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natural_source_ncbi_code:"198628"

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Current Database

  • EMDB [5]

Current status

  • REL [5]

Sample type

  • Complex [5]
  • Protein [5]
  • Ligand [2]

Organism

  • Dickeya dadantii [5]
  • Dickeya dadantii [1]

EM Method

  • Single-particle [5]

Resolution

  • ≥ 2Å and < 3Å [1]
  • ≥ 3Å and < 4Å [2]
  • ≥ 4Å and < 5Å [2]

Model molecular weight

  • 50-100 kDa [1]
  • 100-250 kDa [4]

Release Date

  • 2023 [1]
  • 2021 [2]
  • 2020 [2]

Author by name

  • Cymes GD [4]
  • Grosman C [4]
  • Kumar P [4]
  • Tajkhorshid E [2]
  • Wang Y [2]
  • Zhang Z [2]
  • Zhao Z [2]
  • Carlier A [1]
  • Decossas M [1]
  • Krasteva PV [1]
  • Moreau S [1]
  • Notopoulou A [1]
  • Puygrenier L [1]
  • Sana TG [1]

Author by ORCID

  • Grosman C [4]
  • Kumar P [4]
  • Cymes GD [4]
  • Tajkhorshid E [2]
  • Zhao Z [2]
  • Wang Y [2]
  • Krasteva PV [1]
  • Sana TG [1]
  • Decossas M [1]

Journal

  • PNAS [4]
  • CURR BIOL [1]

Software

  • CRYOSPARC [2]
  • RELION [2]

Microscope

  • FEI TITAN KRIOS [4]
  • FEI TALOS ARCTICA [1]

Electron Source

  • FIELD EMISSION GUN [5]

Film or detector model

  • DIRECT ELECTRON DE-16 4K X 4K [3]
  • GATAN K2 SUMMIT 4K X 4K [2]

External links

  • AlphaFold DB [5]
  • Gene Ontology [5]
  • InterPro [5]
  • PDB [5]
  • PDBe-Kb [5]
  • Pfam [5]
  • UniProt [5]
  • ChEBI [2]
  • ChEMBL [1]
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EMD-17788
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Cryo-EM structure of Dickeya dadantii BcsD
Release date: Dec. 20, 2023
Resolution: 4.0 Å
EM Method: Single-particle
Fitted PDBs: 8poc
Q-score: 0.415

Sana TG, Notopoulou A, Puygrenier L, Decossas M, Moreau S, Carlier A, Krasteva PV

Curr Biol (2024) 34 pp. 106- [ Pubmed: 38141614 DOI: doi:10.1016/j.cub.2023.11.057 ]

EMD-23207
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Structure and function at the lipid-protein interface of a pentameric ligand-gated ion channel
Release date: June 23, 2021
Resolution: 2.5 Å
EM Method: Single-particle
Fitted PDBs: 7l6q
Q-score: 0.554

Kumar P, Cymes GD, Grosman C

PNAS (2021) 118 [ Pubmed: 34083441 DOI: doi:10.1073/pnas.2100164118 ]

EMD-23208
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Unliganded ELIC in POPC-only nanodiscs at 3.3-Angstrom resolution
Release date: June 23, 2021
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 7l6u
Q-score: 0.522

Kumar P, Cymes GD, Grosman C

PNAS (2021) 118 [ Pubmed: 34083441 DOI: doi:10.1073/pnas.2100164118 ]

EMD-20968
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ELIC-propylammonium complex in POPC-only nanodiscs
Release date: Jan. 15, 2020
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 6v03
Q-score: 0.508

Kumar P, Wang Y, Zhang Z, Zhao Z, Cymes GD, Tajkhorshid E, Grosman C

PNAS (2020) 117 pp. 1788-1798 [ DOI: doi:10.1073/pnas.1906823117 Pubmed: 31911476 ]

EMD-20986
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Unliganded ELIC in POPC-only nanodiscs.
Release date: Jan. 15, 2020
Resolution: 4.1 Å
EM Method: Single-particle
Fitted PDBs: 6v0b
Q-score: 0.342

Kumar P, Wang Y, Zhang Z, Zhao Z, Cymes GD, Tajkhorshid E, Grosman C

PNAS (2020) 117 pp. 1788-1798 [ DOI: doi:10.1073/pnas.1906823117 Pubmed: 31911476 ]

Sort by: Download
Showing 1 - 5 of 5. Page 1 of 1
Display:
Statistics
×

Download











































Preview first 10
Download

Filter By

Current Database

  • EMDB [5]

Current status

  • REL [5]

Sample type

  • Complex [5]
  • Protein [5]
  • Ligand [2]

Organism

  • Dickeya dadantii [5]
  • Dickeya dadantii [1]

EM Method

  • Single-particle [5]

Resolution

  • ≥ 2Å and < 3Å [1]
  • ≥ 3Å and < 4Å [2]
  • ≥ 4Å and < 5Å [2]

Model molecular weight

  • 50-100 kDa [1]
  • 100-250 kDa [4]

Release Date

  • 2023 [1]
  • 2021 [2]
  • 2020 [2]

Author by name

  • Cymes GD [4]
  • Grosman C [4]
  • Kumar P [4]
  • Tajkhorshid E [2]
  • Wang Y [2]
  • Zhang Z [2]
  • Zhao Z [2]
  • Carlier A [1]
  • Decossas M [1]
  • Krasteva PV [1]
  • Moreau S [1]
  • Notopoulou A [1]
  • Puygrenier L [1]
  • Sana TG [1]

Author by ORCID

  • Grosman C [4]
  • Kumar P [4]
  • Cymes GD [4]
  • Tajkhorshid E [2]
  • Zhao Z [2]
  • Wang Y [2]
  • Krasteva PV [1]
  • Sana TG [1]
  • Decossas M [1]

Journal

  • PNAS [4]
  • CURR BIOL [1]

Software

  • CRYOSPARC [2]
  • RELION [2]

Microscope

  • FEI TITAN KRIOS [4]
  • FEI TALOS ARCTICA [1]

Electron Source

  • FIELD EMISSION GUN [5]

Film or detector model

  • DIRECT ELECTRON DE-16 4K X 4K [3]
  • GATAN K2 SUMMIT 4K X 4K [2]

External links

  • AlphaFold DB [5]
  • Gene Ontology [5]
  • InterPro [5]
  • PDB [5]
  • PDBe-Kb [5]
  • Pfam [5]
  • UniProt [5]
  • ChEBI [2]
  • ChEMBL [1]