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natural_source_ncbi_code:"1639"

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Current Database

  • EMDB [23]

Current status

  • REL [23]

Sample type

  • Complex [16]
  • Protein [16]
  • Ligand [12]
  • Cell [6]
  • RNA [2]
  • Sample [1]

Organism

  • Listeria monocytogenes [23]
  • Listeria monocytogenes [3]
  • Pediococcus acidilactici [2]
  • Lactococcus garvieae [1]
  • Latilactobacillus sakei [1]

EM Method

  • Single-particle [17]
  • Tomography [6]

Resolution

  • ≥ 2Å and < 3Å [10]
  • ≥ 3Å and < 4Å [6]
  • ≥ 12Å and < 16Å [1]

Model molecular weight

  • 50-100 kDa [3]
  • 100-250 kDa [4]
  • 250-500 kDa [2]
  • 500-1000 kDa [2]
  • 1-2 MDa [3]

Release Date

  • 2025 [6]
  • 2024 [1]
  • 2023 [7]
  • 2022 [5]
  • 2021 [2]
  • 2019 [1]
  • 2011 [1]

Author by name

  • Wang JW [7]
  • Burkolter M [6]
  • Feldmueller M [6]
  • Feldmuller M [6]
  • Kilcher S [6]
  • Loessner M [6]
  • Loessner MJ [6]
  • Meile S [6]
  • Pilhofer M [6]
  • Schneller A [6]
  • Schuppler M [6]
  • Wang J [6]
  • Wohlfarth JC [6]
  • Atkinson GC [3]
  • Bulvas O [3]
  • Crowe-mcauliffe C [3]
  • Ge X [3]
  • Gu Z [3]
  • Gu ZW [3]
  • Hauryliuk V [3]
  • Johansson J [3]
  • Julius C [3]
  • Koller TO [3]
  • Kurata T [3]
  • Nakamoto JA [3]
  • Roghanian M [3]
  • Turnbull KJ [3]
  • Vaitkevicius K [3]
  • Wilson DN [3]
  • Zeng J [3]
  • Zhu L [3]
  • Andersson M [2]
  • Borgnia MJ [2]
  • Brennan RG [2]
  • Dopkins B [2]
  • Lent N [2]
  • Levantino M [2]
  • Magkakis K [2]
  • Nguyen VD [2]
  • Oradd F [2]
  • Peck J [2]
  • Peck JV [2]
  • Pounot K [2]
  • Prabudiansyah I [2]
  • Salinas R [2]
  • Schumacher MA [2]
  • Travis BA [2]
  • Wang C [2]
  • Basse Hansen S [1]
  • Boettcher T [1]
  • Braun N [1]
  • Cossart P [1]
  • Costa TRD [1]
  • Flygaard RF [1]
  • Flygaard RK [1]
  • Hansen SB [1]
  • Kastenmueller A [1]
  • Kjaergaard M [1]
  • Nissen P [1]
  • Redzej A [1]
  • Rifflet A [1]
  • Rolhion N [1]
  • Sieber S [1]
  • Waksman G [1]
  • Weinkauf S [1]
  • Williams AH [1]
  • Zeiler E [1]
  • Zeng JW [1]
  • Zhu LY [1]

Author by ORCID

  • Meile S [6]
  • Wang J [6]
  • Burkolter M [6]
  • Kilcher S [6]
  • Feldmuller M [6]
  • Pilhofer M [6]
  • Loessner MJ [6]
  • Turnbull KJ [3]
  • Johansson J [3]
  • Julius C [3]
  • Atkinson GC [3]
  • Zeng J [3]
  • Koller TO [3]
  • Crowe-mcauliffe C [3]
  • Hauryliuk V [3]
  • Wilson DN [3]
  • Bulvas O [3]
  • Ge X [3]
  • Zhu L [3]
  • Gu Z [3]
  • Prabudiansyah I [2]
  • Brennan RG [2]
  • Salinas R [2]
  • Borgnia MJ [2]
  • Oradd F [2]
  • Levantino M [2]
  • Andersson M [2]
  • Schumacher MA [2]
  • Pounot K [2]
  • Magkakis K [2]
  • Wang JW [1]
  • Rolhion N [1]
  • Flygaard RK [1]
  • Kjaergaard M [1]
  • Boettcher T [1]
  • Nissen P [1]
  • Redzej A [1]
  • Costa TRD [1]
  • Basse Hansen S [1]

Journal

  • NAT COMMUN [6]
  • NAT MICROBIOL [6]
  • APPL ENVIRON MICROBIOL [3]
  • NUCLEIC ACIDS RES [3]
  • SCI ADV [2]
  • ANGEW CHEM INT ED ENGL [1]
  • EMBO REP [1]
  • TO BE PUBLISHED [1]

Software

  • RELION [4]
  • CRYOSPARC [3]
  • CTFFIND [1]
  • IMAGIC [1]

Microscope

  • FEI TITAN KRIOS [18]
  • FEI TALOS ARCTICA [2]
  • FEI TECNAI F30 [1]
  • JEOL 100CX [1]
  • TFS KRIOS [1]

Electron Source

  • FIELD EMISSION GUN [20]
  • LAB6 [1]
  • OTHER [1]
  • TUNGSTEN HAIRPIN [1]

Film or detector model

  • GATAN K2 SUMMIT 4K X 4K [9]
  • GATAN K3 6K X 4K [5]
  • GATAN K3 BIOQUANTUM 6K X 4K [5]
  • FEI FALCON IV 4K X 4K [2]
  • GATAN K2 QUANTUM 4K X 4K [1]

External links

  • AlphaFold DB [14]
  • PDB [14]
  • PDBe-Kb [14]
  • UniProt [14]
  • Pfam [13]
  • ChEBI [12]
  • InterPro [12]
  • Gene Ontology [10]
  • DrugBank [9]
  • ChEMBL [7]
  • EMPIAR [3]
Sort by: Download
Showing 1 - 10 of 23. Page 1 of 3
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EMD-66032
Download Map
3D View
Cryo-EM structure of the GarQ-lmYZ complex
Release date: Nov. 12, 2025
Resolution: 2.96 Å
EM Method: Single-particle
Fitted PDBs: 9wjw
Q-score: 0.545

Wang JW

To Be Published

EMD-19980
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3D View
CryoEM structure of LMCA1 in E2P state
Release date: Feb. 5, 2025
Resolution: 2.98 Å
EM Method: Single-particle
Fitted PDBs: 9euq
Q-score: 0.481

Prabudiansyah I, Oradd F, Magkakis K, Pounot K, Levantino M, Andersson M

Sci Adv (2024) 10 pp. eadp2916-eadp2916 [ Pubmed: 39908574 DOI: doi:10.1126/sciadv.adp2916 ]

EMD-19998
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3D View
CryoEM structure of LMCA1 in E1-Ca state
Release date: Feb. 5, 2025
Resolution: 3.73 Å
EM Method: Single-particle
Fitted PDBs: 9evc
Q-score: 0.309

Prabudiansyah I, Oradd F, Magkakis K, Pounot K, Levantino M, Andersson M

Sci Adv (2024) 10 pp. eadp2916-eadp2916 [ Pubmed: 39908574 DOI: doi:10.1126/sciadv.adp2916 ]

EMD-61073
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3D View
Cap region of monocin
Release date: Jan. 8, 2025
Resolution: 3.42 Å
EM Method: Single-particle
Fitted PDBs: 9j1j
Q-score: 0.441

Gu Z, Ge X, Wang J

Nat Commun (2025) 16 pp. 1695-1695 [ DOI: doi:10.1038/s41467-025-57075-3 Pubmed: 39956822 ]

EMD-61074
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3D View
Tip region of monocin
Release date: Jan. 8, 2025
Resolution: 2.88 Å
EM Method: Single-particle
Fitted PDBs: 9j1k
Q-score: 0.515

Gu Z, Ge X, Wang J

Nat Commun (2025) 16 pp. 1695-1695 [ DOI: doi:10.1038/s41467-025-57075-3 Pubmed: 39956822 ]

EMD-61075
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3D View
Side fiber of monocin
Release date: Jan. 8, 2025
Resolution: 3.28 Å
EM Method: Single-particle
Fitted PDBs: 9j1l
Q-score: 0.347

Gu Z, Ge X, Wang J

Nat Commun (2025) 16 pp. 1695-1695 [ DOI: doi:10.1038/s41467-025-57075-3 Pubmed: 39956822 ]

EMD-51510
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Structure of a Ca2 bound phosphoenzyme intermediate in the inward-to-outward transition of Ca2 -ATPase 1 from Listeria monocytogenes
Release date: Oct. 16, 2024
Resolution: 3.46 Å
EM Method: Single-particle
Fitted PDBs: 9gqo
Q-score: 0.331

Basse Hansen S, Flygaard RK, Kjaergaard M, Nissen P

EMBO Rep (2025) 26 pp. 1709-1723 [ Pubmed: 40016426 DOI: doi:10.1038/s44319-025-00392-x ]

EMD-33448
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Cryo-EM structure of Listeria monocytogenes man-PTS complexed with pediocin PA-1
Release date: June 7, 2023
Resolution: 2.2 Å
EM Method: Single-particle
Fitted PDBs: 7xtg
Q-score: 0.533

Zhu L, Zeng J, Wang J

Appl Environ Microbiol (2022) 88 pp. e0048122-e0048122 [ DOI: doi:10.1128/aem.00481-22 Pubmed: 35703550 ]

EMD-16284
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3D View
Cryotomogram of L-form-like cytoplasmic membrane vesicles of Listeria monocytogenes Rev2 cell
Release date: Feb. 8, 2023
EM Method: Tomography

Wohlfarth JC, Feldmuller M, Schneller A, Kilcher S, Burkolter M, Meile S, Pilhofer M, Schuppler M, Loessner MJ

Nat Microbiol (2023) 8 pp. 387-399 [ DOI: doi:10.1038/s41564-022-01317-3 Pubmed: 36717719 ]

EMD-16285
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3D View
Cryotomogram of endolysin Ply006 treated Listeria monocytogenes Rev2 cell stage 1
Release date: Feb. 8, 2023
EM Method: Tomography

Wohlfarth JC, Feldmuller M, Schneller A, Kilcher S, Burkolter M, Meile S, Pilhofer M, Schuppler M, Loessner MJ

Nat Microbiol (2023) 8 pp. 387-399 [ DOI: doi:10.1038/s41564-022-01317-3 Pubmed: 36717719 ]

Sort by: Download
Showing 1 - 10 of 23. Page 1 of 3
Display:
Statistics
×

Download











































Preview first 10
Download

Filter By

Current Database

  • EMDB [23]

Current status

  • REL [23]

Sample type

  • Complex [16]
  • Protein [16]
  • Ligand [12]
  • Cell [6]
  • RNA [2]
  • Sample [1]

Organism

  • Listeria monocytogenes [23]
  • Listeria monocytogenes [3]
  • Pediococcus acidilactici [2]
  • Lactococcus garvieae [1]
  • Latilactobacillus sakei [1]

EM Method

  • Single-particle [17]
  • Tomography [6]

Resolution

  • ≥ 2Å and < 3Å [10]
  • ≥ 3Å and < 4Å [6]
  • ≥ 12Å and < 16Å [1]

Model molecular weight

  • 50-100 kDa [3]
  • 100-250 kDa [4]
  • 250-500 kDa [2]
  • 500-1000 kDa [2]
  • 1-2 MDa [3]

Release Date

  • 2025 [6]
  • 2024 [1]
  • 2023 [7]
  • 2022 [5]
  • 2021 [2]
  • 2019 [1]
  • 2011 [1]

Author by name

  • Wang JW [7]
  • Burkolter M [6]
  • Feldmueller M [6]
  • Feldmuller M [6]
  • Kilcher S [6]
  • Loessner M [6]
  • Loessner MJ [6]
  • Meile S [6]
  • Pilhofer M [6]
  • Schneller A [6]
  • Schuppler M [6]
  • Wang J [6]
  • Wohlfarth JC [6]
  • Atkinson GC [3]
  • Bulvas O [3]
  • Crowe-mcauliffe C [3]
  • Ge X [3]
  • Gu Z [3]
  • Gu ZW [3]
  • Hauryliuk V [3]
  • Johansson J [3]
  • Julius C [3]
  • Koller TO [3]
  • Kurata T [3]
  • Nakamoto JA [3]
  • Roghanian M [3]
  • Turnbull KJ [3]
  • Vaitkevicius K [3]
  • Wilson DN [3]
  • Zeng J [3]
  • Zhu L [3]
  • Andersson M [2]
  • Borgnia MJ [2]
  • Brennan RG [2]
  • Dopkins B [2]
  • Lent N [2]
  • Levantino M [2]
  • Magkakis K [2]
  • Nguyen VD [2]
  • Oradd F [2]
  • Peck J [2]
  • Peck JV [2]
  • Pounot K [2]
  • Prabudiansyah I [2]
  • Salinas R [2]
  • Schumacher MA [2]
  • Travis BA [2]
  • Wang C [2]
  • Basse Hansen S [1]
  • Boettcher T [1]
  • Braun N [1]
  • Cossart P [1]
  • Costa TRD [1]
  • Flygaard RF [1]
  • Flygaard RK [1]
  • Hansen SB [1]
  • Kastenmueller A [1]
  • Kjaergaard M [1]
  • Nissen P [1]
  • Redzej A [1]
  • Rifflet A [1]
  • Rolhion N [1]
  • Sieber S [1]
  • Waksman G [1]
  • Weinkauf S [1]
  • Williams AH [1]
  • Zeiler E [1]
  • Zeng JW [1]
  • Zhu LY [1]

Author by ORCID

  • Meile S [6]
  • Wang J [6]
  • Burkolter M [6]
  • Kilcher S [6]
  • Feldmuller M [6]
  • Pilhofer M [6]
  • Loessner MJ [6]
  • Turnbull KJ [3]
  • Johansson J [3]
  • Julius C [3]
  • Atkinson GC [3]
  • Zeng J [3]
  • Koller TO [3]
  • Crowe-mcauliffe C [3]
  • Hauryliuk V [3]
  • Wilson DN [3]
  • Bulvas O [3]
  • Ge X [3]
  • Zhu L [3]
  • Gu Z [3]
  • Prabudiansyah I [2]
  • Brennan RG [2]
  • Salinas R [2]
  • Borgnia MJ [2]
  • Oradd F [2]
  • Levantino M [2]
  • Andersson M [2]
  • Schumacher MA [2]
  • Pounot K [2]
  • Magkakis K [2]
  • Wang JW [1]
  • Rolhion N [1]
  • Flygaard RK [1]
  • Kjaergaard M [1]
  • Boettcher T [1]
  • Nissen P [1]
  • Redzej A [1]
  • Costa TRD [1]
  • Basse Hansen S [1]

Journal

  • NAT COMMUN [6]
  • NAT MICROBIOL [6]
  • APPL ENVIRON MICROBIOL [3]
  • NUCLEIC ACIDS RES [3]
  • SCI ADV [2]
  • ANGEW CHEM INT ED ENGL [1]
  • EMBO REP [1]
  • TO BE PUBLISHED [1]

Software

  • RELION [4]
  • CRYOSPARC [3]
  • CTFFIND [1]
  • IMAGIC [1]

Microscope

  • FEI TITAN KRIOS [18]
  • FEI TALOS ARCTICA [2]
  • FEI TECNAI F30 [1]
  • JEOL 100CX [1]
  • TFS KRIOS [1]

Electron Source

  • FIELD EMISSION GUN [20]
  • LAB6 [1]
  • OTHER [1]
  • TUNGSTEN HAIRPIN [1]

Film or detector model

  • GATAN K2 SUMMIT 4K X 4K [9]
  • GATAN K3 6K X 4K [5]
  • GATAN K3 BIOQUANTUM 6K X 4K [5]
  • FEI FALCON IV 4K X 4K [2]
  • GATAN K2 QUANTUM 4K X 4K [1]

External links

  • AlphaFold DB [14]
  • PDB [14]
  • PDBe-Kb [14]
  • UniProt [14]
  • Pfam [13]
  • ChEBI [12]
  • InterPro [12]
  • Gene Ontology [10]
  • DrugBank [9]
  • ChEMBL [7]
  • EMPIAR [3]