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natural_source_ncbi_code:"194439"

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Current Database

  • EMDB [6]

Current status

  • REL [6]

Sample type

  • Ligand [6]
  • Protein [6]
  • Complex [5]
  • Cellular component [1]

Organism

  • Chlorobaculum tepidum [6]
  • Chlorobaculum tepidum [1]

EM Method

  • Single-particle [6]

Resolution

  • ≥ 2Å and < 3Å [3]
  • ≥ 3Å and < 4Å [2]
  • ≥ 20Å and < 30Å [1]

Model molecular weight

  • 50-100 kDa [1]
  • 250-500 kDa [2]
  • 500-1000 kDa [3]

Release Date

  • 2023 [1]
  • 2022 [3]
  • 2020 [1]
  • 2016 [1]

Author by name

  • Chan KY [2]
  • Chen JH [2]
  • Cheng K-W [2]
  • Cheng KW [2]
  • Chiu P-L [2]
  • Chiu PL [2]
  • Chou T-F [2]
  • Chou TF [2]
  • Chowdhury S [2]
  • Du Truong C [2]
  • Kuang T [2]
  • Li S [2]
  • Liu H [2]
  • Mazor Y [2]
  • Nannenga B [2]
  • Nannenga BL [2]
  • Poh Y-P [2]
  • Poh YP [2]
  • Puskar R [2]
  • Shen JR [2]
  • Swain K [2]
  • Truong CD [2]
  • Wang TY [2]
  • Wang W [2]
  • Zhang X [2]
  • Bjerring M [1]
  • Chang S [1]
  • Dorogi M [1]
  • Frigaard NU [1]
  • Garab G [1]
  • Han G [1]
  • Huang Z [1]
  • Jegerschold C [1]
  • Khera R [1]
  • Koutantou M [1]
  • Kulminskaya NV [1]
  • Lambrev PH [1]
  • Lindahl M [1]
  • Linnanto JM [1]
  • Liu XC [1]
  • Lyratzakis A [1]
  • Michel H [1]
  • Nielsen JT [1]
  • Nielsen NC [1]
  • Pedersen MO [1]
  • Ratsep M [1]
  • Thomsen K [1]
  • Tsiotis G [1]
  • Wang C [1]
  • Welsch S [1]
  • Wu H [1]
  • Xie H [1]
  • Xu C [1]

Author by ORCID

  • Mazor Y [2]
  • Nannenga BL [2]
  • Chiu PL [2]
  • Cheng KW [2]
  • Liu H [2]
  • Chou TF [2]
  • Shen JR [2]
  • Lambrev PH [1]
  • Linnanto JM [1]
  • Chang S [1]
  • Xu C [1]
  • Wang W [1]
  • Kuang T [1]
  • Kulminskaya NV [1]
  • Xie H [1]
  • Khera R [1]
  • Welsch S [1]
  • Zhang X [1]
  • Frigaard NU [1]
  • Jegerschold C [1]
  • Han G [1]
  • Chen JH [1]
  • Michel H [1]

Journal

  • NAT COMMUN [3]
  • ANGEW CHEM INT ED ENGL [1]
  • J INTEGR PLANT BIOL [1]
  • PNAS [1]
  • SCIENCE [1]

Software

  • CRYOSPARC [5]
  • CTFFIND [1]
  • EMAN [1]
  • STRUL [1]

Microscope

  • FEI TITAN KRIOS [6]

Electron Source

  • FIELD EMISSION GUN [6]

Film or detector model

  • GATAN K2 SUMMIT 4K X 4K [3]
  • FEI FALCON IV 4K X 4K [1]
  • GATAN K3 6K X 4K [1]
  • GATAN ULTRASCAN 4000 4K X 4K [1]

External links

  • AlphaFold DB [6]
  • ChEBI [6]
  • DrugBank [6]
  • InterPro [6]
  • PDB [6]
  • PDBe-Kb [6]
  • Pfam [6]
  • UniProt [6]
  • Gene Ontology [5]
  • ChEMBL [1]
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Showing 1 - 6 of 6. Page 1 of 1
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EMD-14528
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3D View
Cryo-EM structure of the whole photosynthetic complex from the green sulfur bacteria
Release date: Feb. 8, 2023
Resolution: 2.5 Å
EM Method: Single-particle
Fitted PDBs: 7z6q
Q-score: 0.493

Xie H, Lyratzakis A, Khera R, Koutantou M, Welsch S, Michel H, Tsiotis G

PNAS (2023) 120 pp. e2216734120-e2216734120 [ Pubmed: 36693097 DOI: doi:10.1073/pnas.2216734120 ]

EMD-34307
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3D View
Structure of the intact photosynthetic light-harvesting antenna-reaction center complex from a green sulfur bacterium
Release date: Nov. 23, 2022
Resolution: 2.9 Å
EM Method: Single-particle
Fitted PDBs: 8gwa
Q-score: 0.541

Chen JH, Wang W, Wang C, Kuang T, Shen JR, Zhang X

J Integr Plant Biol (2023) 65 pp. 223-234 [ Pubmed: 36125941 DOI: doi:10.1111/jipb.13367 ]

EMD-26469
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3D View
Photosynthetic assembly of Chlorobaculum tepidum RC-FMO1
Release date: Oct. 5, 2022
Resolution: 3.49 Å
EM Method: Single-particle
Fitted PDBs: 7uea
Q-score: 0.406

Puskar R, Du Truong C, Swain K, Chowdhury S, Chan KY, Li S, Cheng KW, Wang TY, Poh YP, Mazor Y, Liu H, Chou TF, Nannenga BL, Chiu PL

Nat Commun (2022) 13 pp. 5824-5824 [ Pubmed: 36192412 DOI: doi:10.1038/s41467-022-33505-4 ]

EMD-26471
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3D View
Photosynthetic assembly of Chlorobaculum tepidum RC-FMO2
Release date: Oct. 5, 2022
Resolution: 3.08 Å
EM Method: Single-particle
Fitted PDBs: 7ueb
Q-score: 0.497

Puskar R, Du Truong C, Swain K, Chowdhury S, Chan KY, Li S, Cheng KW, Wang TY, Poh YP, Mazor Y, Liu H, Chou TF, Nannenga BL, Chiu PL

Nat Commun (2022) 13 pp. 5824-5824 [ Pubmed: 36192412 DOI: doi:10.1038/s41467-022-33505-4 ]

EMD-30069
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3D View
Cryo-EM structure of FMO-RC complex from green sulfur bacteria
Release date: Nov. 25, 2020
Resolution: 2.7 Å
EM Method: Single-particle
Fitted PDBs: 6m32
Q-score: 0.525

Chen JH, Wu H, Xu C, Liu XC, Huang Z, Chang S, Wang W, Han G, Kuang T, Shen JR, Zhang X

Science (2020) 370 [ Pubmed: 33214250 DOI: doi:10.1126/science.abb6350 ]

EMD-4033
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In situ atomic-resolution structure of the baseplate antenna complex in Chlorobaculum tepidum obtained combining solid-state NMR spectroscopy, cryo electron microscopy and polarization spectroscopy
Release date: July 27, 2016
Resolution: 26.5 Å
EM Method: Single-particle
Fitted PDBs: 5lcb
Q-score: -0.012

Nielsen JT, Kulminskaya NV, Bjerring M, Linnanto JM, Ratsep M, Pedersen MO, Lambrev PH, Dorogi M, Garab G, Thomsen K, Jegerschold C, Frigaard NU, Lindahl M, Nielsen NC

Nat Commun (2016) 7 pp. 12454-12454 [ DOI: doi:10.1038/ncomms12454 Pubmed: 27534696 ]

Sort by: Download
Showing 1 - 6 of 6. Page 1 of 1
Display:
Statistics
×

Download











































Preview first 10
Download

Filter By

Current Database

  • EMDB [6]

Current status

  • REL [6]

Sample type

  • Ligand [6]
  • Protein [6]
  • Complex [5]
  • Cellular component [1]

Organism

  • Chlorobaculum tepidum [6]
  • Chlorobaculum tepidum [1]

EM Method

  • Single-particle [6]

Resolution

  • ≥ 2Å and < 3Å [3]
  • ≥ 3Å and < 4Å [2]
  • ≥ 20Å and < 30Å [1]

Model molecular weight

  • 50-100 kDa [1]
  • 250-500 kDa [2]
  • 500-1000 kDa [3]

Release Date

  • 2023 [1]
  • 2022 [3]
  • 2020 [1]
  • 2016 [1]

Author by name

  • Chan KY [2]
  • Chen JH [2]
  • Cheng K-W [2]
  • Cheng KW [2]
  • Chiu P-L [2]
  • Chiu PL [2]
  • Chou T-F [2]
  • Chou TF [2]
  • Chowdhury S [2]
  • Du Truong C [2]
  • Kuang T [2]
  • Li S [2]
  • Liu H [2]
  • Mazor Y [2]
  • Nannenga B [2]
  • Nannenga BL [2]
  • Poh Y-P [2]
  • Poh YP [2]
  • Puskar R [2]
  • Shen JR [2]
  • Swain K [2]
  • Truong CD [2]
  • Wang TY [2]
  • Wang W [2]
  • Zhang X [2]
  • Bjerring M [1]
  • Chang S [1]
  • Dorogi M [1]
  • Frigaard NU [1]
  • Garab G [1]
  • Han G [1]
  • Huang Z [1]
  • Jegerschold C [1]
  • Khera R [1]
  • Koutantou M [1]
  • Kulminskaya NV [1]
  • Lambrev PH [1]
  • Lindahl M [1]
  • Linnanto JM [1]
  • Liu XC [1]
  • Lyratzakis A [1]
  • Michel H [1]
  • Nielsen JT [1]
  • Nielsen NC [1]
  • Pedersen MO [1]
  • Ratsep M [1]
  • Thomsen K [1]
  • Tsiotis G [1]
  • Wang C [1]
  • Welsch S [1]
  • Wu H [1]
  • Xie H [1]
  • Xu C [1]

Author by ORCID

  • Mazor Y [2]
  • Nannenga BL [2]
  • Chiu PL [2]
  • Cheng KW [2]
  • Liu H [2]
  • Chou TF [2]
  • Shen JR [2]
  • Lambrev PH [1]
  • Linnanto JM [1]
  • Chang S [1]
  • Xu C [1]
  • Wang W [1]
  • Kuang T [1]
  • Kulminskaya NV [1]
  • Xie H [1]
  • Khera R [1]
  • Welsch S [1]
  • Zhang X [1]
  • Frigaard NU [1]
  • Jegerschold C [1]
  • Han G [1]
  • Chen JH [1]
  • Michel H [1]

Journal

  • NAT COMMUN [3]
  • ANGEW CHEM INT ED ENGL [1]
  • J INTEGR PLANT BIOL [1]
  • PNAS [1]
  • SCIENCE [1]

Software

  • CRYOSPARC [5]
  • CTFFIND [1]
  • EMAN [1]
  • STRUL [1]

Microscope

  • FEI TITAN KRIOS [6]

Electron Source

  • FIELD EMISSION GUN [6]

Film or detector model

  • GATAN K2 SUMMIT 4K X 4K [3]
  • FEI FALCON IV 4K X 4K [1]
  • GATAN K3 6K X 4K [1]
  • GATAN ULTRASCAN 4000 4K X 4K [1]

External links

  • AlphaFold DB [6]
  • ChEBI [6]
  • DrugBank [6]
  • InterPro [6]
  • PDB [6]
  • PDBe-Kb [6]
  • Pfam [6]
  • UniProt [6]
  • Gene Ontology [5]
  • ChEMBL [1]