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natural_source_ncbi_code:"155892"

Filter By

Current Database

  • EMDB [24]

Current status

  • REL [24]

Sample type

  • Complex [18]
  • Protein [15]
  • Cell [3]
  • Cellular component [3]
  • Ligand [2]
  • Sample [2]

Organism

  • Caulobacter vibrioides [24]
  • (no species) [10]
  • Cebevirus halophobicum [2]

EM Method

  • Single-particle [13]
  • Tomography [8]
  • Helical reconstruction [2]
  • Subtomogram averaging [1]

Resolution

  • ≥ 2Å and < 3Å [2]
  • ≥ 3Å and < 4Å [3]
  • ≥ 4Å and < 5Å [6]
  • ≥ 5Å and < 6Å [2]
  • ≥ 6Å and < 8Å [2]
  • ≥ 30Å [1]

Model molecular weight

  • 0-50 kDa [1]
  • 100-250 kDa [2]
  • 250-500 kDa [2]
  • 500-1000 kDa [4]
  • 1-2 MDa [3]
  • 2-5 MDa [1]

Release Date

  • 2025 [5]
  • 2024 [3]
  • 2023 [11]
  • 2022 [1]
  • 2021 [1]
  • 2020 [1]
  • 2014 [1]
  • 2011 [1]

Author by name

  • Lowe J [12]
  • Liu Y [10]
  • Van Den Ent F [10]
  • Boeynaems S [5]
  • Boyd T [5]
  • Deniz AA [5]
  • Holehouse AS [5]
  • Khan A [5]
  • Lander GC [5]
  • Lasker K [5]
  • Latham AP [5]
  • Park D [5]
  • Salazar A [5]
  • Sali A [5]
  • Scholl D [5]
  • Bharat TAM [3]
  • Narsaria U [3]
  • Theodore M [3]
  • Wang Y [3]
  • Xing Z [3]
  • Yu Z [3]
  • Zeng L [3]
  • Zhang J [3]
  • Baumgardt JK [1]
  • Beeby M [1]
  • Boehning J [1]
  • Bohning J [1]
  • Briegel A [1]
  • Chen S [1]
  • Chiu W [1]
  • Collins SM [1]
  • Craig L [1]
  • Dahlberg PD [1]
  • Dobro MJ [1]
  • Duman R [1]
  • Egelman EH [1]
  • El Omari K [1]
  • Garman EF [1]
  • Hendrixson DR [1]
  • Herdman M [1]
  • Jensen GJ [1]
  • Kjaer A [1]
  • Kolokouris D [1]
  • Kundra S [1]
  • Kureisaite-ciziene D [1]
  • Leadbetter JR [1]
  • Li Z [1]
  • Mitchell P [1]
  • Mitchell PG [1]
  • Moerner WE [1]
  • Muller A [1]
  • Murphy GE [1]
  • Sanchez JC [1]
  • Sartor AM [1]
  • Saurabh S [1]
  • Shapiro L [1]
  • Shi J [1]
  • Sonani RR [1]
  • Stansfeld PJ [1]
  • Szwedziak P [1]
  • Tocheva EI [1]
  • Tsim M [1]
  • Wagner A [1]
  • Wang J [1]
  • Wang Q [1]
  • Wright ER [1]
  • Von Kugelgen A [1]

Author by ORCID

  • Lowe J [11]
  • Yu Z [3]
  • Bharat TAM [3]
  • Zhang J [3]
  • Wang Y [3]
  • Zeng L [3]
  • Theodore M [3]
  • Xing Z [3]
  • Beeby M [1]
  • Garman EF [1]
  • Hendrixson DR [1]
  • Craig L [1]
  • Wagner A [1]
  • Von Kugelgen A [1]
  • Wang J [1]
  • Herdman M [1]
  • Kjaer A [1]
  • Moerner WE [1]
  • Mitchell PG [1]
  • Szwedziak P [1]
  • Sonani RR [1]
  • Dobro MJ [1]
  • Leadbetter JR [1]
  • Saurabh S [1]
  • Chiu W [1]
  • Wright ER [1]
  • Briegel A [1]
  • Kolokouris D [1]
  • Dahlberg PD [1]
  • Egelman EH [1]

Journal

  • PNAS [12]
  • TO BE PUBLISHED [10]
  • SCI ADV [3]
  • STRUCTURE [2]
  • ELIFE [1]
  • EMBO J [1]

Software

  • RELION [11]
  • CRYOSPARC [10]
  • IMOD [2]
  • CTFFIND [1]
  • IMOD, BSOFT [1]
  • IMOD, TOMO3D [1]

Microscope

  • FEI TITAN KRIOS [16]
  • TFS KRIOS [7]
  • FEI POLARA 300 [1]

Electron Source

  • FIELD EMISSION GUN [24]

Film or detector model

  • GATAN K3 6K X 4K [14]
  • FEI FALCON IV 4K X 4K [5]
  • GATAN K2 SUMMIT 4K X 4K [3]
  • GATAN K2 4K X 4K [1]
  • GATAN ULTRASCAN 1000 2K X 2K [1]

External links

  • PDB [13]
  • UniProt [13]
  • PDBe-Kb [5]
  • Pfam [5]
  • AlphaFold DB [4]
  • InterPro [4]
  • ChEBI [2]
  • DrugBank [2]
  • EMPIAR [2]
  • Gene Ontology [2]
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Showing 1 - 10 of 24. Page 1 of 3
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EMD-47558
Download Map
3D View
Representative tomogram of Caulobacter crescentus with DL6-PopZ
Release date: Nov. 5, 2025
EM Method: Tomography

Scholl D, Boyd T, Latham AP, Salazar A, Khan A, Boeynaems S, Holehouse AS, Lander GC, Sali A, Park D, Deniz AA, Lasker K

To Be Published

EMD-47539
Download Map
3D View
Representative tomogram of WT-PopZ condensate
Release date: Sept. 10, 2025
EM Method: Tomography

Scholl D, Boyd T, Latham AP, Salazar A, Khan A, Boeynaems S, Holehouse AS, Lander GC, Sali A, Park D, Deniz AA, Lasker K

To Be Published

EMD-47540
Download Map
3D View
Representative tomogram of OD-PopZ condensate
Release date: Sept. 10, 2025
EM Method: Tomography

Scholl D, Boyd T, Latham AP, Salazar A, Khan A, Boeynaems S, Holehouse AS, Lander GC, Sali A, Park D, Deniz AA, Lasker K

To Be Published

EMD-47542
Download Map
3D View
Representative tomogram of DL6-PopZ condensate
Release date: Sept. 10, 2025
EM Method: Tomography

Scholl D, Boyd T, Latham AP, Salazar A, Khan A, Boeynaems S, Holehouse AS, Lander GC, Sali A, Park D, Deniz AA, Lasker K

To Be Published

EMD-47557
Download Map
3D View
Representative tomogram of Caulobacter crescentus with WT-PopZ
Release date: Sept. 10, 2025
EM Method: Tomography

Scholl D, Boyd T, Latham AP, Salazar A, Khan A, Boeynaems S, Holehouse AS, Lander GC, Sali A, Park D, Deniz AA, Lasker K

To Be Published

EMD-41844
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3D View
Cryo-EM structure of C.crescentus bNY30a pilus complex
Release date: May 15, 2024
Resolution: 2.8 Å
EM Method: Helical reconstruction
Fitted PDBs: 8u2b
Q-score: 0.521

Wang Y, Theodore M, Xing Z, Narsaria U, Yu Z, Zeng L, Zhang J

Sci Adv (2024) 10 pp. eadl4450-eadl4450 [ Pubmed: 38701202 DOI: doi:10.1126/sciadv.adl4450 ]

EMD-42136
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3D View
PhiCb5 maturation protein with Caulobacter crescentus bNY30a pili
Release date: May 15, 2024
Resolution: 6.45 Å
EM Method: Single-particle
Fitted PDBs: 8ucr
Q-score: 0.158

Wang Y, Theodore M, Xing Z, Narsaria U, Yu Z, Zeng L, Zhang J

Sci Adv (2024) 10 pp. eadl4450-eadl4450 [ Pubmed: 38701202 DOI: doi:10.1126/sciadv.adl4450 ]

EMD-42163
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3D View
ssRNA phage PhiCb5 virion
Release date: May 15, 2024
Resolution: 2.7 Å
EM Method: Single-particle
Fitted PDBs: 8uej
Q-score: 0.449

Wang Y, Theodore M, Xing Z, Narsaria U, Yu Z, Zeng L, Zhang J

Sci Adv (2024) 10 pp. eadl4450-eadl4450 [ Pubmed: 38701202 DOI: doi:10.1126/sciadv.adl4450 ]

EMD-41815
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3D View
Raw data
EMPIAR-11982
Cryo-EM of Caulobacter crescentus Tad pilus
Release date: Dec. 6, 2023
Resolution: 3.5 Å
EM Method: Helical reconstruction
Fitted PDBs: 8u1k
Q-score: 0.457

Sonani RR, Sanchez JC, Baumgardt JK, Kundra S, Wright ER, Craig L, Egelman EH

PNAS (2023) 120 pp. e2316668120-e2316668120 [ DOI: doi:10.1073/pnas.2316668120 Pubmed: 38011558 ]

EMD-15395
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3D View
Cryo-EM structure of crescentin filaments stutter mutant, C1 symmetry and small box
Release date: Aug. 16, 2023
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 8afe
Q-score: 0.384

Liu Y, van den Ent F, Lowe J

PNAS (2024) 121 pp. e2309984121-e2309984121 [ DOI: doi:10.1073/pnas.2309984121 Pubmed: 38324567 ]

Sort by: Download
Showing 1 - 10 of 24. Page 1 of 3
Display:
Statistics
×

Download











































Preview first 10
Download

Filter By

Current Database

  • EMDB [24]

Current status

  • REL [24]

Sample type

  • Complex [18]
  • Protein [15]
  • Cell [3]
  • Cellular component [3]
  • Ligand [2]
  • Sample [2]

Organism

  • Caulobacter vibrioides [24]
  • (no species) [10]
  • Cebevirus halophobicum [2]

EM Method

  • Single-particle [13]
  • Tomography [8]
  • Helical reconstruction [2]
  • Subtomogram averaging [1]

Resolution

  • ≥ 2Å and < 3Å [2]
  • ≥ 3Å and < 4Å [3]
  • ≥ 4Å and < 5Å [6]
  • ≥ 5Å and < 6Å [2]
  • ≥ 6Å and < 8Å [2]
  • ≥ 30Å [1]

Model molecular weight

  • 0-50 kDa [1]
  • 100-250 kDa [2]
  • 250-500 kDa [2]
  • 500-1000 kDa [4]
  • 1-2 MDa [3]
  • 2-5 MDa [1]

Release Date

  • 2025 [5]
  • 2024 [3]
  • 2023 [11]
  • 2022 [1]
  • 2021 [1]
  • 2020 [1]
  • 2014 [1]
  • 2011 [1]

Author by name

  • Lowe J [12]
  • Liu Y [10]
  • Van Den Ent F [10]
  • Boeynaems S [5]
  • Boyd T [5]
  • Deniz AA [5]
  • Holehouse AS [5]
  • Khan A [5]
  • Lander GC [5]
  • Lasker K [5]
  • Latham AP [5]
  • Park D [5]
  • Salazar A [5]
  • Sali A [5]
  • Scholl D [5]
  • Bharat TAM [3]
  • Narsaria U [3]
  • Theodore M [3]
  • Wang Y [3]
  • Xing Z [3]
  • Yu Z [3]
  • Zeng L [3]
  • Zhang J [3]
  • Baumgardt JK [1]
  • Beeby M [1]
  • Boehning J [1]
  • Bohning J [1]
  • Briegel A [1]
  • Chen S [1]
  • Chiu W [1]
  • Collins SM [1]
  • Craig L [1]
  • Dahlberg PD [1]
  • Dobro MJ [1]
  • Duman R [1]
  • Egelman EH [1]
  • El Omari K [1]
  • Garman EF [1]
  • Hendrixson DR [1]
  • Herdman M [1]
  • Jensen GJ [1]
  • Kjaer A [1]
  • Kolokouris D [1]
  • Kundra S [1]
  • Kureisaite-ciziene D [1]
  • Leadbetter JR [1]
  • Li Z [1]
  • Mitchell P [1]
  • Mitchell PG [1]
  • Moerner WE [1]
  • Muller A [1]
  • Murphy GE [1]
  • Sanchez JC [1]
  • Sartor AM [1]
  • Saurabh S [1]
  • Shapiro L [1]
  • Shi J [1]
  • Sonani RR [1]
  • Stansfeld PJ [1]
  • Szwedziak P [1]
  • Tocheva EI [1]
  • Tsim M [1]
  • Wagner A [1]
  • Wang J [1]
  • Wang Q [1]
  • Wright ER [1]
  • Von Kugelgen A [1]

Author by ORCID

  • Lowe J [11]
  • Yu Z [3]
  • Bharat TAM [3]
  • Zhang J [3]
  • Wang Y [3]
  • Zeng L [3]
  • Theodore M [3]
  • Xing Z [3]
  • Beeby M [1]
  • Garman EF [1]
  • Hendrixson DR [1]
  • Craig L [1]
  • Wagner A [1]
  • Von Kugelgen A [1]
  • Wang J [1]
  • Herdman M [1]
  • Kjaer A [1]
  • Moerner WE [1]
  • Mitchell PG [1]
  • Szwedziak P [1]
  • Sonani RR [1]
  • Dobro MJ [1]
  • Leadbetter JR [1]
  • Saurabh S [1]
  • Chiu W [1]
  • Wright ER [1]
  • Briegel A [1]
  • Kolokouris D [1]
  • Dahlberg PD [1]
  • Egelman EH [1]

Journal

  • PNAS [12]
  • TO BE PUBLISHED [10]
  • SCI ADV [3]
  • STRUCTURE [2]
  • ELIFE [1]
  • EMBO J [1]

Software

  • RELION [11]
  • CRYOSPARC [10]
  • IMOD [2]
  • CTFFIND [1]
  • IMOD, BSOFT [1]
  • IMOD, TOMO3D [1]

Microscope

  • FEI TITAN KRIOS [16]
  • TFS KRIOS [7]
  • FEI POLARA 300 [1]

Electron Source

  • FIELD EMISSION GUN [24]

Film or detector model

  • GATAN K3 6K X 4K [14]
  • FEI FALCON IV 4K X 4K [5]
  • GATAN K2 SUMMIT 4K X 4K [3]
  • GATAN K2 4K X 4K [1]
  • GATAN ULTRASCAN 1000 2K X 2K [1]

External links

  • PDB [13]
  • UniProt [13]
  • PDBe-Kb [5]
  • Pfam [5]
  • AlphaFold DB [4]
  • InterPro [4]
  • ChEBI [2]
  • DrugBank [2]
  • EMPIAR [2]
  • Gene Ontology [2]