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natural_source_ncbi_code:"337041"

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Current Database

  • EMDB [12]

Current status

  • REL [12]

Sample type

  • Virus [12]
  • Sample [11]
  • Protein [7]

Organism

  • Alphapapillomavirus 9 [12]
  • Mus musculus [6]

EM Method

  • Single-particle [12]

Resolution

  • ≥ 4Å and < 5Å [2]
  • ≥ 8Å and < 12Å [2]
  • ≥ 12Å and < 16Å [7]
  • ≥ 30Å [1]

Model molecular weight

  • > 10 MDa [6]

Release Date

  • 2017 [3]
  • 2015 [3]
  • 2014 [6]

Author by name

  • Ashley RE [11]
  • Brendle SA [11]
  • Bywaters SM [11]
  • Christensen ND [11]
  • Conway JF [11]
  • Guan J [11]
  • Hafenstein S [11]
  • Makhov AM [11]
  • Lee H [9]
  • Yoder JD [6]
  • Ashley R [1]
  • Brendle S [1]
  • Bywaters S [1]
  • Christensen N [1]
  • Gu Y [1]
  • Li S [1]
  • Li SW [1]
  • Li Z [1]
  • Li ZH [1]
  • Pan H [1]
  • Wang D [1]
  • Wei M [1]
  • Wu T [1]
  • Xia N [1]
  • Xie M [1]
  • Yan XD [1]
  • Zhang J [1]
  • Zheng QB [1]

Author by ORCID

  • Ashley RE [11]
  • Conway JF [11]
  • Bywaters SM [11]
  • Lee H [9]
  • Wu T [1]
  • Xia N [1]

Journal

  • J VIROL [6]
  • VIROLOGY [3]
  • STRUCTURE [2]
  • VACCINE [1]

Software

  • AUTO3DEM [11]
  • CHIMERA, SITUS [4]
  • PHENIX, SITUS, NAMD [1]
  • RELION [1]

Microscope

  • JEOL 2100 [6]
  • FEI TECNAI F20 [3]
  • FEI POLARA 300 [2]
  • FEI TECNAI F30 [1]

Electron Source

  • FIELD EMISSION GUN [6]
  • LAB6 [6]

Film or detector model

  • GATAN ULTRASCAN 4000 4K X 4K [6]
  • KODAK SO-163 FILM [3]
  • FEI FALCON II 4K X 4K [2]
  • FEI FALCON I 4K X 4K [1]

External links

  • PDB [6]
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Showing 1 - 10 of 12. Page 1 of 2
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EMD-6795
Download Map
3D View
CryoEM structure of HPV16 L1-only VLP
Release date: Sept. 6, 2017
Resolution: 30.0 Å
EM Method: Single-particle

Gu Y, Wei M, Wang D, Li Z, Xie M, Pan H, Wu T, Zhang J, Li S, Xia N

Vaccine (2017) 35 pp. 4637-4645 [ DOI: doi:10.1016/j.vaccine.2017.06.084 Pubmed: 28736197 ]

EMD-6619
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3D View
Electron cryo-microscopy of Human Papillomavirus
Release date: Jan. 25, 2017
Resolution: 4.3 Å
EM Method: Single-particle
Fitted PDBs: 5keq
Q-score: 0.287

Guan J, Bywaters SM, Brendle SA, Ashley RE, Makhov AM, Conway JF, Christensen ND, Hafenstein S

Structure (2017) 25 pp. 253-263 [ DOI: doi:10.1016/j.str.2016.12.001 Pubmed: 28065506 ]

EMD-6620
Download Map
3D View
Electron cryo-microscopy of Human Papillomavirus
Release date: Jan. 25, 2017
Resolution: 4.3 Å
EM Method: Single-particle
Fitted PDBs: 5kep
Q-score: 0.333

Guan J, Bywaters SM, Brendle SA, Ashley RE, Makhov AM, Conway JF, Christensen ND, Hafenstein S

Structure (2017) 25 pp. 253-263 [ DOI: doi:10.1016/j.str.2016.12.001 Pubmed: 28065506 ]

EMD-5990
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3D View
Electron cryo-microscopy of quasi-human papillomavirus 16 complexed with Fab H16.1A
Release date: May 6, 2015
Resolution: 14.0 Å
EM Method: Single-particle
Fitted PDBs: 3j8z
Q-score: 0.021

Guan J, Bywaters SM, Brendle SA, Lee H, Ashley RE, Makhov AM, Conway JF, Christensen ND, Hafenstein S

Virology (2015) 483 pp. 253-263 [ DOI: doi:10.1016/j.virol.2015.04.016 Pubmed: 25996608 ]

EMD-6121
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Cryo-EM reconstruction of quasi-HPV16 complexed with H16.14J Fab
Release date: May 6, 2015
Resolution: 13.9 Å
EM Method: Single-particle
Fitted PDBs: 3j8v
Q-score: 0.068

Guan J, Bywaters SM, Brendle SA, Lee H, Ashley RE, Makhov AM, Conway JF, Christensen ND, Hafenstein S

Virology (2015) 483 pp. 253-263 [ DOI: doi:10.1016/j.virol.2015.04.016 Pubmed: 25996608 ]

EMD-6184
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3D View
Cryo-EM reconstruction of quasi-HPV16 complexed with H263.A2 Fab
Release date: May 6, 2015
Resolution: 13.0 Å
EM Method: Single-particle
Fitted PDBs: 3j8w
Q-score: 0.067

Guan J, Bywaters SM, Brendle SA, Lee H, Ashley RE, Makhov AM, Conway JF, Christensen ND, Hafenstein S

Virology (2015) 483 pp. 253-263 [ DOI: doi:10.1016/j.virol.2015.04.016 Pubmed: 25996608 ]

EMD-6118
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3D View
Electron cryo-microscopy of human papillomavirus 16 and H16.V5 Fab fragments
Release date: Dec. 3, 2014
Resolution: 15.8 Å
EM Method: Single-particle

Lee H, Brendle SA, Bywaters SM, Guan J, Ashley RE, Yoder JD, Makhov AM, Conway JF, Christensen ND, Hafenstein S

J Virol (2015) 89 pp. 1428-1438 [ Pubmed: 25392224 DOI: doi:10.1128/JVI.02898-14 ]

EMD-6119
Download Map
3D View
Electron cryo-microscopy of human papillomavirus 16 and H16.V5 Fab fragments
Release date: Dec. 3, 2014
Resolution: 14.7 Å
EM Method: Single-particle

Lee H, Brendle SA, Bywaters SM, Guan J, Ashley RE, Yoder JD, Makhov AM, Conway JF, Christensen ND, Hafenstein S

J Virol (2015) 89 pp. 1428-1438 [ Pubmed: 25392224 DOI: doi:10.1128/JVI.02898-14 ]

EMD-5991
Download Map
3D View
Electron cryo-microscopy of human papillomavirus 16 and H16.V5 Fab fragments
Release date: Nov. 26, 2014
Resolution: 10.2 Å
EM Method: Single-particle

Lee H, Brendle SA, Bywaters SM, Guan J, Ashley RE, Yoder JD, Makhov AM, Conway JF, Christensen ND, Hafenstein S

J Virol (2015) 89 pp. 1428-1438 [ Pubmed: 25392224 DOI: doi:10.1128/JVI.02898-14 ]

EMD-5992
Download Map
3D View
Electron cryo-microscopy of human papillomavirus 16 and H16.V5 Fab fragments
Release date: Nov. 26, 2014
Resolution: 10.4 Å
EM Method: Single-particle

Lee H, Brendle SA, Bywaters SM, Guan J, Ashley RE, Yoder JD, Makhov AM, Conway JF, Christensen ND, Hafenstein S

J Virol (2015) 89 pp. 1428-1438 [ Pubmed: 25392224 DOI: doi:10.1128/JVI.02898-14 ]

Sort by: Download
Showing 1 - 10 of 12. Page 1 of 2
Display:
Statistics
×

Download











































Preview first 10
Download

Filter By

Current Database

  • EMDB [12]

Current status

  • REL [12]

Sample type

  • Virus [12]
  • Sample [11]
  • Protein [7]

Organism

  • Alphapapillomavirus 9 [12]
  • Mus musculus [6]

EM Method

  • Single-particle [12]

Resolution

  • ≥ 4Å and < 5Å [2]
  • ≥ 8Å and < 12Å [2]
  • ≥ 12Å and < 16Å [7]
  • ≥ 30Å [1]

Model molecular weight

  • > 10 MDa [6]

Release Date

  • 2017 [3]
  • 2015 [3]
  • 2014 [6]

Author by name

  • Ashley RE [11]
  • Brendle SA [11]
  • Bywaters SM [11]
  • Christensen ND [11]
  • Conway JF [11]
  • Guan J [11]
  • Hafenstein S [11]
  • Makhov AM [11]
  • Lee H [9]
  • Yoder JD [6]
  • Ashley R [1]
  • Brendle S [1]
  • Bywaters S [1]
  • Christensen N [1]
  • Gu Y [1]
  • Li S [1]
  • Li SW [1]
  • Li Z [1]
  • Li ZH [1]
  • Pan H [1]
  • Wang D [1]
  • Wei M [1]
  • Wu T [1]
  • Xia N [1]
  • Xie M [1]
  • Yan XD [1]
  • Zhang J [1]
  • Zheng QB [1]

Author by ORCID

  • Ashley RE [11]
  • Conway JF [11]
  • Bywaters SM [11]
  • Lee H [9]
  • Wu T [1]
  • Xia N [1]

Journal

  • J VIROL [6]
  • VIROLOGY [3]
  • STRUCTURE [2]
  • VACCINE [1]

Software

  • AUTO3DEM [11]
  • CHIMERA, SITUS [4]
  • PHENIX, SITUS, NAMD [1]
  • RELION [1]

Microscope

  • JEOL 2100 [6]
  • FEI TECNAI F20 [3]
  • FEI POLARA 300 [2]
  • FEI TECNAI F30 [1]

Electron Source

  • FIELD EMISSION GUN [6]
  • LAB6 [6]

Film or detector model

  • GATAN ULTRASCAN 4000 4K X 4K [6]
  • KODAK SO-163 FILM [3]
  • FEI FALCON II 4K X 4K [2]
  • FEI FALCON I 4K X 4K [1]

External links

  • PDB [6]