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natural_source_ncbi_code:"1977402"

Filter By

Current Database

  • EMDB [166]

Current status

  • REL [166]

Sample type

  • Complex [166]
  • Protein [7]
  • DNA [6]

Organism

  • Enterobacteria phage m13 [166]
  • Synthetic construct [140]
  • Saccharomyces cerevisiae [3]
  • Listeria innocua [1]

EM Method

  • Tomography [130]
  • Single-particle [35]
  • Subtomogram averaging [1]

Resolution

  • ≥ 2Å and < 3Å [2]
  • ≥ 3Å and < 4Å [9]
  • ≥ 8Å and < 12Å [2]
  • ≥ 12Å and < 16Å [6]
  • ≥ 16Å and < 20Å [12]
  • ≥ 20Å and < 30Å [2]
  • ≥ 30Å [133]

Model molecular weight

  • 100-250 kDa [2]
  • 250-500 kDa [2]
  • 500-1000 kDa [3]
  • 2-5 MDa [1]

Release Date

  • 2025 [3]
  • 2023 [22]
  • 2022 [9]
  • 2021 [1]
  • 2020 [1]
  • 2018 [130]

Author by name

  • Castro C [130]
  • Castro CE [130]
  • Huang C [130]
  • Huang CM [130]
  • Lei D [130]
  • Liu J [130]
  • Marras A [130]
  • Marras AE [130]
  • Ren G [130]
  • Su H [130]
  • Su HJ [130]
  • Zhou L [130]
  • Bathe M [13]
  • Chiu W [13]
  • Li S [13]
  • Zhang K [13]
  • Dietz H [10]
  • Kohler F [10]
  • Asbach B [7]
  • Doye JPK [7]
  • Fowler H [7]
  • Jia Q [7]
  • John T [7]
  • Jun H [7]
  • Monferrer A [7]
  • Peterhoff D [7]
  • Schachtner M [7]
  • Sigl C [7]
  • Wagner R [7]
  • Wang X [7]
  • Xiang Y [7]
  • Ratanalert S [6]
  • Rouskin S [6]
  • Allan MF [4]
  • Bell CE [4]
  • Parsons MF [4]
  • Pullen KM [4]
  • Shepherd TR [4]
  • Feigl E [3]
  • Golestanian R [3]
  • Pumm AK [3]
  • Wheat CT [3]
  • Aksimentiev A [2]
  • Allan M [2]
  • Dekker C [2]
  • Kube M [2]
  • Maffeo C [2]
  • Parsons M [2]
  • Pullen K [2]
  • Pumm A-K [2]
  • Shepherd T [2]
  • Shi X [2]
  • Verschueren D [2]
  • Zhao W [2]
  • Baker LA [1]
  • Bath J [1]
  • Bertosin E [1]
  • Black S [1]
  • Caldwell BJ [1]
  • Engelen W [1]
  • Grunewald K [1]
  • Honemann MN [1]
  • Isensee J [1]
  • Karbowski CF [1]
  • Kopperger E [1]
  • Kozina V [1]
  • Langecker M [1]
  • Machala EA [1]
  • Norris AS [1]
  • Prazak V [1]
  • Pumm A [1]
  • Silvester E [1]
  • Simmel FC [1]
  • Turberfield AJ [1]
  • Vasishtan D [1]
  • Vogt M [1]
  • Vollmer B [1]
  • Whittle C [1]
  • Wiegand AM [1]
  • Wysocki VH [1]

Author by ORCID

  • Zhou L [130]
  • Liu J [130]
  • Castro CE [130]
  • Marras AE [130]
  • Su HJ [130]
  • Ren G [130]
  • Bathe M [11]
  • Li S [11]
  • Chiu W [11]
  • Fowler H [7]
  • John T [7]
  • Doye JPK [7]
  • Wang X [7]
  • Jun H [7]
  • Xiang Y [7]
  • Zhang K [7]
  • Bell CE [4]
  • Ratanalert S [4]
  • Pullen KM [4]
  • Parsons MF [4]
  • Wheat CT [3]
  • Golestanian R [3]
  • Dietz H [3]
  • Pumm AK [3]
  • Dekker C [2]
  • Maffeo C [2]
  • Aksimentiev A [2]
  • Shi X [2]
  • Kohler F [2]
  • Isensee J [1]
  • Honemann MN [1]
  • Prazak V [1]
  • Machala EA [1]
  • Engelen W [1]
  • Bertosin E [1]
  • Karbowski CF [1]
  • Turberfield AJ [1]
  • Grunewald K [1]
  • Vogt M [1]
  • Vollmer B [1]
  • Kopperger E [1]
  • Wysocki VH [1]
  • Simmel FC [1]
  • Black S [1]
  • Wiegand AM [1]

Journal

  • NAT COMMUN [142]
  • CELL REP PHYS SCI [7]
  • SCI ADV [7]
  • TO BE PUBLISHED [6]
  • NAT NANOTECHNOL [2]
  • CELL [1]
  • NATURE [1]

Software

  • TOMOCTF [16]
  • RELION [10]
  • EMAN2 [6]
  • CRYOSPARC [4]
  • IMOD [1]
  • PEET [1]

Microscope

  • ZEISS LIBRA120PLUS [114]
  • FEI TITAN KRIOS [23]
  • FEI TECNAI F20 [16]
  • FEI TECNAI ARCTICA [6]
  • TFS KRIOS [3]
  • FEI TALOS ARCTICA [2]
  • FEI TITAN [2]

Electron Source

  • LAB6 [114]
  • FIELD EMISSION GUN [52]

Film or detector model

  • GATAN ULTRASCAN 4000 4K X 4K [114]
  • GATAN K2 SUMMIT 4K X 4K [22]
  • GATAN K3 6K X 4K [15]
  • FEI FALCON III 4K X 4K [11]
  • FEI FALCON IV 4K X 4K [2]
  • GATAN K3 BIOQUANTUM 6K X 4K [2]

External links

  • PDB [9]
  • Gene Ontology [7]
  • Pfam [7]
  • UniProt [7]
  • AlphaFold DB [4]
  • InterPro [4]
  • PDBe-Kb [4]
  • EMPIAR [2]
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Showing 1 - 10 of 166. Page 1 of 17
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EMD-72979
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3D View
Cryo-EM structure of yeast Mgm101 bound to 83-mer ssDNA
Release date: Nov. 5, 2025
Resolution: 2.54 Å
EM Method: Single-particle
Fitted PDBs: 9yi6
Q-score: 0.427

Wheat CT, Bell CE

To Be Published

EMD-72980
Download Map
3D View
Cryo-EM structure of yeast Mgm101 bound to duplex DNA annealing intermediate
Release date: Nov. 5, 2025
Resolution: 2.54 Å
EM Method: Single-particle
Fitted PDBs: 9yi7
Q-score: 0.519

Wheat CT, Bell CE

To Be Published

EMD-72981
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3D View
Cryo-EM structure of yeast Mgm101 bound to apparent B-form DNA
Release date: Nov. 5, 2025
Resolution: 3.16 Å
EM Method: Single-particle
Fitted PDBs: 9yi8
Q-score: 0.424

Wheat CT, Bell CE

To Be Published

EMD-16236
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3D View
Triangle 1 v1 for DNA ORIGAMI TRAPS FOR LARGE VIRUSES
Release date: Sept. 27, 2023
Resolution: 18.0 Å
EM Method: Single-particle

Monferrer A, Kohler F, Sigl C, Schachtner M, Peterhoff D, Asbach B, Wagner R, Dietz H

Cell Rep Phys Sci (2023) 4 pp. 101237- [ DOI: doi:10.1016/j.xcrp.2022.101237 ]

EMD-16237
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3D View
Triangle-1-version-2 for DNA ORIGAMI TRAPS FOR LARGE VIRUSES
Release date: Sept. 27, 2023
Resolution: 17.0 Å
EM Method: Single-particle

Monferrer A, Kohler F, Sigl C, Schachtner M, Peterhoff D, Asbach B, Wagner R, Dietz H

Cell Rep Phys Sci (2023) 4 pp. 101237- [ DOI: doi:10.1016/j.xcrp.2022.101237 ]

EMD-16238
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3D View
Triangle-1-version-3 for DNA ORIGAMI TRAPS FOR LARGE VIRUSES
Release date: Sept. 27, 2023
Resolution: 16.0 Å
EM Method: Single-particle

Monferrer A, Kohler F, Sigl C, Schachtner M, Peterhoff D, Asbach B, Wagner R, Dietz H

Cell Rep Phys Sci (2023) 4 pp. 101237- [ DOI: doi:10.1016/j.xcrp.2022.101237 ]

EMD-16239
Download Map
3D View
Triangle-2-version-2 for DNA ORIGAMI TRAPS FOR LARGE VIRUSES
Release date: Sept. 27, 2023
Resolution: 16.0 Å
EM Method: Single-particle

Monferrer A, Kohler F, Sigl C, Schachtner M, Peterhoff D, Asbach B, Wagner R, Dietz H

Cell Rep Phys Sci (2023) 4 pp. 101237- [ DOI: doi:10.1016/j.xcrp.2022.101237 ]

EMD-16240
Download Map
3D View
Triangle-2-version-3 for DNA ORIGAMI TRAPS FOR LARGE VIRUSES
Release date: Sept. 27, 2023
Resolution: 17.0 Å
EM Method: Single-particle

Monferrer A, Kohler F, Sigl C, Schachtner M, Peterhoff D, Asbach B, Wagner R, Dietz H

Cell Rep Phys Sci (2023) 4 pp. 101237- [ DOI: doi:10.1016/j.xcrp.2022.101237 ]

EMD-16262
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3D View
9-mer cone assembly for DNA ORIGAMI TRAPS FOR LARGE VIRUSES
Release date: Sept. 27, 2023
Resolution: 43.0 Å
EM Method: Single-particle

Monferrer A, Kohler F, Sigl C, Schachtner M, Peterhoff D, Asbach B, Wagner R, Dietz H

Cell Rep Phys Sci (2023) 4 pp. 101237- [ DOI: doi:10.1016/j.xcrp.2022.101237 ]

EMD-16263
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3D View
10-mer-cone for DNA ORIGAMI TRAPS FOR LARGE VIRUSES
Release date: Sept. 27, 2023
Resolution: 54.0 Å
EM Method: Single-particle

Monferrer A, Kohler F, Sigl C, Schachtner M, Peterhoff D, Asbach B, Wagner R, Dietz H

Cell Rep Phys Sci (2023) 4 pp. 101237- [ DOI: doi:10.1016/j.xcrp.2022.101237 ]

Sort by: Download
Showing 1 - 10 of 166. Page 1 of 17
Display:
Statistics
×

Download











































Preview first 10
Download

Filter By

Current Database

  • EMDB [166]

Current status

  • REL [166]

Sample type

  • Complex [166]
  • Protein [7]
  • DNA [6]

Organism

  • Enterobacteria phage m13 [166]
  • Synthetic construct [140]
  • Saccharomyces cerevisiae [3]
  • Listeria innocua [1]

EM Method

  • Tomography [130]
  • Single-particle [35]
  • Subtomogram averaging [1]

Resolution

  • ≥ 2Å and < 3Å [2]
  • ≥ 3Å and < 4Å [9]
  • ≥ 8Å and < 12Å [2]
  • ≥ 12Å and < 16Å [6]
  • ≥ 16Å and < 20Å [12]
  • ≥ 20Å and < 30Å [2]
  • ≥ 30Å [133]

Model molecular weight

  • 100-250 kDa [2]
  • 250-500 kDa [2]
  • 500-1000 kDa [3]
  • 2-5 MDa [1]

Release Date

  • 2025 [3]
  • 2023 [22]
  • 2022 [9]
  • 2021 [1]
  • 2020 [1]
  • 2018 [130]

Author by name

  • Castro C [130]
  • Castro CE [130]
  • Huang C [130]
  • Huang CM [130]
  • Lei D [130]
  • Liu J [130]
  • Marras A [130]
  • Marras AE [130]
  • Ren G [130]
  • Su H [130]
  • Su HJ [130]
  • Zhou L [130]
  • Bathe M [13]
  • Chiu W [13]
  • Li S [13]
  • Zhang K [13]
  • Dietz H [10]
  • Kohler F [10]
  • Asbach B [7]
  • Doye JPK [7]
  • Fowler H [7]
  • Jia Q [7]
  • John T [7]
  • Jun H [7]
  • Monferrer A [7]
  • Peterhoff D [7]
  • Schachtner M [7]
  • Sigl C [7]
  • Wagner R [7]
  • Wang X [7]
  • Xiang Y [7]
  • Ratanalert S [6]
  • Rouskin S [6]
  • Allan MF [4]
  • Bell CE [4]
  • Parsons MF [4]
  • Pullen KM [4]
  • Shepherd TR [4]
  • Feigl E [3]
  • Golestanian R [3]
  • Pumm AK [3]
  • Wheat CT [3]
  • Aksimentiev A [2]
  • Allan M [2]
  • Dekker C [2]
  • Kube M [2]
  • Maffeo C [2]
  • Parsons M [2]
  • Pullen K [2]
  • Pumm A-K [2]
  • Shepherd T [2]
  • Shi X [2]
  • Verschueren D [2]
  • Zhao W [2]
  • Baker LA [1]
  • Bath J [1]
  • Bertosin E [1]
  • Black S [1]
  • Caldwell BJ [1]
  • Engelen W [1]
  • Grunewald K [1]
  • Honemann MN [1]
  • Isensee J [1]
  • Karbowski CF [1]
  • Kopperger E [1]
  • Kozina V [1]
  • Langecker M [1]
  • Machala EA [1]
  • Norris AS [1]
  • Prazak V [1]
  • Pumm A [1]
  • Silvester E [1]
  • Simmel FC [1]
  • Turberfield AJ [1]
  • Vasishtan D [1]
  • Vogt M [1]
  • Vollmer B [1]
  • Whittle C [1]
  • Wiegand AM [1]
  • Wysocki VH [1]

Author by ORCID

  • Zhou L [130]
  • Liu J [130]
  • Castro CE [130]
  • Marras AE [130]
  • Su HJ [130]
  • Ren G [130]
  • Bathe M [11]
  • Li S [11]
  • Chiu W [11]
  • Fowler H [7]
  • John T [7]
  • Doye JPK [7]
  • Wang X [7]
  • Jun H [7]
  • Xiang Y [7]
  • Zhang K [7]
  • Bell CE [4]
  • Ratanalert S [4]
  • Pullen KM [4]
  • Parsons MF [4]
  • Wheat CT [3]
  • Golestanian R [3]
  • Dietz H [3]
  • Pumm AK [3]
  • Dekker C [2]
  • Maffeo C [2]
  • Aksimentiev A [2]
  • Shi X [2]
  • Kohler F [2]
  • Isensee J [1]
  • Honemann MN [1]
  • Prazak V [1]
  • Machala EA [1]
  • Engelen W [1]
  • Bertosin E [1]
  • Karbowski CF [1]
  • Turberfield AJ [1]
  • Grunewald K [1]
  • Vogt M [1]
  • Vollmer B [1]
  • Kopperger E [1]
  • Wysocki VH [1]
  • Simmel FC [1]
  • Black S [1]
  • Wiegand AM [1]

Journal

  • NAT COMMUN [142]
  • CELL REP PHYS SCI [7]
  • SCI ADV [7]
  • TO BE PUBLISHED [6]
  • NAT NANOTECHNOL [2]
  • CELL [1]
  • NATURE [1]

Software

  • TOMOCTF [16]
  • RELION [10]
  • EMAN2 [6]
  • CRYOSPARC [4]
  • IMOD [1]
  • PEET [1]

Microscope

  • ZEISS LIBRA120PLUS [114]
  • FEI TITAN KRIOS [23]
  • FEI TECNAI F20 [16]
  • FEI TECNAI ARCTICA [6]
  • TFS KRIOS [3]
  • FEI TALOS ARCTICA [2]
  • FEI TITAN [2]

Electron Source

  • LAB6 [114]
  • FIELD EMISSION GUN [52]

Film or detector model

  • GATAN ULTRASCAN 4000 4K X 4K [114]
  • GATAN K2 SUMMIT 4K X 4K [22]
  • GATAN K3 6K X 4K [15]
  • FEI FALCON III 4K X 4K [11]
  • FEI FALCON IV 4K X 4K [2]
  • GATAN K3 BIOQUANTUM 6K X 4K [2]

External links

  • PDB [9]
  • Gene Ontology [7]
  • Pfam [7]
  • UniProt [7]
  • AlphaFold DB [4]
  • InterPro [4]
  • PDBe-Kb [4]
  • EMPIAR [2]