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natural_source_ncbi_code:"1904864"

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Current Database

  • EMDB [2]

Current status

  • REL [2]

Sample type

  • Complex [2]
  • Protein [2]
  • DNA [1]
  • Ligand [1]
  • RNA [1]

Organism

  • Bacillales bacterium [2]

EM Method

  • Single-particle [2]

Resolution

  • ≥ 2Å and < 3Å [1]
  • ≥ 3Å and < 4Å [1]

Model molecular weight

  • 100-250 kDa [1]
  • 500-1000 kDa [1]

Release Date

  • 2024 [2]

Author by name

  • Finocchio G [2]
  • Heijstek C [2]
  • Jinek M [2]
  • Koopal B [2]
  • Potocnik A [2]
  • Swarts D [2]
  • Swarts DC [2]
  • Westphal AH [2]

Author by ORCID

  • Finocchio G [2]
  • Potocnik A [2]
  • Koopal B [2]
  • Jinek M [2]
  • Swarts DC [2]

Journal

  • NUCLEIC ACIDS RES [2]

Microscope

  • FEI TITAN KRIOS [2]

Electron Source

  • FIELD EMISSION GUN [2]

Film or detector model

  • GATAN K3 6K X 4K [2]

External links

  • AlphaFold DB [2]
  • Gene Ontology [2]
  • InterPro [2]
  • PDB [2]
  • PDBe-Kb [2]
  • UniProt [2]
  • ChEBI [1]
  • DrugBank [1]
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EMD-18486
Download Map
3D View
CryoEM structure of the apo SPARTA BabAgo/TIR-APAZ complex
Release date: Jan. 31, 2024
Resolution: 2.57 Å
EM Method: Single-particle
Fitted PDBs: 8qlo
Q-score: 0.505

Finocchio G, Koopal B, Potocnik A, Heijstek C, Westphal AH, Jinek M, Swarts DC

Nucleic Acids Res (2024) 52 pp. 2012-2029 [ DOI: doi:10.1093/nar/gkad1248 Pubmed: 38224450 ]

EMD-18487
Download Map
3D View
CryoEM structure of the RNA/DNA bound SPARTA BabAgo/TIR-APAZ tetrameric complex
Release date: Jan. 31, 2024
Resolution: 3.14 Å
EM Method: Single-particle
Fitted PDBs: 8qlp
Q-score: 0.391

Finocchio G, Koopal B, Potocnik A, Heijstek C, Westphal AH, Jinek M, Swarts DC

Nucleic Acids Res (2024) 52 pp. 2012-2029 [ DOI: doi:10.1093/nar/gkad1248 Pubmed: 38224450 ]

Sort by: Download
Showing 1 - 2 of 2. Page 1 of 1
Display:
Statistics
×

Download











































Preview first 10
Download

Filter By

Current Database

  • EMDB [2]

Current status

  • REL [2]

Sample type

  • Complex [2]
  • Protein [2]
  • DNA [1]
  • Ligand [1]
  • RNA [1]

Organism

  • Bacillales bacterium [2]

EM Method

  • Single-particle [2]

Resolution

  • ≥ 2Å and < 3Å [1]
  • ≥ 3Å and < 4Å [1]

Model molecular weight

  • 100-250 kDa [1]
  • 500-1000 kDa [1]

Release Date

  • 2024 [2]

Author by name

  • Finocchio G [2]
  • Heijstek C [2]
  • Jinek M [2]
  • Koopal B [2]
  • Potocnik A [2]
  • Swarts D [2]
  • Swarts DC [2]
  • Westphal AH [2]

Author by ORCID

  • Finocchio G [2]
  • Potocnik A [2]
  • Koopal B [2]
  • Jinek M [2]
  • Swarts DC [2]

Journal

  • NUCLEIC ACIDS RES [2]

Microscope

  • FEI TITAN KRIOS [2]

Electron Source

  • FIELD EMISSION GUN [2]

Film or detector model

  • GATAN K3 6K X 4K [2]

External links

  • AlphaFold DB [2]
  • Gene Ontology [2]
  • InterPro [2]
  • PDB [2]
  • PDBe-Kb [2]
  • UniProt [2]
  • ChEBI [1]
  • DrugBank [1]