 8 pp. 522-532 [ Pubmed: 36702942 DOI: doi:10.1038/s41564-022-01316-4 ]

EMD-33959
Download Map
3D View
Cryo-EM structure of Cas7-11-crRNA-Csx29 ternary complex
Release date: Feb. 1, 2023
Resolution: 3.29 Å
EM Method: Single-particle
Fitted PDBs: 7ynd
Q-score: 0.526

Huo Y, Zhao H, Dong Q, Jiang T

Nat Microbiol (2023) 8 pp. 522-532 [ Pubmed: 36702942 DOI: doi:10.1038/s41564-022-01316-4 ]

EMD-28064
Download Map
3D View
Raw data
EMPIAR-11466
Cas7-11 in complex with Csx29, focus refined on Cas7-11
Release date: Nov. 16, 2022
Resolution: 2.95 Å
EM Method: Single-particle
Fitted PDBs: 8eex
Q-score: 0.537

Strecker J, Demircioglu FE, Li D, Faure G, Wilkinson ME, Gootenberg JS, Abudayyeh OO, Nishimasu H, Macrae RK, Zhang F

Science (2022) 378 pp. 874-881 [ DOI: doi:10.1126/science.add7450 Pubmed: 36423276 ]

Sort by: Download
Showing 1 - 10 of 20. Page 1 of 2
Display:
Statistics
×

Download











































Preview first 10
Download

Filter By

Current Database

  • EMDB [20]

Current status

  • REL [20]

Sample type

  • Complex [20]
  • Protein [16]
  • RNA [16]
  • Ligand [11]

Organism

  • Desulfonema ishimotonii [20]
  • Escherichia coli [5]
  • Synthetic construct [1]
  • (no species) [1]

EM Method

  • Single-particle [20]

Resolution

  • ≥ 2Å and < 3Å [13]
  • ≥ 3Å and < 4Å [7]

Model molecular weight

  • 100-250 kDa [9]
  • 250-500 kDa [7]

Release Date

  • 2024 [4]
  • 2023 [5]
  • 2022 [11]

Author by name

  • Abudayyeh OO [10]
  • Gootenberg JS [10]
  • Nishimasu H [10]
  • Demircioglu FE [6]
  • Faure G [6]
  • Li D [6]
  • Macrae RK [6]
  • Strecker J [6]
  • Wilkinson ME [6]
  • Zhang F [6]
  • Dong Q [5]
  • Huo Y [5]
  • Jiang T [5]
  • Zhao H [5]
  • Chen Y [4]
  • Dong H [4]
  • Hong T [4]
  • Isayama Y [4]
  • Kato K [4]
  • Li X [4]
  • Luo Q [4]
  • Ma H [4]
  • Ma HY [4]
  • Nishizawa T [4]
  • Okazaki S [4]
  • Pang J [4]
  • Shen C [4]
  • Su Z [4]
  • Tang X [4]
  • Tang XD [4]
  • Wang X [4]
  • Wang Y [4]
  • Zhang C [4]
  • Zhou W [4]
  • Adachi S [3]
  • Ishikawa J [3]
  • Jiang K [3]
  • Koonin EV [3]
  • Makarova KS [3]
  • Schmitt-ulms C [3]
  • Das A [1]
  • Goswami H [1]
  • Goswami HN [1]
  • Li H [1]
  • Rai J [1]

Author by ORCID

  • Nishimasu H [9]
  • Abudayyeh OO [9]
  • Gootenberg JS [9]
  • Strecker J [6]
  • Faure G [6]
  • Demircioglu FE [6]
  • Macrae RK [6]
  • Li D [6]
  • Zhang F [6]
  • Wilkinson ME [6]
  • Huo Y [5]
  • Zhao H [5]
  • Jiang T [5]
  • Tang X [4]
  • Dong H [4]
  • Su Z [4]
  • Ma H [4]
  • Zhou W [4]
  • Adachi S [3]
  • Nishizawa T [3]
  • Okazaki S [3]
  • Makarova KS [3]
  • Jiang K [3]
  • Kato K [3]
  • Schmitt-ulms C [3]
  • Koonin EV [3]
  • Ishikawa J [3]
  • Das A [1]
  • Li H [1]
  • Goswami HN [1]

Journal

  • SCIENCE [9]
  • NAT MICROBIOL [5]
  • SIGNAL TRANSDUCT TARGET THER [4]
  • CELL [1]
  • ELIFE [1]

Microscope

  • FEI TITAN KRIOS [20]

Electron Source

  • FIELD EMISSION GUN [20]

Film or detector model

  • GATAN K3 6K X 4K [9]
  • GATAN K3 BIOQUANTUM 6K X 4K [7]
  • GATAN K2 QUANTUM 4K X 4K [4]

External links

  • Gene Ontology [16]
  • InterPro [16]
  • PDB [16]
  • PDBe-Kb [16]
  • Pfam [16]
  • UniProt [16]
  • ChEBI [11]
  • ChEMBL [11]
  • DrugBank [11]
  • EMPIAR [11]
  • AlphaFold DB [8]