Edit your search query here and hit Return to execute it:
natural_source_ncbi_code:"376686"

Filter By

Current Database

  • EMDB [18]

Current status

  • REL [18]

Sample type

  • Complex [18]
  • Protein [13]
  • Ligand [8]

Organism

  • Flavobacterium johnsoniae [18]
  • Flavobacterium johnsoniae [9]

EM Method

  • Single-particle [18]

Resolution

  • ≥ 2Å and < 3Å [10]
  • ≥ 3Å and < 4Å [8]

Model molecular weight

  • 100-250 kDa [2]
  • 250-500 kDa [7]
  • 500-1000 kDa [1]

Release Date

  • 2025 [6]
  • 2024 [9]
  • 2018 [3]

Author by name

  • Berks BC [15]
  • Deme JC [15]
  • Lea SM [15]
  • Liu X [15]
  • Alcock F [9]
  • Kjaer A [9]
  • Lauber F [9]
  • Miller HL [9]
  • Orenday Tapia L [6]
  • Benlekbir S [3]
  • Gennis RB [3]
  • Hong S [3]
  • Hosler J [3]
  • Rubinstein JL [3]
  • Sun C [3]
  • Tajkhorshid E [3]
  • Venkatakrishnan P [3]
  • Wang Y [3]

Author by ORCID

  • Sun C [3]
  • Wang Y [3]

Journal

  • NAT MICROBIOL [9]
  • TO BE PUBLISHED [6]
  • NATURE [3]

Software

  • RELION [9]
  • SIMPLE [5]
  • CRYOSPARC [4]
  • CTFFIND [2]

Microscope

  • FEI TITAN KRIOS [12]
  • TFS KRIOS [6]

Electron Source

  • FIELD EMISSION GUN [18]

Film or detector model

  • GATAN K3 BIOQUANTUM 6K X 4K [9]
  • TFS FALCON 4I 4K X 4K [6]
  • GATAN K2 SUMMIT 4K X 4K [3]

External links

  • AlphaFold DB [11]
  • UniProt [11]
  • PDB [10]
  • Pfam [10]
  • PDBe-Kb [8]
  • Gene Ontology [7]
  • InterPro [7]
  • ChEBI [3]
  • ChEMBL [3]
  • DrugBank [3]
Sort by: Download
Showing 1 - 10 of 18. Page 1 of 2
Display:
Statistics
×

Download











































Preview first 10
Download
EMD-48837
Download Map
3D View
Cryo-EM structure of F. johnsoniae BamAD
Release date: July 16, 2025
Resolution: 3.5 Å
EM Method: Single-particle
Fitted PDBs: 9n2f
Q-score: 0.399

Liu X, Orenday Tapia L, Deme JC, Lea SM, Berks BC

To Be Published

EMD-48832
Download Map
3D View
Cryo-EM structure of an extended F. johnsoniae BAM complex, consensus map
Release date: July 9, 2025
Resolution: 2.7 Å
EM Method: Single-particle

Liu X, Orenday Tapia L, Deme JC, Lea SM, Berks BC

To Be Published

EMD-48833
Download Map
3D View
Cryo-EM structure of an extended F. johnsoniae BAM complex, BamGM-focused map
Release date: July 9, 2025
Resolution: 2.7 Å
EM Method: Single-particle

Liu X, Orenday Tapia L, Deme JC, Lea SM, Berks BC

To Be Published

EMD-48834
Download Map
3D View
Cryo-EM structure of an extended F. johnsoniae BAM complex, BamADP-focused map
Release date: July 9, 2025
Resolution: 3.3 Å
EM Method: Single-particle

Liu X, Orenday Tapia L, Deme JC, Lea SM, Berks BC

To Be Published

EMD-48835
Composite map
Download Map
3D View
Cryo-EM structure of an extended F. johnsoniae BAM complex, composite map
Release date: July 9, 2025
Resolution: 2.7 Å
EM Method: Single-particle
Fitted PDBs: 9n2d
Q-score: 0.556

Liu X, Orenday Tapia L, Deme JC, Lea SM, Berks BC

To Be Published

EMD-48836
Download Map
3D View
Cryo-EM structure of F. johnsoniae BamAP
Release date: July 9, 2025
Resolution: 3.7 Å
EM Method: Single-particle
Fitted PDBs: 9n2e
Q-score: 0.408

Liu X, Orenday Tapia L, Deme JC, Lea SM, Berks BC

To Be Published

EMD-29911
Download Map
3D View
The Type 9 Secretion System Extended Translocon - delta GldL, Peak I, SprA-PorV-RemZ-PPI focused volume
Release date: Jan. 31, 2024
Resolution: 2.4 Å
EM Method: Single-particle

Lauber F, Deme JC, Liu X, Kjaer A, Miller HL, Alcock F, Lea SM, Berks BC

Nat Microbiol (2024) [ ]

EMD-40085
Download Map
3D View
The Type 9 Secretion System Extended Translocon - delta GldL, Peak I, SprE-SkpA-Nterm SprA focused volume
Release date: Jan. 31, 2024
Resolution: 2.8 Å
EM Method: Single-particle

Lauber F, Deme JC, Liu X, Kjaer A, Miller HL, Alcock F, Lea SM, Berks BC

Nat Microbiol (2024) [ ]

EMD-40086
Download Map
3D View
The Type 9 Secretion System Extended Translocon - delta GldL, Peak I, consensus volume
Release date: Jan. 31, 2024
Resolution: 2.45 Å
EM Method: Single-particle

Lauber F, Deme JC, Liu X, Kjaer A, Miller HL, Alcock F, Lea SM, Berks BC

Nat Microbiol (2024) [ ]

EMD-40191
Download Map
3D View
The Type 9 Secretion System in vitro assembled, RemA-CTD substrate bound complex
Release date: Jan. 31, 2024
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 8gl6
Q-score: 0.524

Lauber F, Deme JC, Liu X, Kjaer A, Miller HL, Alcock F, Lea SM, Berks BC

Nat Microbiol (2024) [ ]

Sort by: Download
Showing 1 - 10 of 18. Page 1 of 2
Display:
Statistics
×

Download











































Preview first 10
Download

Filter By

Current Database

  • EMDB [18]

Current status

  • REL [18]

Sample type

  • Complex [18]
  • Protein [13]
  • Ligand [8]

Organism

  • Flavobacterium johnsoniae [18]
  • Flavobacterium johnsoniae [9]

EM Method

  • Single-particle [18]

Resolution

  • ≥ 2Å and < 3Å [10]
  • ≥ 3Å and < 4Å [8]

Model molecular weight

  • 100-250 kDa [2]
  • 250-500 kDa [7]
  • 500-1000 kDa [1]

Release Date

  • 2025 [6]
  • 2024 [9]
  • 2018 [3]

Author by name

  • Berks BC [15]
  • Deme JC [15]
  • Lea SM [15]
  • Liu X [15]
  • Alcock F [9]
  • Kjaer A [9]
  • Lauber F [9]
  • Miller HL [9]
  • Orenday Tapia L [6]
  • Benlekbir S [3]
  • Gennis RB [3]
  • Hong S [3]
  • Hosler J [3]
  • Rubinstein JL [3]
  • Sun C [3]
  • Tajkhorshid E [3]
  • Venkatakrishnan P [3]
  • Wang Y [3]

Author by ORCID

  • Sun C [3]
  • Wang Y [3]

Journal

  • NAT MICROBIOL [9]
  • TO BE PUBLISHED [6]
  • NATURE [3]

Software

  • RELION [9]
  • SIMPLE [5]
  • CRYOSPARC [4]
  • CTFFIND [2]

Microscope

  • FEI TITAN KRIOS [12]
  • TFS KRIOS [6]

Electron Source

  • FIELD EMISSION GUN [18]

Film or detector model

  • GATAN K3 BIOQUANTUM 6K X 4K [9]
  • TFS FALCON 4I 4K X 4K [6]
  • GATAN K2 SUMMIT 4K X 4K [3]

External links

  • AlphaFold DB [11]
  • UniProt [11]
  • PDB [10]
  • Pfam [10]
  • PDBe-Kb [8]
  • Gene Ontology [7]
  • InterPro [7]
  • ChEBI [3]
  • ChEMBL [3]
  • DrugBank [3]