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Filter By

Current Database

  • EMDB [46]

Current status

  • REL [46]

Sample type

  • Virus [42]
  • Protein [36]
  • Ligand [19]
  • Sample [14]
  • Complex [10]
  • Other [1]

Organism

  • Enterovirus a [46]
  • Homo sapiens [6]
  • Mus musculus [5]
  • (no species) [4]
  • Mus musculoides [2]

EM Method

  • Single-particle [46]

Resolution

  • ≥ 2Å and < 3Å [10]
  • ≥ 3Å and < 4Å [13]
  • ≥ 4Å and < 5Å [4]
  • ≥ 5Å and < 6Å [3]
  • ≥ 6Å and < 8Å [6]
  • ≥ 8Å and < 12Å [6]
  • ≥ 12Å and < 16Å [2]
  • ≥ 16Å and < 20Å [1]
  • ≥ 20Å and < 30Å [1]

Model molecular weight

  • 0-50 kDa [1]
  • 50-100 kDa [1]
  • 1-2 MDa [4]
  • 2-5 MDa [7]
  • 5-10 MDa [27]

Release Date

  • 2025 [1]
  • 2024 [8]
  • 2023 [10]
  • 2022 [1]
  • 2020 [3]
  • 2019 [7]
  • 2018 [1]
  • 2017 [1]
  • 2016 [4]
  • 2014 [5]
  • 2013 [5]

Author by name

  • Hafenstein S [11]
  • Andino R [8]
  • Bianco S [8]
  • Capponi S [8]
  • Catching A [8]
  • Lee H [8]
  • Te Yeh M [8]
  • Ashley RE [6]
  • Cheng T [6]
  • Conway JF [6]
  • Jiang Y [6]
  • Li S [6]
  • Li Y [6]
  • Makhov AM [6]
  • Xia N [6]
  • Xu L [6]
  • Ye X [6]
  • Zheng Q [6]
  • Zhu R [6]
  • Chen H [5]
  • Chen X [5]
  • Chen Z [5]
  • Cong Y [5]
  • Delang L [5]
  • Deng W [5]
  • Fang M [5]
  • Fry EE [5]
  • Gago F [5]
  • Han J [5]
  • He M [5]
  • Huang Y [5]
  • Huang Z [5]
  • Liu C [5]
  • Luo W [5]
  • Martinez-gualda B [5]
  • Mirabelli C [5]
  • Neyts J [5]
  • Ning W [5]
  • Que Y [5]
  • San-felix A [5]
  • Shingler KL [5]
  • Stuart DI [5]
  • Sun H [5]
  • Sun L [5]
  • Wang X [5]
  • Weng S [5]
  • Wu Y [5]
  • Yang H [5]
  • Yin Z [5]
  • Yu H [5]
  • Zhang C [5]
  • Zhang D [5]
  • Zhang J [5]
  • Zhao H [5]
  • Zhou L [5]
  • Zhou Z [5]
  • Zou Y [5]
  • Carnegie MS [4]
  • Chen T [4]
  • Cifuente JO [4]
  • Fan C [4]
  • Jiang W [4]
  • Kong LL [4]
  • Ku ZQ [4]
  • Liu QW [4]
  • Rao Z [4]
  • Rowlands DJ [4]
  • Shi JP [4]
  • Ye XH [4]
  • Yoder JL [4]
  • Zhang LQ [4]
  • Zhang YY [4]
  • Zuo T [4]
  • Abdelnabi R [3]
  • Bator CM [3]
  • Camarasa MJ [3]
  • Cardosa J [3]
  • Gao Q [3]
  • Grehan K [3]
  • Hogle JM [3]
  • Kingston NJ [3]
  • Kotecha A [3]
  • Kuhn RJ [3]
  • Lim P-Y [3]
  • Marti-mari O [3]
  • Noppen S [3]
  • Perera R [3]
  • Plevka P [3]
  • Quesada E [3]
  • Ren J [3]
  • Rossmann MG [3]
  • Schols D [3]
  • Snowden JS [3]
  • Stonehouse NJ [3]
  • Suksatu A [3]
  • Wang J [3]
  • Zhang X [3]
  • Zhou D [3]
  • Bator C [2]
  • Cao L [2]

Author by ORCID

  • Andino R [8]
  • Capponi S [8]
  • Lee H [8]
  • Ashley RE [6]
  • Cheng T [6]
  • Zhu R [6]
  • Conway JF [6]
  • Zheng Q [6]
  • Xu L [5]
  • Neyts J [5]
  • Luo W [5]
  • Gago F [5]
  • Li S [5]
  • Stuart DI [5]
  • He M [5]
  • Mirabelli C [5]
  • Zhang J [5]
  • Martinez-gualda B [5]
  • Xia N [5]
  • Shingler KL [5]
  • San-felix A [5]
  • Jiang Y [5]
  • Cifuente JO [4]
  • Ku ZQ [4]
  • Jiang W [4]
  • Huang Z [4]
  • Ye XH [4]
  • Zuo T [4]
  • Kingston NJ [3]
  • Snowden JS [3]
  • Fry EE [3]
  • Abdelnabi R [3]
  • Suksatu A [3]
  • Noppen S [3]
  • Hogle JM [3]
  • Kotecha A [3]
  • Rowlands DJ [3]
  • Camarasa MJ [3]
  • Zhou D [3]
  • Marti-mari O [3]
  • Stonehouse NJ [3]
  • Schols D [3]
  • Grehan K [3]
  • Ren J [3]
  • Plevka P [3]
  • Lim P-Y [3]
  • Thibaut HJ [2]
  • Huang KA [2]
  • Polyak SJ [2]
  • Lanko K [2]
  • Passchier TC [2]
  • Leyssen P [2]
  • Dallmeier K [2]
  • Hietanen EV [2]
  • Filman DJ [2]
  • Delang L [2]
  • Hall PK [2]
  • Hafenstein S [2]
  • Cao L [2]
  • Wang Z [1]
  • Cai Y [1]
  • Cui S [1]
  • Sun Y [1]
  • Zhao Y [1]
  • Zhang X [1]
  • Wang J [1]
  • Gao X [1]
  • Shimizu H [1]
  • Fox H [1]
  • Guo Y [1]
  • Macadam AJ [1]
  • Ding W [1]
  • Li J [1]

Journal

  • NAT COMMUN [11]
  • PLOS PATHOG [10]
  • J VIROL [6]
  • NAT MICROBIOL [6]
  • J MED CHEM [4]
  • PNAS [3]
  • MBIO [2]
  • BIORXIV [1]
  • STRUCTURE [1]
  • TO BE PUBLISHED [1]
  • VACCINES (BASEL) [1]

Software

  • RELION [10]
  • CHIMERA [6]
  • JSPR, EMAN, EMAN2 [4]
  • EMAN, EMAN2 [3]
  • EMFIT [3]
  • AUTO3DEM, EMAN2 [2]
  • CHIMERA, SITUS [2]
  • EMAN2, AUTO3DEM [2]
  • VEDA [2]
  • EMAN [1]
  • EMAN, EMAN2, AUTO3DEM, CHIMERA [1]
  • EMAN2 [1]
  • SITUS [1]

Microscope

  • FEI TITAN KRIOS [16]
  • FEI TECNAI ARCTICA [8]
  • FEI TECNAI F20 [6]
  • FEI TECNAI F30 [6]
  • FEI POLARA 300 [4]
  • FEI/PHILIPS CM200FEG [3]
  • FEI TALOS ARCTICA [1]
  • FEI TITAN [1]
  • TFS KRIOS [1]

Electron Source

  • FIELD EMISSION GUN [45]
  • OTHER [1]

Film or detector model

  • GATAN K3 6K X 4K [15]
  • KODAK SO-163 FILM [9]
  • FEI FALCON III 4K X 4K [6]
  • GATAN K2 SUMMIT 4K X 4K [6]
  • FEI FALCON II 4K X 4K [5]
  • FEI FALCON IV 4K X 4K [3]
  • GATAN K2 QUANTUM 4K X 4K [1]
  • GATAN ULTRASCAN 4000 4K X 4K [1]

External links

  • PDB [41]
  • UniProt [28]
  • PDBe-Kb [26]
  • Gene Ontology [25]
  • InterPro [25]
  • Pfam [25]
  • ChEBI [18]
  • AlphaFold DB [4]
  • ChEMBL [4]
  • SCOP2 [4]
  • Complex Portal [3]
  • DrugBank [2]
Sort by: Download
Showing 1 - 10 of 46. Page 1 of 5
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EMD-63694
Download Map
3D View
Cryo-EM structure of enterovirus A71 mature virion in complex with Fab CT11F9
Release date: April 23, 2025
Resolution: 3.04 Å
EM Method: Single-particle
Fitted PDBs: 9m7v
Q-score: 0.683

Zhang X, Yi L, Yu D, Li J, Li X, Wu X, Gao F, He Q, Wang W, Wang K, Wang Z, Liu Z, Li Y, Zhao Y, Li H, Ma X, Zheng Q, Xu L, Cheng T, Zhu R, Guo J, Li J, Mao Q, Liang Z

Vaccines (Basel) (2025) 13 [ Pubmed: 40333322 DOI: doi:10.3390/vaccines13040404 ]

EMD-38165
Download Map
3D View
Cryo-EM structure of enterovirus A71 mature virion in complex with Fab h1A6.2
Release date: Sept. 4, 2024
Resolution: 3.52 Å
EM Method: Single-particle
Fitted PDBs: 8x95

Zhu R, Wu Y, Huang Y, Jiang Y, Jiang Y, Zhang D, Sun H, Zhou Z, Zhou L, Weng S, Chen H, Chen X, Ning W, Zou Y, He M, Yang H, Deng W, Li Y, Chen Z, Ye X, Han J, Yin Z, Zhao H, Liu C, Que Y, Fang M, Yu H, Zhang J, Luo W, Li S, Zheng Q, Xu L, Xia N, Cheng T

Nat Microbiol (2024) 9 pp. 2939-2953 [ Pubmed: 39424982 DOI: doi:10.1038/s41564-024-01822-7 ]

EMD-38166
Download Map
3D View
Cryo-EM structure of enterovirus A71 A-particle in complex with Fab h1A6.2
Release date: Sept. 4, 2024
Resolution: 2.89 Å
EM Method: Single-particle
Fitted PDBs: 8x96

Zhu R, Wu Y, Huang Y, Jiang Y, Jiang Y, Zhang D, Sun H, Zhou Z, Zhou L, Weng S, Chen H, Chen X, Ning W, Zou Y, He M, Yang H, Deng W, Li Y, Chen Z, Ye X, Han J, Yin Z, Zhao H, Liu C, Que Y, Fang M, Yu H, Zhang J, Luo W, Li S, Zheng Q, Xu L, Xia N, Cheng T

Nat Microbiol (2024) 9 pp. 2939-2953 [ Pubmed: 39424982 DOI: doi:10.1038/s41564-024-01822-7 ]

EMD-38167
Download Map
3D View
Cryo-EM structure of enterovirus A71 empty particle in complex with Fab h1A6.2
Release date: Sept. 4, 2024
Resolution: 2.98 Å
EM Method: Single-particle
Fitted PDBs: 8x97

Zhu R, Wu Y, Huang Y, Jiang Y, Jiang Y, Zhang D, Sun H, Zhou Z, Zhou L, Weng S, Chen H, Chen X, Ning W, Zou Y, He M, Yang H, Deng W, Li Y, Chen Z, Ye X, Han J, Yin Z, Zhao H, Liu C, Que Y, Fang M, Yu H, Zhang J, Luo W, Li S, Zheng Q, Xu L, Xia N, Cheng T

Nat Microbiol (2024) 9 pp. 2939-2953 [ Pubmed: 39424982 DOI: doi:10.1038/s41564-024-01822-7 ]

EMD-39570
Download Map
3D View
Cryo-EM structure of enterovirus A71 empty particle
Release date: Sept. 4, 2024
Resolution: 2.96 Å
EM Method: Single-particle
Fitted PDBs: 8ytb

Zhu R, Wu Y, Huang Y, Jiang Y, Jiang Y, Zhang D, Sun H, Zhou Z, Zhou L, Weng S, Chen H, Chen X, Ning W, Zou Y, He M, Yang H, Deng W, Li Y, Chen Z, Ye X, Han J, Yin Z, Zhao H, Liu C, Que Y, Fang M, Yu H, Zhang J, Luo W, Li S, Zheng Q, Xu L, Xia N, Cheng T

Nat Microbiol (2024) 9 pp. 2939-2953 [ Pubmed: 39424982 DOI: doi:10.1038/s41564-024-01822-7 ]

EMD-39572
Download Map
3D View
Cryo-EM structure of enterovirus A71 mature virion
Release date: Sept. 4, 2024
Resolution: 3.07 Å
EM Method: Single-particle
Fitted PDBs: 8ytj

Zhu R, Wu Y, Huang Y, Jiang Y, Jiang Y, Zhang D, Sun H, Zhou Z, Zhou L, Weng S, Chen H, Chen X, Ning W, Zou Y, He M, Yang H, Deng W, Li Y, Chen Z, Ye X, Han J, Yin Z, Zhao H, Liu C, Que Y, Fang M, Yu H, Zhang J, Luo W, Li S, Zheng Q, Xu L, Xia N, Cheng T

Nat Microbiol (2024) 9 pp. 2939-2953 [ Pubmed: 39424982 DOI: doi:10.1038/s41564-024-01822-7 ]

EMD-50200
Download Map
3D View
EVA71 E096A native particle
Release date: Sept. 4, 2024
Resolution: 2.5 Å
EM Method: Single-particle
Fitted PDBs: 9f5s
Q-score: 0.638

Kingston NJ, Snowden JS, Grehan K, Hall PK, Hietanen EV, Passchier TC, Polyak SJ, Filman DJ, Hogle JM, Rowlands DJ, Stonehouse NJ

PLoS Pathog (2024) 20 pp. e1012511-e1012511 [ Pubmed: 39298524 DOI: doi:10.1371/journal.ppat.1012511 ]

EMD-50221
Download Map
3D View
EVA71 E096A native particle
Release date: Sept. 4, 2024
Resolution: 2.7 Å
EM Method: Single-particle
Fitted PDBs: 9f6a
Q-score: 0.61

Kingston NJ, Snowden JS, Grehan K, Hall PK, Hietanen EV, Passchier TC, Polyak SJ, Filman DJ, Hogle JM, Rowlands DJ, Stonehouse NJ

PLoS Pathog (2024) 20 pp. e1012511-e1012511 [ Pubmed: 39298524 DOI: doi:10.1371/journal.ppat.1012511 ]

EMD-38156
Download Map
3D View
Structure of enterovirus protease in complex host factor
Release date: May 29, 2024
Resolution: 3.14 Å
EM Method: Single-particle
Fitted PDBs: 8x8q
Q-score: 0.544

Gao X, Wang B, Zhu K, Wang L, Qin B, Shang K, Ding W, Wang J, Cui S

Nat Commun (2024) 15 pp. 4176-4176 [ Pubmed: 38755176 DOI: doi:10.1038/s41467-024-48504-w ]

EMD-27850
Download Map
3D View
Purification of Enterovirus A71, strain 4643, WT capsid
Release date: Aug. 30, 2023
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 8e2x
Q-score: 0.54

Catching A, Te Yeh M, Bianco S, Capponi S, Andino R

Nat Commun (2023) 14 pp. 7450-7450 [ Pubmed: 37978288 DOI: doi:10.1038/s41467-023-43029-0 ]

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Filter By

Current Database

  • EMDB [46]

Current status

  • REL [46]

Sample type

  • Virus [42]
  • Protein [36]
  • Ligand [19]
  • Sample [14]
  • Complex [10]
  • Other [1]

Organism

  • Enterovirus a [46]
  • Homo sapiens [6]
  • Mus musculus [5]
  • (no species) [4]
  • Mus musculoides [2]

EM Method

  • Single-particle [46]

Resolution

  • ≥ 2Å and < 3Å [10]
  • ≥ 3Å and < 4Å [13]
  • ≥ 4Å and < 5Å [4]
  • ≥ 5Å and < 6Å [3]
  • ≥ 6Å and < 8Å [6]
  • ≥ 8Å and < 12Å [6]
  • ≥ 12Å and < 16Å [2]
  • ≥ 16Å and < 20Å [1]
  • ≥ 20Å and < 30Å [1]

Model molecular weight

  • 0-50 kDa [1]
  • 50-100 kDa [1]
  • 1-2 MDa [4]
  • 2-5 MDa [7]
  • 5-10 MDa [27]

Release Date

  • 2025 [1]
  • 2024 [8]
  • 2023 [10]
  • 2022 [1]
  • 2020 [3]
  • 2019 [7]
  • 2018 [1]
  • 2017 [1]
  • 2016 [4]
  • 2014 [5]
  • 2013 [5]

Author by name

  • Hafenstein S [11]
  • Andino R [8]
  • Bianco S [8]
  • Capponi S [8]
  • Catching A [8]
  • Lee H [8]
  • Te Yeh M [8]
  • Ashley RE [6]
  • Cheng T [6]
  • Conway JF [6]
  • Jiang Y [6]
  • Li S [6]
  • Li Y [6]
  • Makhov AM [6]
  • Xia N [6]
  • Xu L [6]
  • Ye X [6]
  • Zheng Q [6]
  • Zhu R [6]
  • Chen H [5]
  • Chen X [5]
  • Chen Z [5]
  • Cong Y [5]
  • Delang L [5]
  • Deng W [5]
  • Fang M [5]
  • Fry EE [5]
  • Gago F [5]
  • Han J [5]
  • He M [5]
  • Huang Y [5]
  • Huang Z [5]
  • Liu C [5]
  • Luo W [5]
  • Martinez-gualda B [5]
  • Mirabelli C [5]
  • Neyts J [5]
  • Ning W [5]
  • Que Y [5]
  • San-felix A [5]
  • Shingler KL [5]
  • Stuart DI [5]
  • Sun H [5]
  • Sun L [5]
  • Wang X [5]
  • Weng S [5]
  • Wu Y [5]
  • Yang H [5]
  • Yin Z [5]
  • Yu H [5]
  • Zhang C [5]
  • Zhang D [5]
  • Zhang J [5]
  • Zhao H [5]
  • Zhou L [5]
  • Zhou Z [5]
  • Zou Y [5]
  • Carnegie MS [4]
  • Chen T [4]
  • Cifuente JO [4]
  • Fan C [4]
  • Jiang W [4]
  • Kong LL [4]
  • Ku ZQ [4]
  • Liu QW [4]
  • Rao Z [4]
  • Rowlands DJ [4]
  • Shi JP [4]
  • Ye XH [4]
  • Yoder JL [4]
  • Zhang LQ [4]
  • Zhang YY [4]
  • Zuo T [4]
  • Abdelnabi R [3]
  • Bator CM [3]
  • Camarasa MJ [3]
  • Cardosa J [3]
  • Gao Q [3]
  • Grehan K [3]
  • Hogle JM [3]
  • Kingston NJ [3]
  • Kotecha A [3]
  • Kuhn RJ [3]
  • Lim P-Y [3]
  • Marti-mari O [3]
  • Noppen S [3]
  • Perera R [3]
  • Plevka P [3]
  • Quesada E [3]
  • Ren J [3]
  • Rossmann MG [3]
  • Schols D [3]
  • Snowden JS [3]
  • Stonehouse NJ [3]
  • Suksatu A [3]
  • Wang J [3]
  • Zhang X [3]
  • Zhou D [3]
  • Bator C [2]
  • Cao L [2]

Author by ORCID

  • Andino R [8]
  • Capponi S [8]
  • Lee H [8]
  • Ashley RE [6]
  • Cheng T [6]
  • Zhu R [6]
  • Conway JF [6]
  • Zheng Q [6]
  • Xu L [5]
  • Neyts J [5]
  • Luo W [5]
  • Gago F [5]
  • Li S [5]
  • Stuart DI [5]
  • He M [5]
  • Mirabelli C [5]
  • Zhang J [5]
  • Martinez-gualda B [5]
  • Xia N [5]
  • Shingler KL [5]
  • San-felix A [5]
  • Jiang Y [5]
  • Cifuente JO [4]
  • Ku ZQ [4]
  • Jiang W [4]
  • Huang Z [4]
  • Ye XH [4]
  • Zuo T [4]
  • Kingston NJ [3]
  • Snowden JS [3]
  • Fry EE [3]
  • Abdelnabi R [3]
  • Suksatu A [3]
  • Noppen S [3]
  • Hogle JM [3]
  • Kotecha A [3]
  • Rowlands DJ [3]
  • Camarasa MJ [3]
  • Zhou D [3]
  • Marti-mari O [3]
  • Stonehouse NJ [3]
  • Schols D [3]
  • Grehan K [3]
  • Ren J [3]
  • Plevka P [3]
  • Lim P-Y [3]
  • Thibaut HJ [2]
  • Huang KA [2]
  • Polyak SJ [2]
  • Lanko K [2]
  • Passchier TC [2]
  • Leyssen P [2]
  • Dallmeier K [2]
  • Hietanen EV [2]
  • Filman DJ [2]
  • Delang L [2]
  • Hall PK [2]
  • Hafenstein S [2]
  • Cao L [2]
  • Wang Z [1]
  • Cai Y [1]
  • Cui S [1]
  • Sun Y [1]
  • Zhao Y [1]
  • Zhang X [1]
  • Wang J [1]
  • Gao X [1]
  • Shimizu H [1]
  • Fox H [1]
  • Guo Y [1]
  • Macadam AJ [1]
  • Ding W [1]
  • Li J [1]

Journal

  • NAT COMMUN [11]
  • PLOS PATHOG [10]
  • J VIROL [6]
  • NAT MICROBIOL [6]
  • J MED CHEM [4]
  • PNAS [3]
  • MBIO [2]
  • BIORXIV [1]
  • STRUCTURE [1]
  • TO BE PUBLISHED [1]
  • VACCINES (BASEL) [1]

Software

  • RELION [10]
  • CHIMERA [6]
  • JSPR, EMAN, EMAN2 [4]
  • EMAN, EMAN2 [3]
  • EMFIT [3]
  • AUTO3DEM, EMAN2 [2]
  • CHIMERA, SITUS [2]
  • EMAN2, AUTO3DEM [2]
  • VEDA [2]
  • EMAN [1]
  • EMAN, EMAN2, AUTO3DEM, CHIMERA [1]
  • EMAN2 [1]
  • SITUS [1]

Microscope

  • FEI TITAN KRIOS [16]
  • FEI TECNAI ARCTICA [8]
  • FEI TECNAI F20 [6]
  • FEI TECNAI F30 [6]
  • FEI POLARA 300 [4]
  • FEI/PHILIPS CM200FEG [3]
  • FEI TALOS ARCTICA [1]
  • FEI TITAN [1]
  • TFS KRIOS [1]

Electron Source

  • FIELD EMISSION GUN [45]
  • OTHER [1]

Film or detector model

  • GATAN K3 6K X 4K [15]
  • KODAK SO-163 FILM [9]
  • FEI FALCON III 4K X 4K [6]
  • GATAN K2 SUMMIT 4K X 4K [6]
  • FEI FALCON II 4K X 4K [5]
  • FEI FALCON IV 4K X 4K [3]
  • GATAN K2 QUANTUM 4K X 4K [1]
  • GATAN ULTRASCAN 4000 4K X 4K [1]

External links

  • PDB [41]
  • UniProt [28]
  • PDBe-Kb [26]
  • Gene Ontology [25]
  • InterPro [25]
  • Pfam [25]
  • ChEBI [18]
  • AlphaFold DB [4]
  • ChEMBL [4]
  • SCOP2 [4]
  • Complex Portal [3]
  • DrugBank [2]