Edit your search query here and hit Return to execute it:
natural_source_ncbi_code:"388413"

Filter By

Current Database

  • EMDB [17]

Current status

  • REL [17]

Sample type

  • Complex [16]
  • Protein [5]
  • Cell [1]

Organism

  • Algoriphagus machipongonensis [17]

EM Method

  • Single-particle [6]
  • Tomography [6]
  • Subtomogram averaging [3]
  • Helical reconstruction [2]

Resolution

  • ≥ 2Å and < 3Å [6]
  • ≥ 4Å and < 5Å [1]
  • ≥ 8Å and < 12Å [1]
  • ≥ 30Å [3]

Model molecular weight

  • 500-1000 kDa [1]
  • 1-2 MDa [2]
  • 2-5 MDa [2]

Release Date

  • 2022 [17]

Author by name

  • Eisenstein F [17]
  • Ericson C [17]
  • Ericson CF [17]
  • Feldmuller M [17]
  • King N [17]
  • Lien YW [17]
  • Pilhofer M [17]
  • Rutaganira FUN [17]
  • Xu J [17]
  • Feldmueller M [12]

Author by ORCID

  • Rutaganira FUN [17]
  • Eisenstein F [17]
  • Feldmuller M [17]
  • Ericson CF [17]
  • Pilhofer M [17]
  • Xu J [17]
  • Lien YW [17]

Journal

  • NAT MICROBIOL [17]

Software

  • IMOD [6]
  • DYNAMO [1]

Microscope

  • FEI TITAN KRIOS [17]

Electron Source

  • FIELD EMISSION GUN [17]

Film or detector model

  • GATAN K3 6K X 4K [10]
  • GATAN K2 SUMMIT 4K X 4K [6]
  • GATAN K3 BIOQUANTUM 6K X 4K [1]

External links

  • AlphaFold DB [5]
  • InterPro [5]
  • PDB [5]
  • PDBe-Kb [5]
  • Pfam [5]
  • UniProt [5]
  • Gene Ontology [4]
Sort by: Download
Showing 1 - 10 of 17. Page 1 of 2
Display:
Statistics
×

Download











































Preview first 10
Download
EMD-11745
Download Map
3D View
Cryo-EM structure of an extracellular contractile injection system in marine bacterium Algoriphagus machipongonensis, the baseplate complex in extended state applied 3-fold symmetry.
Release date: Feb. 23, 2022
Resolution: 2.8 Å
EM Method: Single-particle
Fitted PDBs: 7aef
Q-score: 0.529

Xu J, Ericson CF, Lien YW, Rutaganira FUN, Eisenstein F, Feldmuller M, King N, Pilhofer M

Nat Microbiol (2022) 7 pp. 397-410 [ DOI: doi:10.1038/s41564-022-01059-2 Pubmed: 35165385 ]

EMD-11734
Download Map
3D View
Cryo-EM structure of an extracellular contractile injection system in marine bacterium Algoriphagus machipongonensis, the cap portion in extended state.
Release date: Feb. 16, 2022
Resolution: 2.5 Å
EM Method: Single-particle
Fitted PDBs: 7adz
Q-score: 0.611

Xu J, Ericson CF, Lien YW, Rutaganira FUN, Eisenstein F, Feldmuller M, King N, Pilhofer M

Nat Microbiol (2022) 7 pp. 397-410 [ DOI: doi:10.1038/s41564-022-01059-2 Pubmed: 35165385 ]

EMD-11735
Download Map
3D View
Cryo-EM structure of an extracellular contractile injection system in marine bacterium Algoriphagus machipongonensis, the sheath-tube module in extended state.
Release date: Feb. 16, 2022
Resolution: 2.4 Å
EM Method: Helical reconstruction
Fitted PDBs: 7ae0
Q-score: 0.625

Xu J, Ericson CF, Lien YW, Rutaganira FUN, Eisenstein F, Feldmuller M, King N, Pilhofer M

Nat Microbiol (2022) 7 pp. 397-410 [ DOI: doi:10.1038/s41564-022-01059-2 Pubmed: 35165385 ]

EMD-11743
Download Map
3D View
Cryo-EM structure of an extracellular contractile injection system in marine bacterium Algoriphagus machipongonensis, the baseplate complex in extended state applied 6-fold symmetry.
Release date: Feb. 16, 2022
Resolution: 2.7 Å
EM Method: Single-particle
Fitted PDBs: 7aeb
Q-score: 0.544

Xu J, Ericson CF, Lien YW, Rutaganira FUN, Eisenstein F, Feldmuller M, King N, Pilhofer M

Nat Microbiol (2022) 7 pp. 397-410 [ DOI: doi:10.1038/s41564-022-01059-2 Pubmed: 35165385 ]

EMD-11744
Download Map
3D View
Focused refined cryo-EM structure of an extracellular contractile injection system in marine bacterium Algoriphagus machipongonensis, the baseplate complex in extended state applied 6-fold symmetry
Release date: Feb. 16, 2022
Resolution: 2.9 Å
EM Method: Single-particle

Xu J, Ericson CF, Lien YW, Rutaganira FUN, Eisenstein F, Feldmuller M, King N, Pilhofer M

Nat Microbiol (2022) 7 pp. 397-410 [ DOI: doi:10.1038/s41564-022-01059-2 Pubmed: 35165385 ]

EMD-11746
Download Map
3D View
Cryo-EM structure of the overall extracellular contractile injection system in marine bacterium Algoriphagus machipongonensis
Release date: Feb. 16, 2022
Resolution: 4.4 Å
EM Method: Single-particle

Xu J, Ericson CF, Lien YW, Rutaganira FUN, Eisenstein F, Feldmuller M, King N, Pilhofer M

Nat Microbiol (2022) 7 pp. 397-410 [ DOI: doi:10.1038/s41564-022-01059-2 Pubmed: 35165385 ]

EMD-11747
Download Map
3D View
Cryo-EM structure of an extracellular contractile injection system in marine bacterium Algoriphagus machipongonensis, the contracted sheath shell.
Release date: Feb. 16, 2022
Resolution: 2.5 Å
EM Method: Helical reconstruction
Fitted PDBs: 7aek
Q-score: 0.621

Xu J, Ericson CF, Lien YW, Rutaganira FUN, Eisenstein F, Feldmuller M, King N, Pilhofer M

Nat Microbiol (2022) 7 pp. 397-410 [ DOI: doi:10.1038/s41564-022-01059-2 Pubmed: 35165385 ]

EMD-11748
Download Map
3D View
Cryo-EM structure of an extracellular contractile injection system in marine bacterium Algoriphagus machipongonensis, the baseplate complex in contracted state.
Release date: Feb. 16, 2022
Resolution: 8.9 Å
EM Method: Single-particle

Xu J, Ericson CF, Lien YW, Rutaganira FUN, Eisenstein F, Feldmuller M, King N, Pilhofer M

Nat Microbiol (2022) 7 pp. 397-410 [ DOI: doi:10.1038/s41564-022-01059-2 Pubmed: 35165385 ]

EMD-11749
Download Map
3D View
sub-tomogram averaging of an extracellular contractile injection system in marine bacterium Algoriphagus machipongonensis
Release date: Feb. 16, 2022
Resolution: 44.0 Å
EM Method: Subtomogram averaging

Xu J, Ericson CF, Lien YW, Rutaganira FUN, Eisenstein F, Feldmuller M, King N, Pilhofer M

Nat Microbiol (2022) 7 pp. 397-410 [ DOI: doi:10.1038/s41564-022-01059-2 Pubmed: 35165385 ]

EMD-11750
Download Map
3D View
sub-tomogram averaging of an extracellular contractile injection system mutant effector deficient mutant in marine bacterium Algoriphagus machipongonensis
Release date: Feb. 16, 2022
Resolution: 32.0 Å
EM Method: Subtomogram averaging

Xu J, Ericson CF, Lien YW, Rutaganira FUN, Eisenstein F, Feldmuller M, King N, Pilhofer M

Nat Microbiol (2022) 7 pp. 397-410 [ DOI: doi:10.1038/s41564-022-01059-2 Pubmed: 35165385 ]

Sort by: Download
Showing 1 - 10 of 17. Page 1 of 2
Display:
Statistics
×

Download











































Preview first 10
Download

Filter By

Current Database

  • EMDB [17]

Current status

  • REL [17]

Sample type

  • Complex [16]
  • Protein [5]
  • Cell [1]

Organism

  • Algoriphagus machipongonensis [17]

EM Method

  • Single-particle [6]
  • Tomography [6]
  • Subtomogram averaging [3]
  • Helical reconstruction [2]

Resolution

  • ≥ 2Å and < 3Å [6]
  • ≥ 4Å and < 5Å [1]
  • ≥ 8Å and < 12Å [1]
  • ≥ 30Å [3]

Model molecular weight

  • 500-1000 kDa [1]
  • 1-2 MDa [2]
  • 2-5 MDa [2]

Release Date

  • 2022 [17]

Author by name

  • Eisenstein F [17]
  • Ericson C [17]
  • Ericson CF [17]
  • Feldmuller M [17]
  • King N [17]
  • Lien YW [17]
  • Pilhofer M [17]
  • Rutaganira FUN [17]
  • Xu J [17]
  • Feldmueller M [12]

Author by ORCID

  • Rutaganira FUN [17]
  • Eisenstein F [17]
  • Feldmuller M [17]
  • Ericson CF [17]
  • Pilhofer M [17]
  • Xu J [17]
  • Lien YW [17]

Journal

  • NAT MICROBIOL [17]

Software

  • IMOD [6]
  • DYNAMO [1]

Microscope

  • FEI TITAN KRIOS [17]

Electron Source

  • FIELD EMISSION GUN [17]

Film or detector model

  • GATAN K3 6K X 4K [10]
  • GATAN K2 SUMMIT 4K X 4K [6]
  • GATAN K3 BIOQUANTUM 6K X 4K [1]

External links

  • AlphaFold DB [5]
  • InterPro [5]
  • PDB [5]
  • PDBe-Kb [5]
  • Pfam [5]
  • UniProt [5]
  • Gene Ontology [4]