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Filter By

Current Database

  • EMDB [43]

Current status

  • REL [43]

Sample type

  • Cellular component [23]
  • Sample [20]
  • Complex [18]
  • Protein [10]

Organism

  • Myxococcus xanthus [43]

EM Method

  • Single-particle [22]
  • Subtomogram averaging [21]

Resolution

  • ≥ 2Å and < 3Å [2]
  • ≥ 3Å and < 4Å [6]
  • ≥ 4Å and < 5Å [7]
  • ≥ 5Å and < 6Å [2]
  • ≥ 6Å and < 8Å [4]
  • ≥ 8Å and < 12Å [1]
  • ≥ 16Å and < 20Å [1]
  • ≥ 20Å and < 30Å [1]
  • ≥ 30Å [1]

Model molecular weight

  • 100-250 kDa [3]
  • 2-5 MDa [3]
  • 5-10 MDa [5]

Release Date

  • 2025 [1]
  • 2024 [16]
  • 2022 [4]
  • 2018 [2]
  • 2016 [18]
  • 2014 [2]

Author by name

  • Sogaard-andersen L [20]
  • Chang YW [18]
  • Iwasa J [18]
  • Jensen GJ [18]
  • Rettberg LA [18]
  • Treuner-lange A [18]
  • Alvarez Barkane Am [11]
  • Bhattacharya S [11]
  • Bourque AR [11]
  • Finn MG [11]
  • Hernandez C [11]
  • Jenkins MC [11]
  • Keshavarz-joud P [11]
  • Kopylov M [11]
  • White K [11]
  • Bryksin AV [10]
  • Steven AC [6]
  • Winkler DC [6]
  • Eren E [5]
  • Watts NR [5]
  • Wingfield PT [5]
  • Plitzko J [4]
  • Plitzko JM [4]
  • Wang B [4]
  • Aksyuk AA [2]
  • Baumeister W [2]
  • Beck F [2]
  • Bernal-bernal D [2]
  • Bricault S [2]
  • Cheng N [2]
  • Desai M [2]
  • Dickmanns M [2]
  • Elias-arnanz M [2]
  • Erdmann P [2]
  • Erdmann PS [2]
  • Fontana J [2]
  • Fuchs H [2]
  • Galbis-martinez M [2]
  • Geerlof A [2]
  • Harms A [2]
  • Heck AJR [2]
  • Heymann JB [2]
  • Hoiczyk E [2]
  • Hrabe De Angelis M [2]
  • Jasanoff A [2]
  • Lam AS [2]
  • Liu C [2]
  • Lopez-alonso JP [2]
  • Lopez-rojo A [2]
  • Lopez-ruiz JA [2]
  • Massner C [2]
  • Mchugh CA [2]
  • Nemecek D [2]
  • Ntziachristos V [2]
  • Ochoa-lizarralde B [2]
  • Padmanabhan S [2]
  • Pantoja-uceda D [2]
  • Rolbieski H [2]
  • Schumacher D [2]
  • Sigmund F [2]
  • Snijder J [2]
  • Stelzl A [2]
  • Tascon I [2]
  • Ubarretxena-belandia I [2]
  • Wall JS [2]
  • Westmeyer GG [2]
  • Worner TP [2]
  • Xu P [2]
  • Berks BC [1]
  • Bryant OJ [1]
  • Bryksin A [1]
  • Conway JF [1]
  • Deme JC [1]
  • Lea SM [1]
  • Rettberg L [1]

Author by ORCID

  • Treuner-lange A [18]
  • Sogaard-andersen L [18]
  • Chang YW [18]
  • Rettberg LA [17]
  • Finn MG [10]
  • Winkler DC [6]
  • Eren E [5]
  • Wang B [4]
  • Xu P [2]
  • Westmeyer GG [2]
  • Baumeister W [2]
  • Erdmann P [2]
  • Aksyuk AA [2]
  • Bricault S [2]
  • Heck AJR [2]
  • Sigmund F [2]
  • Fuchs H [2]
  • Ochoa-lizarralde B [2]
  • Plitzko J [2]
  • Plitzko JM [2]
  • Hrabe De Angelis M [2]
  • Padmanabhan S [2]
  • Heymann JB [2]
  • Fontana J [2]
  • Ntziachristos V [2]
  • Galbis-martinez M [2]
  • Elias-arnanz M [2]
  • Lopez-alonso JP [2]
  • Tascon I [2]
  • Dickmanns M [2]
  • Ubarretxena-belandia I [2]
  • Pantoja-uceda D [2]
  • Bernal-bernal D [2]
  • Lopez-rojo A [2]
  • Watts NR [1]
  • Deme JC [1]
  • Lea SM [1]
  • Berks BC [1]
  • Rettberg L [1]
  • Conway JF [1]
  • Bryant OJ [1]

Journal

  • SCIENCE [18]
  • BIORXIV [10]
  • STRUCTURE [4]
  • PNAS [3]
  • EMBO J [2]
  • NAT COMMUN [2]
  • SCI ADV [2]
  • TO BE PUBLISHED [2]

Software

  • IMOD, TOMO3D, PEET [18]
  • CRYOSPARC [14]
  • RELION [5]
  • CTFFIND [3]
  • BSOFT [2]
  • PYTOM [2]
  • STOPGAP [1]
  • WARP [1]

Microscope

  • FEI POLARA 300 [15]
  • FEI TITAN KRIOS [11]
  • TFS GLACIOS [11]
  • TFS KRIOS [5]
  • FEI/PHILIPS CM200FEG [1]

Electron Source

  • FIELD EMISSION GUN [41]
  • LAB6 [2]

Film or detector model

  • GATAN K2 SUMMIT 4K X 4K [25]
  • FEI FALCON III 4K X 4K [11]
  • GATAN K3 BIOQUANTUM 6K X 4K [3]
  • FEI FALCON IV 4K X 4K [2]
  • KODAK SO-163 FILM [1]

External links

  • PDB [11]
  • UniProt [9]
  • AlphaFold DB [8]
  • Gene Ontology [7]
  • InterPro [7]
  • PDBe-Kb [7]
  • Pfam [7]
Sort by: Download
Showing 1 - 10 of 43. Page 1 of 5
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EMD-47347
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3D View
Cryo-EM structure of a TatBC complex from Myxococcus xanthus
Release date: Aug. 27, 2025
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 9e03
Q-score: 0.453

Deme JC, Bryant OJ, Berks BC, Lea SM

To Be Published

EMD-19404
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3D View
Cryo-EM structure of the transmembrane anti-sigma factor DdvA
Release date: Nov. 6, 2024
Resolution: 3.11 Å
EM Method: Single-particle
Fitted PDBs: 8rot
Q-score: 0.538

Bernal-Bernal D, Pantoja-Uceda D, Lopez-Alonso JP, Lopez-Rojo A, Lopez-Ruiz JA, Galbis-Martinez M, Ochoa-Lizarralde B, Tascon I, Elias-Arnanz M, Ubarretxena-Belandia I, Padmanabhan S

Sci Adv (2024) 10 pp. eadp1053-eadp1053 [ Pubmed: 39454004 DOI: doi:10.1126/sciadv.adp1053 ]

EMD-19543
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Symmetry expansion of dimeric transmembrane anti-sigma factor DdvA
Release date: Nov. 6, 2024
Resolution: 2.94 Å
EM Method: Single-particle
Fitted PDBs: 8rw5
Q-score: 0.577

Bernal-Bernal D, Pantoja-Uceda D, Lopez-Alonso JP, Lopez-Rojo A, Lopez-Ruiz JA, Galbis-Martinez M, Ochoa-Lizarralde B, Tascon I, Elias-Arnanz M, Ubarretxena-Belandia I, Padmanabhan S

Sci Adv (2024) 10 pp. eadp1053-eadp1053 [ Pubmed: 39454004 DOI: doi:10.1126/sciadv.adp1053 ]

EMD-50504
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3D View
in situ 70S Myxococcus xanthus ribosome
Release date: July 3, 2024
Resolution: 6.0 Å
EM Method: Subtomogram averaging

Xu P, Schumacher D, Liu C, Harms A, Dickmanns M, Beck F, Plitzko JM, Baumeister W, Sogaard-Andersen L

PNAS (2025) 122 pp. e2419610121-e2419610121 [ Pubmed: 39739804 DOI: doi:10.1073/pnas.2419610121 ]

EMD-50515
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PomX filament from Myxococcus xanthus
Release date: June 26, 2024
Resolution: 10.0 Å
EM Method: Single-particle

Xu P, Schumacher D, Liu C, Harms A, Dickmanns M, Beck F, Plitzko JM, Baumeister W, Sogaard-Andersen L

PNAS (2025) 122 pp. e2419610121-e2419610121 [ Pubmed: 39739804 DOI: doi:10.1073/pnas.2419610121 ]

EMD-43290
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Cryo-EM structure of Myxococcus xanthus EncA encapsulin shell loaded with EncD cargo
Release date: May 8, 2024
Resolution: 2.4 Å
EM Method: Single-particle
Fitted PDBs: 8vjo
Q-score: 0.652

Eren E, Watts NR, Conway JF, Wingfield PT

PNAS (2024) 121 pp. e2400426121-e2400426121 [ Pubmed: 38748579 DOI: doi:10.1073/pnas.2400426121 ]

EMD-43013
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Myxococcus xanthus HEnc-K417N A protein shell with icosahedral T 1 symmetry
Release date: Jan. 17, 2024
Resolution: 4.91 Å
EM Method: Single-particle

Bhattacharya S, Jenkins MC, Keshavarz-Joud P, Bourque AR, White K, Alvarez Barkane AM, Bryksin AV, Hernandez C, Kopylov M, Finn MG

bioRxiv (2024) [ Pubmed: 38464232 DOI: doi:10.1101/2024.02.24.581861 ]

EMD-43016
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Myxococcus xanthus HEnc-K417N A protein shell with tetrahedral symmetry 12 pentamers, 4 hexamers
Release date: Jan. 17, 2024
Resolution: 4.91 Å
EM Method: Single-particle

Bhattacharya S, Jenkins MC, Keshavarz-Joud P, Bourque AR, White K, Alvarez Barkane AM, Bryksin AV, Hernandez C, Kopylov M, Finn MG

bioRxiv (2024) [ Pubmed: 38464232 DOI: doi:10.1101/2024.02.24.581861 ]

EMD-43036
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Myxococcus xanthus HEnc-K417N A protein shell with icosahedral T 3 symmetry
Release date: Jan. 17, 2024
Resolution: 4.91 Å
EM Method: Single-particle

Bhattacharya S, Jenkins MC, Keshavarz-Joud P, Bourque AR, White K, Alvarez Barkane AM, Bryksin A, Hernandez C, Kopylov M, Finn MG

To Be Published

EMD-43037
Download Map
3D View
Myxococcus xanthus HEnc-K417N A protein shell with D3 symmetry 12 pentamers, 3 hexamers
Release date: Jan. 17, 2024
Resolution: 4.91 Å
EM Method: Single-particle

Bhattacharya S, Jenkins MC, Keshavarz-Joud P, Bourque AR, White K, Alvarez Barkane AM, Bryksin AV, Hernandez C, Kopylov M, Finn MG

bioRxiv (2024) [ Pubmed: 38464232 DOI: doi:10.1101/2024.02.24.581861 ]

Sort by: Download
Showing 1 - 10 of 43. Page 1 of 5
Display:
Statistics
×

Download











































Preview first 10
Download

Filter By

Current Database

  • EMDB [43]

Current status

  • REL [43]

Sample type

  • Cellular component [23]
  • Sample [20]
  • Complex [18]
  • Protein [10]

Organism

  • Myxococcus xanthus [43]

EM Method

  • Single-particle [22]
  • Subtomogram averaging [21]

Resolution

  • ≥ 2Å and < 3Å [2]
  • ≥ 3Å and < 4Å [6]
  • ≥ 4Å and < 5Å [7]
  • ≥ 5Å and < 6Å [2]
  • ≥ 6Å and < 8Å [4]
  • ≥ 8Å and < 12Å [1]
  • ≥ 16Å and < 20Å [1]
  • ≥ 20Å and < 30Å [1]
  • ≥ 30Å [1]

Model molecular weight

  • 100-250 kDa [3]
  • 2-5 MDa [3]
  • 5-10 MDa [5]

Release Date

  • 2025 [1]
  • 2024 [16]
  • 2022 [4]
  • 2018 [2]
  • 2016 [18]
  • 2014 [2]

Author by name

  • Sogaard-andersen L [20]
  • Chang YW [18]
  • Iwasa J [18]
  • Jensen GJ [18]
  • Rettberg LA [18]
  • Treuner-lange A [18]
  • Alvarez Barkane Am [11]
  • Bhattacharya S [11]
  • Bourque AR [11]
  • Finn MG [11]
  • Hernandez C [11]
  • Jenkins MC [11]
  • Keshavarz-joud P [11]
  • Kopylov M [11]
  • White K [11]
  • Bryksin AV [10]
  • Steven AC [6]
  • Winkler DC [6]
  • Eren E [5]
  • Watts NR [5]
  • Wingfield PT [5]
  • Plitzko J [4]
  • Plitzko JM [4]
  • Wang B [4]
  • Aksyuk AA [2]
  • Baumeister W [2]
  • Beck F [2]
  • Bernal-bernal D [2]
  • Bricault S [2]
  • Cheng N [2]
  • Desai M [2]
  • Dickmanns M [2]
  • Elias-arnanz M [2]
  • Erdmann P [2]
  • Erdmann PS [2]
  • Fontana J [2]
  • Fuchs H [2]
  • Galbis-martinez M [2]
  • Geerlof A [2]
  • Harms A [2]
  • Heck AJR [2]
  • Heymann JB [2]
  • Hoiczyk E [2]
  • Hrabe De Angelis M [2]
  • Jasanoff A [2]
  • Lam AS [2]
  • Liu C [2]
  • Lopez-alonso JP [2]
  • Lopez-rojo A [2]
  • Lopez-ruiz JA [2]
  • Massner C [2]
  • Mchugh CA [2]
  • Nemecek D [2]
  • Ntziachristos V [2]
  • Ochoa-lizarralde B [2]
  • Padmanabhan S [2]
  • Pantoja-uceda D [2]
  • Rolbieski H [2]
  • Schumacher D [2]
  • Sigmund F [2]
  • Snijder J [2]
  • Stelzl A [2]
  • Tascon I [2]
  • Ubarretxena-belandia I [2]
  • Wall JS [2]
  • Westmeyer GG [2]
  • Worner TP [2]
  • Xu P [2]
  • Berks BC [1]
  • Bryant OJ [1]
  • Bryksin A [1]
  • Conway JF [1]
  • Deme JC [1]
  • Lea SM [1]
  • Rettberg L [1]

Author by ORCID

  • Treuner-lange A [18]
  • Sogaard-andersen L [18]
  • Chang YW [18]
  • Rettberg LA [17]
  • Finn MG [10]
  • Winkler DC [6]
  • Eren E [5]
  • Wang B [4]
  • Xu P [2]
  • Westmeyer GG [2]
  • Baumeister W [2]
  • Erdmann P [2]
  • Aksyuk AA [2]
  • Bricault S [2]
  • Heck AJR [2]
  • Sigmund F [2]
  • Fuchs H [2]
  • Ochoa-lizarralde B [2]
  • Plitzko J [2]
  • Plitzko JM [2]
  • Hrabe De Angelis M [2]
  • Padmanabhan S [2]
  • Heymann JB [2]
  • Fontana J [2]
  • Ntziachristos V [2]
  • Galbis-martinez M [2]
  • Elias-arnanz M [2]
  • Lopez-alonso JP [2]
  • Tascon I [2]
  • Dickmanns M [2]
  • Ubarretxena-belandia I [2]
  • Pantoja-uceda D [2]
  • Bernal-bernal D [2]
  • Lopez-rojo A [2]
  • Watts NR [1]
  • Deme JC [1]
  • Lea SM [1]
  • Berks BC [1]
  • Rettberg L [1]
  • Conway JF [1]
  • Bryant OJ [1]

Journal

  • SCIENCE [18]
  • BIORXIV [10]
  • STRUCTURE [4]
  • PNAS [3]
  • EMBO J [2]
  • NAT COMMUN [2]
  • SCI ADV [2]
  • TO BE PUBLISHED [2]

Software

  • IMOD, TOMO3D, PEET [18]
  • CRYOSPARC [14]
  • RELION [5]
  • CTFFIND [3]
  • BSOFT [2]
  • PYTOM [2]
  • STOPGAP [1]
  • WARP [1]

Microscope

  • FEI POLARA 300 [15]
  • FEI TITAN KRIOS [11]
  • TFS GLACIOS [11]
  • TFS KRIOS [5]
  • FEI/PHILIPS CM200FEG [1]

Electron Source

  • FIELD EMISSION GUN [41]
  • LAB6 [2]

Film or detector model

  • GATAN K2 SUMMIT 4K X 4K [25]
  • FEI FALCON III 4K X 4K [11]
  • GATAN K3 BIOQUANTUM 6K X 4K [3]
  • FEI FALCON IV 4K X 4K [2]
  • KODAK SO-163 FILM [1]

External links

  • PDB [11]
  • UniProt [9]
  • AlphaFold DB [8]
  • Gene Ontology [7]
  • InterPro [7]
  • PDBe-Kb [7]
  • Pfam [7]