Happy Holidays and New year from the EMDB! Please be advised that the EMDB team will be operating at reduced capacity between December 15th - January 12th. With this in mind we would ask that you be prepared for longer reply times through both our helpdesk system and the OneDep deposition system. well done on a productive 2025, wishing you all the best and we will see you in 2026!

Edit your search query here and hit Return to execute it:
natural_source_ncbi_code:"1805492"

Filter By

Current Database

  • EMDB [2]

Current status

  • REL [2]

Sample type

  • Complex [2]
  • DNA [2]
  • Protein [2]
  • Ligand [1]

Organism

  • Pyrobaculum filamentous virus 1 [2]
  • Simian foamy virus [1]
  • Homo sapiens [1]

EM Method

  • Helical reconstruction [1]
  • Single-particle [1]

Resolution

  • ≥ 3Å and < 4Å [2]

Model molecular weight

  • 250-500 kDa [1]
  • 500-1000 kDa [1]

Release Date

  • 2020 [1]
  • 2019 [1]

Author by name

  • Baquero DP [1]
  • Cherepanov P [1]
  • Costa A [1]
  • Egelman EH [1]
  • Ghoneim M [1]
  • Krupovic M [1]
  • Maskell DP [1]
  • Nans A [1]
  • Osinski T [1]
  • Prangishvili D [1]
  • Pye VE [1]
  • Renault L [1]
  • Rueda DS [1]
  • Su Z [1]
  • Wang F [1]
  • Wilson MD [1]

Author by ORCID

  • Renault L [1]
  • Su Z [1]
  • Wilson MD [1]
  • Pye VE [1]
  • Osinski T [1]
  • Cherepanov P [1]
  • Wang F [1]
  • Costa A [1]
  • Ghoneim M [1]
  • Maskell DP [1]
  • Rueda DS [1]
  • Egelman EH [1]

Journal

  • NAT COMMUN [1]
  • VIRUS EVOL [1]

Software

  • RELION [2]
  • SPIDER [1]

Microscope

  • FEI TITAN KRIOS [2]

Electron Source

  • FIELD EMISSION GUN [2]

Film or detector model

  • FEI FALCON II 4K X 4K [1]
  • FEI FALCON III 4K X 4K [1]

External links

  • Gene Ontology [2]
  • PDB [2]
  • UniProt [2]
  • AlphaFold DB [1]
  • ChEBI [1]
  • DrugBank [1]
  • InterPro [1]
  • PDBe-Kb [1]
  • Pfam [1]
  • SCOP2 [1]
Sort by: Download
Showing 1 - 2 of 2. Page 1 of 1
Display:
Statistics
×

Download











































Preview first 10
Download
EMD-21094
Download Map
3D View
Cryo-EM reconstruction of Pyrobaculum filamentous virus 2 PFV2
Release date: April 1, 2020
Resolution: 3.4 Å
EM Method: Helical reconstruction
Fitted PDBs: 6v7b
Q-score: 0.538

Wang F, Baquero DP, Su Z, Osinski T, Prangishvili D, Egelman EH, Krupovic M

Virus Evol (2020) 6 pp. veaa023-veaa023 [ Pubmed: 32368353 DOI: doi:10.1093/ve/veaa023 ]

EMD-4960
Download Map
3D View
PFV intasome - nucleosome strand transfer complex
Release date: Sept. 25, 2019
Resolution: 3.9 Å
EM Method: Single-particle
Fitted PDBs: 6rny
Q-score: 0.349

Wilson MD, Renault L, Maskell DP, Ghoneim M, Pye VE, Nans A, Rueda DS, Cherepanov P, Costa A

Nat Commun (2019) 10 pp. 4189-4189 [ DOI: doi:10.1038/s41467-019-12007-w Pubmed: 31519882 ]

Sort by: Download
Showing 1 - 2 of 2. Page 1 of 1
Display:
Statistics
×

Download











































Preview first 10
Download

Filter By

Current Database

  • EMDB [2]

Current status

  • REL [2]

Sample type

  • Complex [2]
  • DNA [2]
  • Protein [2]
  • Ligand [1]

Organism

  • Pyrobaculum filamentous virus 1 [2]
  • Simian foamy virus [1]
  • Homo sapiens [1]

EM Method

  • Helical reconstruction [1]
  • Single-particle [1]

Resolution

  • ≥ 3Å and < 4Å [2]

Model molecular weight

  • 250-500 kDa [1]
  • 500-1000 kDa [1]

Release Date

  • 2020 [1]
  • 2019 [1]

Author by name

  • Baquero DP [1]
  • Cherepanov P [1]
  • Costa A [1]
  • Egelman EH [1]
  • Ghoneim M [1]
  • Krupovic M [1]
  • Maskell DP [1]
  • Nans A [1]
  • Osinski T [1]
  • Prangishvili D [1]
  • Pye VE [1]
  • Renault L [1]
  • Rueda DS [1]
  • Su Z [1]
  • Wang F [1]
  • Wilson MD [1]

Author by ORCID

  • Renault L [1]
  • Su Z [1]
  • Wilson MD [1]
  • Pye VE [1]
  • Osinski T [1]
  • Cherepanov P [1]
  • Wang F [1]
  • Costa A [1]
  • Ghoneim M [1]
  • Maskell DP [1]
  • Rueda DS [1]
  • Egelman EH [1]

Journal

  • NAT COMMUN [1]
  • VIRUS EVOL [1]

Software

  • RELION [2]
  • SPIDER [1]

Microscope

  • FEI TITAN KRIOS [2]

Electron Source

  • FIELD EMISSION GUN [2]

Film or detector model

  • FEI FALCON II 4K X 4K [1]
  • FEI FALCON III 4K X 4K [1]

External links

  • Gene Ontology [2]
  • PDB [2]
  • UniProt [2]
  • AlphaFold DB [1]
  • ChEBI [1]
  • DrugBank [1]
  • InterPro [1]
  • PDBe-Kb [1]
  • Pfam [1]
  • SCOP2 [1]